New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	3619529 =	31 (0.720)	3 (0.070)	3/240	NT	8.9%	coding (867/948 nt)	PP_3190	ornithine cyclodeaminase/mu‑crystallin family protein
	?	NC_002947	3619568 =	32 (0.780)					coding (828/948 nt)	PP_3190	ornithine cyclodeaminase/mu‑crystallin family protein

CAACGTTTGCGCTGACGCTGTTGTTGCCTCAGGTGCACAGGGCGGCCAAGGCGTGGCTTGCGACTTGTGCATCCTGCACTGCAACACCGGTCAGGTCCGCCAAGGTAATCTGGCTGTCGTGCTCACGCCCCTTGGCACGGCCAGCCAGCAGCGTACCCAGCTCGATCAGCTGGTTAGCGTCGATGCGGCCACAGCCGAGGGCATGGGCCACTTCGCCGTACTGGCTGCACTGGGCGATGGCGTCGACGATGATGCGGTCCGCCCTTGCCACCAGTGCCGGGTCCAGTTCCTGCT  >  NC_002947/3619420‑3619713                                                                                                                                                     |                                                                                                                                                  cAACGTTTGCGCTGACGCTGTTGTTGCCTCAGGTGCACAGGGCGGCCAAGGCGTGGCTTGCGACTTGTGCATCCTGCACTGCAACACCGGTCAGGTCCGCCAAGGTAATCTGGCTGTCGTGCTCACGCCCCTTGGCACGGCCAGCcagca                                                                                                                                                  >  2:1046683/1‑150 (MQ=255)   gcatcatcgtcgacgccatcgcccagtgcagccagcacggcgaagtggcccatgccctcggctgtggccgcatcgacgctaaccagctgatcgagctgggtacgctgCTGGCTGTCGTGCTCACGCCCCTTGGCACGGCCAGCCagcagc                                                                                                                                                >  2:312139‑M1/108‑150 (MQ=255)        tGCGCTGACGCTGTTGTTGCCTCAGGTGCACAGGGCGGCCAAGGCGTGGCTTGCGACTTGTGCATCCTGCACTGCAACACCGGTCAGGTCCGCCAAGGTAATCTGGCTGTCGTGCTCACGCCCCTTGGCACGGCCAGCCAGCAGCGTAcc                                                                                                                                           <  1:1028274/150‑1 (MQ=255)           gcTGACGCTGTTGTTGCCTCAGGTGCACAGGGCGGCCAAGGCGTGGCTTGCGACTTGTGCATCCTGCACTGCAACACCGGTCAGGTCCGCCAAGGTAATCTGGCTGTCGTGCTCACGCCCCTTGGCACGGCCAGCCAGCAGCGTACCCAg                                                                                                                                        >  1:609960/1‑150 (MQ=255)                 gCTGTTGTTGCCTCAGGTGCACAGGGCGGCCAAGGCGTGGCTTGCGACTTGTGCATCCTGCACTGCAACACCGGTCAGGTCCGCCAAGGTAATCTGGCTGTCGTGCTCACGCCCCTTGGCACGGCCAGCCagcagc                                                                                                                                                >  1:352149/1‑136 (MQ=255)                 gCTGTTGTTGCCTCAGGTGCACAGGGCGGCCAAGGCGTGGCTTGCGACTTGTGCATCCTGCACTGCAACACCGGTCAGGTCCGCCAAGGTAATCTGGCTGTCGTGCTCACGCCCCTTGGCACGGCCAGCCagcagc                                                                                                                                                <  2:352149/136‑1 (MQ=255)                  cTGTTGTTGCCTCAGGTGCACAGGGCGGCCAAGGCGTGGCTTGCGACTTGTGGATCCTGCACTGCAACACCGGTCAGGTCCGCCAAGGTAATCTGGCTGTCGTGCTCACGCCCCTTGGCACGGCCAGCCAGCAGCGTACCCAGCTCGATc                                                                                                                                 <  1:1039128/150‑1 (MQ=255)                     ttgttgCCTCAGGTGCACAGGGCGGCCAAGGCGTGGCTTGCGACTTGTGCATCCTGCACTGCAACACCGGTCAGGTCCGCCAAGGTAATCTGGCTGTCGTGCTCACGCCCCTTGGCACGGCCAGCCAGCAGCGTACCCAGCTCGATCAGc                                                                                                                              <  1:650784/150‑1 (MQ=255)                          gCCTCAGGTGCACAGGGCGGCCAAGGCGTGGCTTGCGACTTGTGCATCCTGCACTGCAACACCGGTCAGGTCCGCCAAGGTAATCTGGCTGTCGTGCTCACGCCCCTTGGCACGGCCAGCCAGCAGCGTACCCAGCTCGATCAGCTGGtt                                                                                                                         <  2:82681/150‑1 (MQ=255)                           ccTCAGGTGCACAGGGCGGCCAAGGCGTGGCTTGCGACTTGTGCATCCTGCACTGCAACACCGGTCAGGTCCGCCAAGGTAATCTGGCTGTCGTGCTCACGCCCCTTGGCACGGCCAGCCAGCAGCGTACCCAGCTCGATCAGCTGGTTa                                                                                                                        >  2:142555/1‑150 (MQ=255)                               aGGTGCACAGGGCGGCCAAGGCGTGGCTTGCGACTTGTGCATCCTGCACTGCAACACCGGTCAGGTCCGCCAAGGTAATCTGGCTGTCGTGCTCACGCCCCTTGGCACGGCCAGCCAGCAGCGTACCCAGCTCGATCAGCTGGTTAGCGt                                                                                                                    <  2:609960/150‑1 (MQ=255)                                  tGCACAGGGCGGCCAAGGCGTGGCTTGCGACTTGTGCATCCTGCACTGCAACACCGGTCAGGTCCGCCAAGGTAATCTGGCTGTCGTGCTCACGCCCCTTGGCACGGCCAGCCAGCAGCGTACCCAGCTCGATCAGCTGGTTAGCGTCGa                                                                                                                 <  1:142555/150‑1 (MQ=255)                                        gggCGGCCAAGGCGTGGCTTGCGACCTGTGCATCCTGCACTGCAACACCGGTCAGGTCCGCCAAGGTAATCTGGCTGTCGTGCTCACGCCCCTTGGCACGGCCAGCCAGCAGCGTACCCAGCTCGATCAGCTGGTTAGCGTCGATGCGGc                                                                                                           >  2:1129971/1‑150 (MQ=255)                                                   gCGTGGCTTGCGACTTGTGCATCCTGCACTGCAACACCGGTCAGGTCCGCCAAGGTAATCTGGCTGTCGTGCTCACGCCCCTTGGCACGGCCAGCCAGCAGCGTACCCAGCTCGATCAGCTGGTTAGCGTCGATGCGGCCACAGCCGAgg                                                                                                >  1:444757/1‑150 (MQ=255)                                                          ttGCGACTTGTGCATCCTGCACTGCAACACCGGTCAGGTCCGCCAAGGTAATCTGGCTGTCGTGCTCACGCCCCTTGGCACGGCCAGCCAGCAGCGTACCCAGCTCGATCAGCTGGTTAGCGTCGATGCGGCCACAGCCGAGGGCATggg                                                                                         >  2:175420/1‑150 (MQ=255)                                                          ttGCGACTTGTGCATCCTGCACTGCAACACCAGTCAGGTCCGCCAAGGTAATCTGGCTGTCGTGCTCACGCCCCTTGGCACGGCCAGCCAGCAGCGTACCCAGCTCGATCAGCTGGTTAGCGTCGATGCGGCCACAGCCGAGGGCATggg                                                                                         >  2:770246/1‑150 (MQ=255)                                                             cGACTTGTGCATCCTGCACTGCAACACCGGTCAGGTCCGCCAAGGTAATCTGGCTGTCGTGCTCACGCCCCTTGGCACGGCCAGCCAGCAGCGTACCCAGCTCGATCAGCTGGTTAGCGTCGATGCGGCCACAGCCGAGGGCATGGGCCa                                                                                      >  1:858009/1‑150 (MQ=255)                                                              gACTTGTGCATCCTGCACTGCAACACCGGTCAGGTCCGCCAAGGTAATCTGGCTGTCGTGCTCACGCCCCTTGGCACGGCCAGCCAGCAGCGTACCCAGCTCGATCAGCTGGTTAGCGTCGATGCGGCCACAGCCGAGGGCATGGGCCAc                                                                                     >  2:622314/1‑150 (MQ=255)                                                                   gtgCATCCTGCACTGCAACACCGGTCAGGTCCGCCAAGGTAATCTGGCTGTCGTGCTCACGCCCCTTGGCACGGCCAGCCAGCAGCGTACCCAGCTCGATCAGCTGGTTAGCGTCGATGCGGCCACAGCCGAGGGCATGGGCCACTTCGc                                                                                <  1:258186/150‑1 (MQ=255)                                                                          ctgcactgcaACACCGGTCAGGTCCGCCAAGGTAATCTGGCTGTCGTGCTCACGCCCCTTGGCACGGCCAGCCAGCAGCGTACCCAGCTCGATCAGCTGGTTAGCGTCGATGCGGCCACAGCCGAgg                                                                                                <  1:271468/127‑1 (MQ=255)                                                                          ctgcactgcaACACCGGTCAGGTCCGCCAAGGTAATCTGGCTGTCGTGCTAACGCCCCTTGGCACGGCCAGCCAGCAGCGTACCCAGCTCGATCAGCTGGTTAGCGTCGATGCGGCCACAGCCGAgg                                                                                                >  2:271468/1‑127 (MQ=255)                                                                           tgcactgcaACACCGGTCAGGTCCGCCAAGGTAATCTGGCTGTCGTGCTCACGCCCCTTGGCACGGCCAGCCAGCAGCGTACCCAGCTCGATCAGCTGGTTAGCGTCGATGCGGCCACAGCCTAGGGCATGGGCCACTTCGCCGTACTgg                                                                        >  2:589777/1‑150 (MQ=255)                                                                           tgcactgcaACACCGGTCAGGTCCGCCAAGGTAATCTGGCTGTCGTGCTCACGCCCCTTGGCACGGCCAGCCAGCAGCGTACCCAGCTCGATCAGCTGGTTAGCGTCGATGCGGCCACAGCCGAGGGCATGGGCCACTTCGCCGTACTgg                                                                        >  2:234791/1‑150 (MQ=255)                                                                                         ggTCAGGTCCGCCAAGGTAATCTGGCTGTCGTGCTCAAGTCCCTTGGCACGGCCAGCCAGCAGCGTACCCAGCTCGATCAGCTGGTTAGCGTCGATGCGGCCACAGCCGAGGGCATGGGCCACTTCGCCGTACTGGCTGCACTGGGCGAt                                                          <  1:673706/150‑1 (MQ=255)                                                                                                         gTAATCTGGCTGTCGTGCTCACGCCCCTTGGCACGGCCAGCCAGCAGCGTACCCAGCTCGATCAGCTGGTTAGCGTCGATGCGGCCACAGCCGAGGGCATGGGCCACTTCGCCGTACTGGCTGCACTGGGCGATGGCGTCGACGatgatg                                          <  1:604882/150‑1 (MQ=255)                                                                                                         gTAATCTGGCTGTCGTGCTCACGCCCCTTGGCACGGCCAGCCAGCAGCGTACCCAGCTCGATCAGCTGGTTAGCGTCGATGCGGCCACAGCCGAGGGCATGGGCCACTTCGCCGTACTGGCTGCACTGGGCGATGGCGTCGACGatgatg                                          <  1:1129971/150‑1 (MQ=255)                                                                                                         gTAATCTGGCTGGCGTGCTCACGCCCCTTGGCACGGCCAGCCAGCAGCGTACCCAGCTCGATCAGCTGGTTAGCGTCGATGCGGCCACAGCCGAGGGCATGGGCCACTTCGCCGTACTGGCTGCACTGGGCGATGGCGTCGACGatgatg                                          <  2:209433/150‑1 (MQ=255)                                                                                                          gctgctggctggccgtgccaaggggcgtgagcacgacagccagCAGCGTACCCAGCTCGATCAGCTGGTTAGCGTCGATGCGGCCACAGCCGAGGGCATGGGCCACTTCGCCGTGCTGGCTGCACTGGGCGATGGCGTCGACGATGATGc                                         >  2:312139‑M2/44‑150 (MQ=255)                                                                                                             tCTGGCTGTGGTGCGCCCGCCACTGGGCACGGCAAGCCAGCGGCGTCCCCAGCTCGATCAGCTGGTTAGCGTCGCTGCGGCCACGGCCGCGGGCATGGGCCACTTCGCCGTACTGGCTGCACTGGGCGATGGCGTCGACGATGATGCGGt                                      <  2:139356/150‑1 (MQ=255)                                                                                                              CTGGCTGTCGTGCTCACGCCCCTTGGCACGGCCAGCCAGCAGCGTACCCAGCTCGATCAGCTGGTTAGCGTCGATGCGGCCACAGCCGAGGGCATGGGCCACTTCGCCGTACTGGCTGCACTGGGCGATGGCGTCGACGATGATGCGGTc                                     >  2:858009‑M1/1‑150 (MQ=255)                                                                                                                   tggccgtgccaaggggcgtgagcacgacagccagCAGCGTACCCAGCTCGATCAGCTGGTTAGCGTCGATGCGGCCACAGCCGAGGGCATGGGCCACTTCGCCGTACTGGCTGCACTGGGCGATGGc                                                       >  2:142187‑M2/35‑127 (MQ=255)                                                                                                                   tggccgtgccaaggggcgtgagcacgacagccagCAGCGTACCCAGCTCGATCAGCTGGTTAGCGTCGATGCGGCCACAGCCGAGGGCATGGGCCACTTCGCCGTACTGGCTGCACTGGGCGATGGc                                                       <  1:142187‑M2/93‑1 (MQ=255)                                                                                                                     tCGTGCTCACGCCCCTTGGCACGGCCAGCCAGCAGCGTACCCAGCTCGATCAGCTGGTTAGCGTCGATGCGGCCACAGCCGAGGGCATGGGCCACTTCGCCGTACTGGCTGCACTGGGCGATGGCGTCGACGATGATGCGGTCCGCCCtt                              >  2:224872/1‑150 (MQ=255)                                                                                                                       gTGCTCACGCCCCTTGGCACGGCCAGCCAGCAGCGTACCCAGCTCGATCAGCTGGTTAGCGTCGATGCGGCCACAGCCGAGGGCATGGGCCACTTCGCCGTACTGGCTGCACTGGGCGATGGCGTCGACGATGATGCGGTCCGCCCTTGc                            >  1:897788/1‑150 (MQ=255)                                                                                                                            cACGCCCCTTGGCACGGCCAGCCAGCAGCGTACCCAGCTCGATCAGCTGGTTAGCGTCGATGCGGCCACAGCCGAGGGCATGGGCCACTTCGCCGTACTGGCTGCACTGGGCGATCTCGTCGACGATGATGCGGTCCGCCCTTGccacca                       <  1:933280/150‑1 (MQ=255)                                                                                                                             aCGCCCCTTGGCACGGCCAGCCAGCAGCGTACCCAGCTCGATCAGCTGGTTAGCGTCGATGCGGCCACAGCCGAGGGCATGGGCCACTTCGCCGTACTGGCTGCACTGGGCGATGGCGTcgacga                                               >  2:25972/1‑125 (MQ=255)                                                                                                                             aCGCCCCTTGGCACGGCCAGCCAGCAGCGTACCCAGCTCGATCAGCTGGTTAGCGTCGATGCGGCCACAGCCGAGGGCATGGGCCACTTCGCCGTACTGGCTGCACTGGGCGATGGCGTcgacga                                               <  1:25972/125‑1 (MQ=255)                                                                                                                                 cccTTGGCACGGCCAGCCAGCAGCGTAGAGAGCTCGATCAGCTGGTTAGCGTCGATGCGGCCACAGCCGAGGGCATGGGCCACTTCGCCGTACTGGCTGCACTGGGCGATGGCGTCGACGATGATGCGGTCCGCCCTTGCCACCAGTGcc                  >  1:309333/1‑150 (MQ=255)                                                                                                                                 cccTTGGCACGGCCAGCCAGCAGCGTACCCAGCTCGATCAGCTGGTTAGCGTCGATGCGGCCACAGCCGAGGGCATGGGCCACTTCGCCGTACTGGCTGCACTGGGCGATGGCGTCGACGATGATGCGGTCCGCCCTTGCCACCAGTGcc                  >  1:306621/1‑150 (MQ=255)                                                                                                                                       gCACGGCCAGCCAGCAGCGTACCCAGCTCGATCAGCTGGTTAGCGTCGATGCGGCCACAGCCGAGGGCATGGGCCACTTCGCCGTACTGGCTGCACTGGGCGATGGCGTCGACGATGATGCGGTCCGCCCTTGCCACCAGTGCCGGGTcc            >  1:483220/1‑150 (MQ=255)                                                                                                                                         aCGGCCAGCCAGCAGCGTACCCAGCTCGATCAGCTGGTTAGCGTCGATGCGGCCACAGCCGAGGGCATGGGCCACTTCGCCGTACTGGCTGCACTGGGCGATGGCGTCGACGATGATGCGGTCCGCCCTTGCCACCAGTGCCGGGTCCAg          >  2:101743/1‑150 (MQ=255)                                                                                                                                           ggCCAGCCAGCAGCGTACCCAGCTCGATCAGCTGGTTAGCGTCGATGCGGCCACAGCCGAGGGCATGGGCCACTTCGCCGTACTGGCTGCACTGGGCGATGGCGTCGACGATGATGCGGTCCGCCCTTGCCACCAGTGCCGGGTCCAGtt        >  1:378641/1‑150 (MQ=255)                                                                                                                                              cagccagCAGCGTACCCAGCTCGATCAGCTGGTTAGCGTCGATGCGGCCACAGCCGAGGGCATGGGCCACTTCGCCGTACTGGCTGCACTGGGCGATGGCGTCGACGATGATGCGGTCCGCCCTTGCCACCAGTGCCGGGTCCAGTTCCt     >  2:559012‑M2/8‑150 (MQ=255)                                                                                                                                              cagccagCAGCGTACCCAGCTCGATCAGCTGGTTAGCGTCGATGCAGCCCCACCCCAAGACATGGGCCACTTCGCCTTACTGGCTGCACTGGGCGATGGCGTCGACGATGATGCGGTCCGCCCTTGCCACCAGTGCCGGGTCCAGTTCCt     >  1:982111‑M2/8‑150 (MQ=255)                                                                                                                                                 ccagCAGCGTACCCAGCTCGATCAGCTGGTTAGCGTCGATGCGGCCACAGCCGAGGGCATGGGCCACTTCGCCGTACTGGCTGCACTGGGCGATGGCGTCGACGATGATGCGGTCCGCCCTTGCCACCAGTGCCGGGTCCAGTTCCTGCt  >  1:146704‑M2/5‑150 (MQ=255)                                                                                                                                                     |                                                                                                                                                  CAACGTTTGCGCTGACGCTGTTGTTGCCTCAGGTGCACAGGGCGGCCAAGGCGTGGCTTGCGACTTGTGCATCCTGCACTGCAACACCGGTCAGGTCCGCCAAGGTAATCTGGCTGTCGTGCTCACGCCCCTTGGCACGGCCAGCCAGCAGCGTACCCAGCTCGATCAGCTGGTTAGCGTCGATGCGGCCACAGCCGAGGGCATGGGCCACTTCGCCGTACTGGCTGCACTGGGCGATGGCGTCGACGATGATGCGGTCCGCCCTTGCCACCAGTGCCGGGTCCAGTTCCTGCT  >  NC_002947/3619420‑3619713

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.