New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 2991583 | 40 (0.920) | 10 (0.240) | 9/240 | NT | 17.6% | intergenic (‑61/+14) | vgrG‑I/hcpC‑I | type VI secretion system protein/hemolysin‑coregulated protein |
? | NC_002947 | 4611123 = | 56 (1.370) | intergenic (+39/‑2068) | hcpC‑II/PP_4084 | hemolysin‑coregulated protein/hypothetical protein |
AACTACACCCAGCTGGTTGAAGTATCGCTGGCGTATCGAAAGATCACGTGGGCTCACGATGTAGCCAATACCGAAGGCTCTGACGACTGGCGCGCACCCGCCGCCTGACCCGTGCAAATGCCCCGGGCAGGCCATGCCCGCCCGGGC‑TTTGTGTTGATTCAGACGGCGGACAAGGATCTTTTATGCCTAGCCAATCTGATTTGCGCTACAGCTTTGAGGCACTCGTTGGCAAAGCTGAATTCGAAGTGGTGTCGTTCGAACTCCGCGAGGGCATCAGCGCACCCTTTGAATTGGAG > NC_002947/4610977‑4611272 | aaCTACACCCAGCTGGTTGAAGTATCGCTGGCGTATCGAAAGATCACGTGGGCTCACGATGTAGCCAATACCGAAGGCTCTGACGACTGGCGCGCACCCGCCGCCTGACCCGTGCAAATGCCCCGGGCAGGCCATGCCCGCCCGGGC‑ttt < 1:983587/150‑1 (MQ=39) cTACACCCAGCTGGTTGAAGTATCGCTGGCGTATCGAAAGATCACGTGGGCTCACGATGTAGCCAATACCGAAGGCTCTGACGACTGGCGCGCACCCGCCGCCTGACCCGTGCAGATGCCCCGGGCAGGCCATGCCCGCCCGGGC‑TTtgt > 2:780453/1‑150 (MQ=255) cacCCAGCTGGTTGAAGTATCGCTGGCGTATCGAAAGATCACGTGGGCTCACGATGTAGCCAATACCGAAGGCTCTGACGACTGGCGCGCACCCGCCGCCTGACCCGTGCAGATGCCCCGGGCAGGCCATGCCCGCCCGGGC‑TTTGTGtt < 1:780453/150‑1 (MQ=255) gccATCTGGTTGAAGTATCGCTGGCGTATCGAAAGATCACGTGGGCTCACGATGTAGCCAATACCGAAGGCTCTGACGACTGGCGCGCACCCGCCGCCTGACCCGTGCAAATGCCCCGGGCAGGCCATGCCCGCCCGGGC‑TTTGTGTTGa < 1:385498/149‑1 (MQ=25) cccAGCTGGTTGAAGTATCGCTGGCGTATCGAAAGATCACGTGGGCTCACGATGTAGCCAATACCGAAGGCTCTGACGACTGGCGCGCACCCGCCGCCTGACCCGTGCAAATGCCCCGGGCAGGCCATGCCCGGCCGGGC‑TTTGTGTTGa < 1:587590/150‑1 (MQ=38) ccAGCTGGTTGAAGTATCGCTGGCGTATCGAAAGATCACGTGGGCTCACGATGTAGCCAATACCGAAGGCTCTGACGACTGGCGCGCACCCGCCGCCTGACCCGTGCAAATGCCCCGGGCAGGCCATGCCCGCCCGGGC‑TTTGTGTTGAt > 2:431566/1‑150 (MQ=38) ccAGCTGGTTGAAGTATCGCTGGCGTATCGAAAGATCACGTGGGCTCACGATGTAGCCAATACCGAAGGCTCTGACGACTGGCGCGCACCCGCCGCCTGACCCGTGCAAATGCCCCGGGCAGGCCATGCCCGCCCGGGC‑TTTGTGTTGAt < 1:112336/150‑1 (MQ=39) ccAGCTGGTTGAAGTATCGCTGGCGTATCGAAAGATCACGTGGGCTCACGATGTAGCCAATACCGAAGGCTCTGACGACTGGCGCGCACCCGCCGCCTGACCCGTGCAAATGCCCCGGGCAGGCCATGCCCGCCCGGGC‑TTTGTGTTGAt > 2:112336/1‑150 (MQ=38) tGGTTGAAGTATCGCTGGCGTATCGAAAGATCACGTGGGCTCACGATGTAGCCAATACCGAAGGCTCTGACGACTGGCGCGCACCCGCCGCCTGACCCGTGCAAATGCCCCGGGCAGGCCATGCCCGCCCGGGC‑TTTGTGTTGATTCAGa < 1:101615/150‑1 (MQ=35) gTTGAAGTATCGCTGGCGTATCGAAAGATCACGTGGGCTCACGATGTAGCCAATACCGAAGGCTCTGACGACTGGCGCGCACCCGCCGCCTGACCCGTGCAAATGCCCCGGGCAGGCCATGCCCGCCCGGGC‑TTTGTGTTGATTCAGAcg > 1:51406/1‑150 (MQ=34) cacttcgaatgcagctttgccaacgagtgcctcaaagctgtagcgcaaatcagattggctaggcataaaagatccttgtccgccgtctgaatcaacacaaagcccgggcaggccatgcccgcccgggC‑TTTGTGTTGATTCAGAcggcgg > 1:694122‑M2/128‑150 (MQ=255) acttcgaatgcagctttgccaacgcgtgcctctaagctgtagcgcaaatcagattggctaggcataaaagatccttgtccgccgtctgaatcaacacaaagcccgggcaggccatgcccgcccgggC‑TTTGTGTTGATTCAGACGGCGGa < 2:694122‑M2/24‑1 (MQ=255) aGTATCGCTGGCGTATCGAAAGATCACGTGGGCTCACGATGTAGCCAATACCGAAGGCTCTGACGACTGGCGCGCACCCGCCGCCTGACCCGTGCAAATGCCCCGGGCAGGCCATGCCCGCCCGGGC‑TTTGTGTTGATTCAGACGGCGGa > 2:1093130/1‑150 (MQ=35) ggCGTATCGAAAGATCACGTGGGCTCACGATGTAGCCAATACCGAAGGCTCTGACGACTGGCGCGCACCCGCCGCCTGACCCGTGCAAATGCCCCGGGCAGGCCATGCCCGCCCGGGC‑TTTGTGTTGATTCAGACGGCGGACAAGGATCt < 2:776512/150‑1 (MQ=35) ggCGTATCGAAAGATCACGTGGGCTCACGATGTAGCCAATACCGAAGGCTCTGACGACTGGCGCGCACCCGCCGCCTGACCCGTGCAAATGCCCCGGGCAGGCCATGCCCGCCCGGGC‑TTTGTGTTGATTCAGACGGCGGACAAGGATCt < 1:344300/150‑1 (MQ=35) gCGTATCGAAAGATCACGTGGGCTCACGATGTAGCCAATACCGAAGGCTCTGACGACTGGCGCGCACCCGCCGCCTGACCCGTGCAAATGCCCCGGGCAGGCCATGCCCGCCCGGGC‑TTTGTGTTGATTCAGACGGCGGACAAGGATCtt < 1:776069/150‑1 (MQ=35) gTATCGAAAGATCACGTGGGCTCACGATGTAGCCAATACCGAAGGCTCTGACGACTGGCGCGCACCCGCCGCCTGACCCGTGCAAATGCCCCGGGCAGGCCATGCCCGCCCGGGC‑TTTGTGTTGATTCAGACGGCGGACAAGGATCtttt < 1:676414/150‑1 (MQ=34) tATCGAAAGATCACGTGGGCTCACGATGTAGCCAATACCGAAGGCTCTGACGACTGGCGCGCACCCGCCGCCTGACCCGTGCAAATGCCCCGGGCAGGCCATGCCCGCCCGGGC‑TTTGTGTTGATTCAGACGGCGGACAAGGATCTTTTa < 2:185169/150‑1 (MQ=35) tATCGAAAGATCACGTGGGCTCACGATGTAGCCAATACCGAAGGCTCTGACGACTGGCGCGCACCCGCCGCCTGACCCGTGCAAATGCCCCGGGCAGGCCATGCCCGCCCGGGC‑TTTGTGTTGATTCAGACGGCGGACAAGGATCTTTTa < 1:41360/150‑1 (MQ=35) aTCGAAAGATCACGTGGGCTCACGATGTAGCCAATACCGAAGGCTCTGACGACTGGCGCGCACCCGCCGCCTGACCCGTGCAAATGCCCCGGGCAGGCCATGCCCGCCCGGGC‑TTTGTGTTGATTCAGACGGCGGACAAGGATCTTTTAt < 1:36037/150‑1 (MQ=35) tCGAAAGATCACGTGGGCTCACGATGTAGCCAATACCGAAGGCTCTGACGACTGGCGCGCACCCGCCGCCTGACCCGTGCAAATGCCCCGGGCAGGCCATGCCCGCCCGGGC‑TTTGTGTTGATTCAGACGGCGGACAAGGATCTTTTATg < 2:716906/150‑1 (MQ=35) caacgagtgcctcaaagctgtagcgcaaatcagattggctaggcataaaagatccttgtccgccgtctgaatcaacacaaagcccgggcaggccatgcccgcccgggC‑ttt < 1:9099‑M2/4‑1 (MQ=255) caacgagtgcctcaaagctgtagcgcaaatcagattggctaggcataaaagatccttgtccgccgtctgaatcaacacaaagcccgggcaggccatgcccgcccgggC‑ttt > 2:9099‑M2/108‑111 (MQ=255) aGATCACGTGGGCTCACGATGTAGCCAATACCGAAGGCTCTGACGACTGGCGCGCACCCGCCGCCTGACCCGTGCAAATGCCCCGGGCAGGCCATGCCCGCCCGGGC‑TTTGTGTTGATTCAGACGGCGGACAAGGATCTTTTATGCCTAg < 1:113298/150‑1 (MQ=35) gATCACGTGGGCTCACGATGTAGCCAATACCGAAGGCTCTGACGACTGGCGCGCACCCGCCGCCTGACCCGTGCAAATGCCCCGGGCAGGCCATGCCCGCCCGGGC‑TTTGTGTTGATTCAGACGGCGGACAAGGATCTTTTATGCCTAGc > 2:1121449/1‑150 (MQ=35) tGGGCTCACGATGTAGCCAATACCGAAGGCTCTGACGACTGGCGCGCACCCGCCGCCTGACCCGTGCAAATGCCCCGGGCAGGCCATGCCCGCCCGGGC‑TTTGTGTTGATTCAGACGGCGGACAAGGATCTTTTATGCCTAGCCAATCTg > 2:141860/1‑150 (MQ=35) tcaaagctgtagcgcaaatcagattggctaggcataaaagatccttgtccgccgtctgaatcaacacaaagcccgggcaggccatgcccgcccgggC‑TTTGTGTTGAt > 2:793880‑M2/97‑108 (MQ=255) tcaaagctgtagcgcaaatcagattggctaggcataaaagatccttgtccgccgtctgaatcaacacaaagcccgggcaggccatgcccgcccgggC‑TTTGTGTTGAt < 1:793880‑M2/12‑1 (MQ=255) gCTCACGATGTAGCCAATACCGAAGGCTCTGACGACTGGCGCGCACCCGCCGCCTGACCCGTGCAAATGCCCCGGGCAGGCCATGCCCGCCCGGGC‑TTTGTGTTGATTCAGACGGCGGACAAGGATCTTTTATGCCTAGCCAATCTGAtt > 2:897354/1‑150 (MQ=35) cTCACGATGTAGCCAATACCGAAGGCTCTGACGACTGGCGCGCACCCGCCGCCTGACCCGTGCAAATGCCCCGGGCAGGCCATGCCCGCCCGGGC‑TTTGTGTTGATTCAGACGGCGGACAAGGATCTTTTATGCCTAGCCAATCTGAttt < 2:985122/150‑1 (MQ=35) tCACGATGTAGCCAATACCGAAGGCTCTGACGACTGGCGCGCACCCGCCAGCGGACCCGTGCAAATGCCCCGGGCAGGCCATGCCCGCCCGGGC‑TTTGTGTTGATTCAGACGGCGGACAAGGATCTTTTATGCCTCGCCAATCTGATTTg > 1:307984/1‑150 (MQ=255) aCGATGTAGCCAATACCGAAGGCTCTGACGACTGGCGCGCACCCGCCGCCTGACCCGTGCAAATGCCCCGGGCAGGCCATGCCCGCCCGGGC‑TTTGTGTTGATTCAGACGGCGGACAAGGATCTTTTATGCCTAGCCAATCTGATTTgcg > 1:618604/1‑150 (MQ=35) aCGATGTAGCCAATACCGAAGGCTCTGACGACTGGCGCGCACCCGCCGCCTGACCCGTGCAAATGCCCCGGGCAGGCCATGCCCGCCCGGGC‑TTTGTGTTGATTCAGACGGCGGACAAGGATCTTTTATGCCTAGCCAATCTGATTTgcg > 1:613922/1‑150 (MQ=35) aTGTAGCCAATACCGAAGGCTCTGACGACTGGCGCGCACCCGCCGCCTGACCCGTGCAAATGCCCCGGGCAGGCCATGCCCGCCCGGGC‑TTTGTGtt > 2:331533/1‑97 (MQ=38) aTGTAGCCAATACCGAAGGCTCTGACGACTGGCGCGCACCCGCCGCCTGACCCGTGCAAATGCCCCGGGCAGGCCATGCCCGCCCGGGC‑TTTGTGtt < 1:331533/97‑1 (MQ=39) aaTACCGAAGGCTCTGACGACTGGCGCGCACCCGCCGCCTGACCCGTGCAAATGCCCCGGGCAGGCCATGCCCGCCCGGGC‑TTTGTGTTGATTCAGACGGCGGACAAGGATCTTTTATGCCTAGCCAATCTGATTTGCGCTACAGCTTTg > 2:50949/1‑150 (MQ=34) aaTACCGAAGGCTCTGACGACTGGCGCGCACCCGCCGCCTGACCCGTGCAAATGCCCCGGGCAGGCCATGCCCGCCCGGGC‑TTTGTGTTGATTCAGACGGCGGACAAGGATCTTTTATGCCTAGCCAATCTGATTTGCGCTACAGCTTTg > 2:948535/1‑150 (MQ=35) aTACCGAAGGCTCTGACGACTGGCGCGCACCCGCCGCCTGACCCGTGCAAATGCCCCGGGCAGGCCATGCCCGCCCGGGC‑TTTGTGTTGATTCAGACGGCGGACAAGGATCTTTTATGCCTAGCCAATCTGATTTGCGCTACAGCTTTGa > 2:112959/1‑150 (MQ=33) tACCGAAGGCTCTGACGACTGGCGCGCACCCGCCGCCTGACCCGTGCAAATGCCCCGGGCAGGCCATGCCCGCCCGGGC‑TTTGTGTTGATTCAGACGGCGGACAAGGATCTTTTATGCCTAGCCAATCTGATTTGCGCTACAGCTTTGAg < 1:497682/150‑1 (MQ=33) cGAAGGCTCTGACGACTGGCGCGCACCCGCCGCCTGACCCGTGCAAATGCCCCGGGCAGGCCATGCCCGCCCGGGC‑TTTGTGTTGATTCAGACGGCGGACAAGGATCTTTTATGCCTAGCCAATCTGATTTGCGCTACAGCTTTGAGGCa < 1:798031/150‑1 (MQ=32) aGGCTCTGACGACTGGCGCGCACCCGCCGCCTGACCCGTGCAAATGCCCCGGGCAGGCCATGCCCGCCCGGGC‑TTTGTGTTGATTCAGACGGCGGACAAGGATCTTTTATGCCTAGCCAATCTGATTTGCGCTACAGCTTTGAGGCACTc < 1:948535/150‑1 (MQ=32) ctctGACGACTGGCGCGCACCCGCCGCCTGACCCGTGCAAATGCCCCGGGCAGGCCATGCCCGCCCGGGC‑TTTGTGTTGATTTAGACGGCGGACAAGGATCTTTTATGCCTAGCCaa > 1:619295/1‑117 (MQ=18) ctctGACGACTGGCGCGCACCCGCCGCCTGACCCGTGCAAATGCCCCGGGCAGGCCATGCCCGCCCGGGC‑TTTGTGTTGATTCAGACGGCGGACAAGGATCTTTTATGCCTAGCCaa < 2:619295/117‑1 (MQ=33) cgacTGGCGCGCACCCGCCGCCTGACCCGTGCAAATGCCCCGGGCAGGCCATGCCCGCCCGGGC‑TTTGTGTTGATTCAGACGGCGGACAAGGATCTTTTATGCCTAGCCAATCTGATTTGCGCTACAGCTTTGAGGCACTCGTTGGCaaa < 2:51406/150‑1 (MQ=32) cgacTGGCGCGCACCCGCCGCCTGACCCGTGCAAATGCCCCGGGCAGGCCATGCCCGCCCGGGC‑TTTGTGTTGATTCAGACGGCGGACAAGGATCTTTTATGCCTAGCCAATCTGATTTGCGCTACAGCTTTGAGGCACTCGTTGGCaaa < 1:431566/150‑1 (MQ=32) tGGCGCGCACCCGCCGCCTGACCCGTGCAAATGCCCCGGGCAGGCCATGCCCGCCCGGGC‑TTTGTGTTGATTCAGACGGCGGACAAGGATCTTTTATGCCTAGc < 2:821362/104‑1 (MQ=32) tGGCGCGCACCCGCCGCCTGACCCGTGCAAATGCCCCGGGCAGGCCATGCCCGCCCGGGC‑TTTGTGTTGATTCAGACGGCGGACAAGGATCTTTTATGCCTAGc > 1:821362/1‑104 (MQ=33) tGGCGCGCACCCGCCGCCTGACCCGTGCAAATGCCCCGGGCAGGCCATGCCCGCCCGGGC‑TTTGTGTTGATTCAGACGGCGGACAAGGATCTTTTATGCCTAGCCAAGCTGATTTGCGCTACAGCTTTGAGGCACTCGTTGGCAAAGCTg > 1:1087768/1‑150 (MQ=17) gcgcgcACCCGCCGCCTGACCCGTGAAAGTGCCCCGGGCAGGCCATGCCCGCCCGGGC‑TTTGTGTTGATTCAGACGGCGGACAAGGATCTTTTATGCCTAGCCAATCTGATTTGCGCTACAGCTTTGAGGCACTCGTTGGCAAAGCTGaa > 1:579598/1‑150 (MQ=21) gcgcACCCGCCGCCTGACCCGTGCAAATGCCCCGGGCAGGCCATGCCCGCCCGGGC‑TTTGTGTTGATTCAGACGGCGGACAAGGATCTTTTATGCCTAGCCAATCTGATTTGCGCTACAGCTTTGAGGCACTCGTTGGCAAAGCTGAAtt > 1:839786/1‑150 (MQ=35) gcgcACCCGCCGCCTGACCCGTGCAAATGCCCCGGGCAGGCCATGCCCGCCCGGGC‑TTTGTGTTGATTCAGACGGCGGACAAGGATCTTTTATGCCTAGCCAATCTGATTTGCGCTACAGCTTTGAGGCACTCGTTGGCAAAGCTGAAtt > 1:808877/1‑150 (MQ=35) ccgccgCCTGACCCGTGCAAATGCCCCGGGCAGGCCATGCCCGCCCGGGC‑TTTGTGTTGATTCAGACGGCGGACAAGGATCTTTTATGCCTAGCCaa < 1:607209/97‑1 (MQ=33) ccgccgCCTGACCCGTGCAAATGCCCCGGGCAGGCCATGCCCGCCCGGGC‑TTTGTGTTGATTCAGACGGCGGACAAGGATCTATTATGCCTAGCCaa > 2:607209/1‑97 (MQ=21) cgccgcCTGACCCGTGCAAATGCCCCGGGCAGGCCATGCCCGCCCGGGC‑TTTGTGTTGATTCAGACGGCGGACAAGGATCTTTTATGCCTAGCCAATCTGATTTGCGCTACAGCTTTGAGGCACTCGTTGGCAAAGCTGAATTCGAAgtg < 2:839786/150‑1 (MQ=35) atcaacacaaagcccgggcgggcatggcctgcccggggCATTTGTGTTGATTCAGACGGCGGACAAGGATCTTTTATGCCTAGCCAATc < 2:520993‑M2/51‑1 (MQ=255) atcaacacaaagcccgggcgggcatggcctgcccggggCATTTGTGTTGATTCAGACGGCGGACAAGGATCTTTTATGCCTAGCCAATc > 1:520993‑M2/39‑89 (MQ=255) ccGTGCAAATGCCCCGGGCAGGCCATGCCCGCCCGGGC‑TTTGTGTTGATTCAGACGGCGGACAAGGATCTTTTATGCCTAGCCAATCTGATTTGCGCTACAGCTTTGAg < 2:131897/109‑1 (MQ=31) ccGTGCAAATGCCCCGGGCAGGCCATGCCCGCCCGGGC‑TTTGTGTTGATTCAGACGGCGGACAAGGATCTTTTATGCCTAGCCAATCTGATTTGCGCTACAGCTTTGAg > 1:131897/1‑109 (MQ=31) ccGTGCAAATGCCCCGGGCAGGCCATGCCCGCCCGGGC‑TTTGTGTTGATTCAGACGGCGGACAAGGATCTTTTATGCCTAGCCAATCTGATTTGCGCTACAGCTTTGAGGCACTCGTTGGCAAAGCTGAATTCGAAGTGGTGTCGTTCGa > 1:313783/1‑150 (MQ=33) cGTGCAAATGCCCCGGGCAGGCCATGCCCGCCCGGGC‑TTTGTGTTGATTCAGACGGCGGACAAGGATCTTTTATGCCTAGCCAATCTGATTTGCGCTACAGCTTTGAGGCACTCGTTGGCAAAGCTGAATTCGAAGTGGTGTCGTTCGaa < 1:141860/150‑1 (MQ=33) tGCCCCGGGCAGGCCATGCCCGCCCGGGC‑TTTGTGTTGATTCAGACGGCGGACAAGGATCTTTTATGCCTAGCCAATCTGATTTGCGCTACAGCTTTGAGGCACTCGTTGGCAAAGCTGAATTCGAAGTGGTGTCGTTCGAACTCCGCGa < 2:808877/150‑1 (MQ=32) tGCCCCGGGCAGGCCATGCACGCCCGGGC‑TTTGTGTTGATTCAGACGGCGGACAAGGATCTTTTATGCCTAGCCAATCTGATTTGCGCTACAGCTTTGAGGCACTCGTTGGCAAAGCTGAATTCGAAGTGGTGTCGTTCGAACTCCGCGa > 1:1036659/1‑150 (MQ=17) ccgggcgggcatggcctgcccgggC‑TTTGTGTTGATTCAGACGGCGGACAAGGATCTTTTATGCCTAGCCAATCTGATTTGCGCTACAGCTTTGAGGCACTCGTTGGCAAAGCTGAATTCGAAGTGGTGTCGTTCGAACTCcgcg < 1:740317‑M2/121‑1 (MQ=255) ccgggcgggcatggcctgcccgggC‑TTTGTGTTGATTCAGACGGCGGACAAGGATCTTTTATGCCTAGCCAATCTGATTTGCGCTACAGCTTTGAGGCACTCGTTGGCAAAGCTGAATTCGAAGTGGTGTCGTTCGAACTCcgcg > 2:740317‑M2/25‑145 (MQ=255) gggcgggcatggcctgcccgggC‑TTTGTGTTGATTCAGACGGCGGACAAGGATCTTTTATGCCTAGCCAATCTGATTTGCGCTACAGCTTTg > 2:176614‑M2/23‑92 (MQ=255) gggcgggcatggcctgcccgggC‑TTTGTGTTGATTCAGACGGCGGACAAGGATCTTTTATGCCTAGCCAATCTGATTTGCGCTACAGCTTTg < 1:176614‑M2/70‑1 (MQ=255) aGGCCATGCCCGCCCGGGC‑TTTGTGTTGATTCAGACGGCGGACAAGGATCTTTTATGCCTAGCCAATCTGATTTGCGCTACAGCTTTGAGGCACTCGTTGGCAAAGCTGAATTCGAAGTGGTGTCGTTCGAACTCCGCGAGGGCATCAgc > 2:672953/1‑150 (MQ=32) cATGCCCGCCCGGGC‑TTTGTGTTGATTCAGACGGCGGACAAGGATCTTTTATGCCTAGCCAATCTGATTTGCGCTACAGCTTTGAGGCACTCGTTGGCAAAGCTGAATTCGAAGTGGTGTCGTTCGAACTCCGCGAGGGCATCAGCGCAc < 1:897354/150‑1 (MQ=32) aTGCCCGCCCGGGC‑TTTGTGTTGATTCAGACGGCGGACAAGGATCTTTTATGCCTAGCCAATCTGATTTGCGCTACAGCTTTGAGGCACTCGTTGGCAAAGCTGAATTCGAAGTGGTGTCGTTCGAACTCCGCGAGGGCATCAGCGCAcc > 1:943010/1‑150 (MQ=32) cccgcccgGGC‑TTTGTGTTGATTCAGACGGCGGACAAGGATCTTTTATGCCTAGCCAATCTGATTTGCGCTACAGCTTTGAGGCACTCGTTGGCAAAGCTGAATTCGAAGTGGTGTCGTTCGAACTCCGCGAGGGCATCAGCGCACCCtt > 1:201797/1‑150 (MQ=32) cccgcccgGGC‑TTTCTGTTGATTTAGACGGCGGACAAGGATCTTTTATGCCGAGCCAATCTGATTTGCGCTACAGCTTTGAGGCACTCGTTGGCAAAGCTGAATTCGAAGTGGTGTCGTTCGAACTCCGCGAGGGCATCAGCGCActcat < 1:587952/150‑5 (MQ=255) ccgcccgGGC‑TTTGTGTTGATTCAGACGGCGGACAAGGATCTTTTATGCCTAGCCAATCTGATTTGCGCTACAGCTTTGAGGCACTCGTTGGCAAAGCTGAATTCGAAGTGGTGTCGTTCGAACTCCGCGAGGGCATCAGCGCACCCttt < 2:337117/150‑1 (MQ=32) ccgcccgGAC‑TTTGTATTGATTCAGACGGCGGACCTGGATTTTCTATGCCTATCCAATCTGATTTGCGCTACAGCTTTGAGGCACTCGTTGGCAAAGCTGAATTCGAAGTGGTGTCGTTCGAACTCCGCGAGGGCATCAGCGCACCCttt < 2:618604/150‑1 (MQ=11) gggC‑TTTGTGTTGATTCAGACGGCGGACAAGGATCTTTTATGCCTAGCCAATCTGATTTGCGCTACAGCTTTGAGGCACTCGTTGGCAAAGCTGAATTCGAAGTGGTGTCGTTCGAACTCCGCGAGGGCATCAGCGCACCCTTTGAATTg < 1:971598‑M2/147‑1 (MQ=255) gC‑TTTGTGTTGATTCAGACGGCGGACAAGGATCTTTTATGCCTAGCCAATCTGATTTGCGCTACAGCTTTGAGGCACTCGTTGGCAAAGCTGAATTCGAAGTGGTGTCGTTCGAACTCCGCGAGGGCATCAGCGCACCCTTTGAATTGGa < 1:1121449‑M2/149‑1 (MQ=255) c‑TTTGTGTTGATTCAGACGGCGGACAAGGATCTTTTATGCCTAGCCAATCTGATTTGCGCTACAGCTTTGAGGCACTCGTTGGCAAAGCTGAATTCGAAGTGGTGTCGTTCGAACTCCGCGAGGGCATCAGCGCACCCTTTGAATTGGAg < 1:112959/150‑1 (MQ=35) | AACTACACCCAGCTGGTTGAAGTATCGCTGGCGTATCGAAAGATCACGTGGGCTCACGATGTAGCCAATACCGAAGGCTCTGACGACTGGCGCGCACCCGCCGCCTGACCCGTGCAAATGCCCCGGGCAGGCCATGCCCGCCCGGGC‑TTTGTGTTGATTCAGACGGCGGACAAGGATCTTTTATGCCTAGCCAATCTGATTTGCGCTACAGCTTTGAGGCACTCGTTGGCAAAGCTGAATTCGAAGTGGTGTCGTTCGAACTCCGCGAGGGCATCAGCGCACCCTTTGAATTGGAG > NC_002947/4610977‑4611272 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |