New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 3795181	30 (0.690)	3 (0.070)	3/246	NT	9.5%	coding (1316/1884 nt)	fcs	feruloyl‑CoA‑synthetase
	?	NC_002947	= 3795221	28 (0.670)					coding (1276/1884 nt)	fcs	feruloyl‑CoA‑synthetase

CCATCGAACATCAGGCCAAGCTCGGGCTGCCTGGCATCGGCCAGCTTCAACGCGTCGCCCGAACAGTAGAAGCCCTCCTCGTCGAACGCCTCGGCGGTCTGCTGCGGCGAGCGCCAGTAGCCCGGCATGATATGCGGGCCACGGAAGCGCGCCTCGAGCTTGTCGCCCACCGGCACCAGCTTCACTTCGCAGCCAGGTGCCGGCAGCCCGACATAGCCGGCCATCGACAAAGGCCCGGTGGTGAAGGTGCACGATGGCGAGGCTTCGGTCATGCCAAGGCCGGCCATCATGCG  >  NC_002947/3795073‑3795365                                                                                                                                                     |                                                                                                                                                 ccATCGAACATCAGGCCAAGCTCGGGCTGCCTGGCATCGGCCAGCTTCAACGCGTCGCCCGAACAGTAGAAGCCCTCCTCGTCGAACGCCTCGGCGGTCTGCTGCGGCGAGCGCCAGTAGCCCGGCATGATATGCGGGCCACGGAAGCGc                                                                                                                                                 >  1:893451‑M2/1‑149 (MQ=255)    tCGAACATCAGGCCAAGCTCGGGCTGCCTGGCATCGGCCAGCTTCAACGCGTCGCCCGAACAGTAGAAGCCCTCCTCGTCGAACGCCTCGGCGGTCTGCTGCGGCGAGCGCCAGTAGCCCGGCATGATATGCGGGCCACGGAAGCGcgcc                                                                                                                                              <  1:103256‑M2/150‑5 (MQ=255)          aTCAGGCCAAGCTCGGGCTGCCTGGCATCGGCCAGCTTCAACGCGTCGCCCGAACAGTAGAAGCCCTCCTCGTCGAACGCCTCGGCGGTCTGCTGCGGCGAGCGCCAGTAGCCCGGCATGATATGCGGGCCACGGAAGCGCGCCTCGAGc                                                                                                                                        >  1:678681/1‑150 (MQ=255)          aTCAGGCCAAGCTCGGGCTGCCTGGCATCGGCCAGCTTCAACGCGTCGCCCGAACAGTAGAAGCCCTCCTCGTCGAACGCCTCGGCGGTCTGCTGCGGCGAGCGCCAGTAGCCCGGCATGATATGCGGGCCACGGAAGCGCGCCTCGAGc                                                                                                                                        >  1:388323/1‑150 (MQ=255)               gCCAAGCTCGGGCTGCCTGGCATCGGCCAGCTTCAACGCGTCGCCCGAACAGTAGAAGCCCTCCTCGTCGAACGCCTCGGCGGTCTGCTGCGGCGAGCGCCAGTAGCCCGGCATGATATGCGGGCCACGGAAGCGCGCCTCGAGCTTGTc                                                                                                                                   >  1:339063/1‑150 (MQ=255)               gCCAAGCTCGCGCTGCCTGGCATCGGCCAGCTTCAGCGCGTCGCCCGAACAGTAGAAGCCCTCCTCGTCGAACGCCTCGGCGGTCTGCTGCGGCGAGCGCCAGTAGCCCGGCATGATAGGCGGGCCACGGAAGCGCCCCTCGAGCTTGTc                                                                                                                                   >  2:12929/1‑150 (MQ=255)                          gCTGCCTGGCATCGGCCAGCTTCAACGCGTCGCCCGAACAGTAGAAGCCCTCCTCGTCGAACGCCTCGGCGGTCTGCTGCGGCGAGCGCCAGTAGCCCGGCATGATATGCGGGCCACGGAAGCGCGCCTCGAGCTTGTCGCCCAcc                                                                                                                            <  1:733623/146‑1 (MQ=255)                          gCTGCCTGGCATCGGCCAGCTTCAACGCGTCGCCCGAACAGTAGAAGCCCTCCTCGTCGAACGCCTCGGCGGTCTGCTGCGGCGAGCGCCAGTAGCCCGGCATGATATGCGGGCCACGGAAGCGCGCCTCGAGCTTGTCGCCCAcc                                                                                                                            >  2:733623/1‑146 (MQ=255)                          gCTGCCTGGCATCGGCCAGCTTCAACGCGTCGCCCGAACAGTAGAAGCCCTCCTCGTCGAACGCCTCGGCGGTCTGCTGCGGCGAGCGCCAGTAGCCCGGCATGATATGCGGGCCACGGAAGCGCGCCTCGAGCTTGTCGCCCACCGGCa                                                                                                                        >  1:1092283/1‑150 (MQ=255)                                   cATCGGCCAGCTTCAACGCGTCGCCCGAACAGTAGACGCCCTCCTCGTCGAACGCCTCGGCGGTCTGCTGCGGCGAGCGCCAGTAGCCCGGCATGATATGCGGGCCACGGAAGCGCGCCTCGAGCTTGTCGCCCACCGGCACCAGCTTCa                                                                                                               <  2:4834/150‑1 (MQ=255)                                   cATCGGCCAGCTTCAACGCGTCGCCCGAACAGTAGAAGCCCTCCTCGTCGAACGCCTCGGCGGTCTGCTGCGGCGAGCGCCAGTAGCCCGGCATGATATGCGGGCCACGGAAGCGCGCCTCGAGCTTGTCGCCCACCGGCACCAGCTTCa                                                                                                               <  1:1083577/150‑1 (MQ=255)                                                    gcgTCGCCCGAACAGTAGAAGCCCTCCTCGTCGAACGCCTCGGCGGTCTGCTGCGGCGAGCGCCAGTAGCCCGGCATGATATGCGGGCCACGGAAGCGCGCCTCGAGCTTGTCGCCCACCGGCACCAGCTTCACTTCGCAGCCAGGTGcc                                                                                              <  2:103256/150‑1 (MQ=255)                                                          cccGAACAGTAGAAGCCCTCCTCGTCGAACGCCTCGGCGGTCTGCTGCGGCGAGCGCCAGTAGCCCGGCATGATATGCGGGCCACGGAAGCGCGCCTCGAGCTTGTCGCCCACCGGCACCAGCTTCACTTCGCAGCCAGGTGCCGGCAGc                                                                                        <  2:762799/150‑1 (MQ=255)                                                          cccGAACAGTAGAAGCCCTCCTCGTCGAACGCCTCGGCGGTCTGCTGCGGCGAGCGCCAGTAGCCCGGCATGATATGCGGGCCACGGAAGCGCGCCTCGAGCTTGTCGCCCACCGGCACCAGCTTCACTTCGCAGCCAGGTGCCGGCAGc                                                                                        >  2:636175/1‑150 (MQ=255)                                                           ccGAACAGTAGAAGCCCTCCTCGTCGAACGCCTCGGCGGTCTGCTGCGGCGAGCGCCAGTAGCCCGGCATGATATGCGGGCCACGGAAGCGCGCCTc                                                                                                                                            >  1:73280/1‑97 (MQ=255)                                                           ccGAACAGTAGAAGCCCTCCTCGTCGAACGCCTCGGCGGTCTGCTGCGGCGAGCGCCAGTAGCCCGGCATGATATGCGGGCCACGGAAGCGCGCCTc                                                                                                                                            <  2:73280/97‑1 (MQ=255)                                                              aaCAGTAGAAGCCCTCCTCGTCGAACGCCTCGGCGGTCTGCTGCGGCGAGCGCCAGTAGCCCGGCATGATATGCGGGCCACGGAAGCGCGCCTCGAGCTTGTCGCCCACCGGCACCAGCTTCACTTCGCAGCCAGGTGCCGGCAGCCCGa                                                                                    >  1:83854/1‑150 (MQ=255)                                                                              ctcGTCGAACGCCTCGGCGGTCTGCTGCGGCGAGCGCCAGTAGCCCGGCATGATATGCGGGCCACGGAAGCGCGCCTCGAGCTTGTCGCCCACCGGCACCAGCTTCACTTCGCAGCCAGGTGCCGGCAGCCCGACATAGCCGGCCATCGa                                                                    <  2:39905/150‑1 (MQ=255)                                                                              ctcGTCGAACGCCTCGGCGGTCTGCTGCGGCGAGCGCCAGTAGCCCGGCATGATATGCGGGCCACGGAAGCGCGCCTCGAGCTTGTCGCCCACCGGCACCAGCTTCACTTCGCAGCCAGGTGCCGGCAGCCCGACATAGCCGGCCATCGa                                                                    >  1:935767/1‑150 (MQ=255)                                                                                 gtcgAACGCCTCGGCGGTCTGCTGCGGCGAGCGCCAGTAGCCCGGCATGATATGCGGGCCACGGAAGCGCGCCTCGAGCTTGTCGCCCACCGGCACCAGCTTCACTTCGCAGCGAGGTGCCGGCAGCCCGACATAGCCGGCCATCGACaa                                                                 >  2:399171/1‑150 (MQ=255)                                                                                      ccGCCTCGGCGGTCTGCTGCGGCGAGCGCCAGTAGCCCGGCATGATATGCGGGCCACGGAAGCGCGCCTCGAGCTTGTCGCCCACCGGCACCAGCTTCACTTCGCAGCGAGGTGCGCGCGGCCCGACATAGCCGGCCATCGACAAAGGcc                                                            >  1:588406/2‑150 (MQ=255)                                                                                          cTCGGCGGTCTGCTGCGGCGAGCGCCAGTAGCCCGGCATGATATGGCCGCTATGGGGGCGCGCCTCGAGCGTGGCGCCCACCGGCACCAGCTTACCTTCGCAGCCAGGTGCCGGCAGCCCGACATAGCCGGCCATCGACAAAGGCCCggg                                                        >  1:577757/1‑149 (MQ=255)                                                                                                     gctgcGGCGAGCGCCAGTAGCCCGGCATGATATGCGGGCCACGGAAGCGCGCCTCGAGCTTGTCGCCCACCGGCACCAGCTTCACTTCGCAGCCAGGTGCCGGCAGCCCGACATAGCCGGCCATCGACAAAGGCCCGGTGGTGAAGGTGc                                             <  1:490187/150‑1 (MQ=255)                                                                                                       tgcGGCGAGCGCCAGTAGCCCGGCATGATATGCGGGCCACGGAAGCGcgccgcagcagaccgccgaggcgttcgacgaggagggcttctactgttcgggcgacgcgttgaagctggccgatgccaggcagcccgagcttggcctgatgtt                                           <  2:1093500‑M2/150‑104 (MQ=255)                                                                                                          ggcgAGCGCCAGTAGCCCGGCATGATATGCTGGCCACGGAAGCGcgccgcagcagaccgccgaggcgttcgacgaggagggcttctactgttcgggcgacgcgttgaagctggccgatgccaggcagcccgagcttggcctgatgttcga                                        >  1:1093500‑M2/1‑44 (MQ=255)                                                                                                           gcgAGCGCCAGTAGCCCGGCATGATATGCGGGCCACGGAAGCGcgccgcagcagaccgccgaggcgttcgacgaggagggcttctactgttcgggcgacgcgttgaagctggccgatgccaggcagcccgagcttggcctgatgttcgat                                       <  2:1100291‑M2/150‑108 (MQ=255)                                                                                                           gcgAGCGCCAGTAGCCCGGCATGATATGCGGGCCACGGAAGCGCGCCTCGAGCTTGTCGCCCACCGGCACCAGCTTCACTTCGCAGCCAGGTGCCGGCAGCCCGACATAGCCGGCCATCGACAAAGGCCCGGTGGTGAAGGTGCACGATg                                       >  2:1046554/1‑150 (MQ=255)                                                                                                                             gCATGATATGCGGGCCACGGAAGCGCGCCTCGAGCTTGTCGCCCACCGGCACCAGCTTCACTTCGCAGCCAGGTGCCGGCAGCCCGACATAGCCGGCCATCGACAAAGGCCCGGTGGTGAAGGTGCACGATGGCGAGGCTTCGGTCATGc                     <  1:541089/150‑1 (MQ=255)                                                                                                                                tGATATGCGGGCCACGGAAGCGCGCCTCGAGCTTGTCGCCCACCGGCACCAGCTTCACTTCGCAGCCAGGTGCCGGCAGCCCGACATAGCCGGCCATCGACAAAGGCCCGGTGGTGAAGGTGCACGATGGCGAGGCTTCGGTCATGCCaa                  <  1:399171/150‑1 (MQ=255)                                                                                                                                 gATATGCGGGCCACGGAAGCGCGCCTCGAGCTTGTCGCCCACCGGCACCAGCTTCACTTCGCAGCCAGGTGCCGGCAGCCCGACATAGCCGGCCATCGACAAAGGCCCGGTGGTGAAGGTGCAc                                           >  2:165834/1‑124 (MQ=255)                                                                                                                                 gATATGCGGGCCACGGAAGCGCGCCTCGAGCTTGTCGCCCACCGGCACCAGCTTCACTTCGCAGCCAGGTGCCGGCAGCCCGACATAGCCGGCCATCGACAAAGGCCCGGTGGTGAAGGTGCAc                                           <  1:165834/124‑1 (MQ=255)                                                                                                                                 gATATGCGGGCCACGGAAGCGCGCCTCGAGCTTGTCGCCCACCGGCACCAGCTTCACTTCGCAGCCAGGTGCCGGCAGCCCGACATAGCCGGCCATCGACAAAGGCCCGGTGGTGAAGGTGCACGATGGCGAGGCTTCGGTCATGCCAAg                 <  2:894766/150‑1 (MQ=255)                                                                                                                                     tGCGGGCCACGGAAGCGCGCCTCGAGCTTGTCGCCCACCGGCACCAGCTTCACTTCGCAGCCAGGTGCCGGCAGCCCGACATAGCCGGCCATCGACAAAGGCCCGGTGGTGAAGGTGCACGATGGCGAGGCTTCGGTCATGCCAAggc               >  2:328509/1‑148 (MQ=255)                                                                                                                                     tGCGGGCCACGGAAGCGCGCCTCGAGCTTGTCGCCCACCGGCACCAGCTTCACTTCGCAGCCAGGTGCCGGCAGCCCGACATAGCCGGCCATCGACAAAGGCCCGGTGGTGAAGGTGCACGATGGCGAGGCTTCGGTCATGCCAAggc               <  1:328509/148‑1 (MQ=255)                                                                                                                                                gAAGCGCGCCTCGAGCTTGTCGCCCACCGGCACCAGCTTCACTTCGCAGCCAGGTGCCGGCAGCCCGACATAGCCGGCCATCGACAAAGGCCCGGTGGTGAAGGTGCACGATGGCGAGGCTTCGGTCATGCCAAGGCCGGCCATCATGCg  <  1:439795/150‑1 (MQ=255)                                                                                                                                                 gccagcgcCTCGAGCTTGTCGCCCACCGGCACCAGCTTCACTTCGCAGCCAGGTGCCGGCAGCCCGACATAGCCGGCCATCGACAAAGGCCCGGTGGTGAAGGTGCACGATGGCGAGGCTTCGGTCATGCCAAggccgg            >  2:105182/5‑139 (MQ=255)                                                                                                                                                 gccagcgcCTCGAGCTTGTCGCCCACCGGCACCAGCTTCACTTCGCAGCCAGGTGCCGGCAGCCCGACATAGCCGGCCATCGACAAAGGCCCGGTGGTGAAGGTGCACGATGGCGAGGCTTCGGTCATGCCAAggccgg            <  1:105182/135‑1 (MQ=255)                                                                                                                                                     |                                                                                                                                                 CCATCGAACATCAGGCCAAGCTCGGGCTGCCTGGCATCGGCCAGCTTCAACGCGTCGCCCGAACAGTAGAAGCCCTCCTCGTCGAACGCCTCGGCGGTCTGCTGCGGCGAGCGCCAGTAGCCCGGCATGATATGCGGGCCACGGAAGCGCGCCTCGAGCTTGTCGCCCACCGGCACCAGCTTCACTTCGCAGCCAGGTGCCGGCAGCCCGACATAGCCGGCCATCGACAAAGGCCCGGTGGTGAAGGTGCACGATGGCGAGGCTTCGGTCATGCCAAGGCCGGCCATCATGCG  >  NC_002947/3795073‑3795365

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.