New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 3989042 | 40 (0.920) | 4 (0.100) | 4/242 | NT | 9.6% | coding (1516/2085 nt) | oplA | 5‑oxoprolinase A |
? | NC_002947 | = 3989064 | 37 (0.900) | coding (1538/2085 nt) | oplA | 5‑oxoprolinase A |
TGGCCGAAGAAATTGGCATGCACACCGTGCTGATCCCCAAGGTGGCCTCGGGCTTGTGTGCGTTCGGCCAGATCCTGTCCGACGTGCGCTACGACCAGCTCACCAGCCTGTCGATGCGCCTGGACGCCGGGCACGTCGACCTGGCGCAACTCAACCAGGCCCTCGCCGAACTACGTCAGCAAGGCCTTGCCAACCTGCGCGAAGACGGCTTTGGCGACCAGGCCAGCAGTTGCCACTACACCCTGGAGATGCGCTACCTGGGGCAGATTCATGAGTGCAGTGTGGACCTGC > NC_002947/3988923‑3989213 | tGGCCGAAGAAATTGGCATGCACACCGTGCTGATCCCCAAGGTGGCCTCGGGCTTGTGTGCGTTCGGCCAGATCCTGTCCGACGTGCGCTACGACCAGCTCACCAGCCTGTCGATGCGCCTGGACGCCGGGCACGTCGACCTgg > 1:128161‑M2/1‑142 (MQ=255) tGGCCGAAGAAATTGGCATGCACACCGTGCTGATCCCCAAGGTGGCCTCGGGCTTGTGTGCGTTCGGCCAGATCCTGTCCGACGTGCGCTACGACCAGCTCACCAGCCTGTCGATGCGCCTGGACGCCGGGCACGTCGACCTgg < 2:128161‑M2/144‑3 (MQ=255) gCCGAAGAAATTGGCATGCACACCGTGCTGATCCCCAAGGTGGCCTCGGGCTTGTGTGCGTTCGGCCAGATCCTGTCCGACGTGCGCTACGACCAGCTCACCAGCCTGTCGATGCGCCTGGACGCCGGGCACGTCGACCTGGCGCAAcgc > 2:386547/1‑148 (MQ=255) gaagaaATTGGCATGCACACCGTGCTGATCCCCAAGGTGGCCTCGGGCTTGTGTGCGTTCGGCCAGATCCTGTCCGACGTGCGCTACGACCAGCTCACCAGCCTGTCGATGCGCCTGGACGCCGGGCACGTCGACCTGGCGCAACTCAAc > 2:83486/1‑150 (MQ=255) gaagaaATTGGCATGCACACCGTGCTGATCCCCAAGGTGGCCTCGGGCTTGTGTGCGTTCGGCCAGATCCTGTCCGACGTGCGCTACGACCAGCTCACCAGCCTGTCGATGCGCCTGGACGCCGGGCACGTCGACCTGGCGCAACTCAAc > 1:895242/1‑150 (MQ=255) aTGCACACCGTGCTGATCCCCAAGGTGGCCTCGGGCTTGTGTGCGTTCGGCCAGATCCTGTCCGACGTGCGCTACGACCAGCTCACCAGCCTGTCGATGCGCCTGGACGCCGGGCACGTCGACCTGGCGCAACTCAACCAGGCCCTCGcc > 2:74242/1‑150 (MQ=255) cGTGCTGATCCCCAAGGTGGCCTCGGGCTTGTGTGCGTTCGGCCAGATCCTGTCCGACGTGCGCTACGACCAGCTCACCAGCCTGTCGATGCGCCTGGACGCCGGGCACGTCGACCTGGCGCAACTCAACCAGGCCCTCGCCGAACTACg > 2:401408/1‑150 (MQ=255) tGCTGATCCCCAAGGTGGCCTCGGGCTTGTGTGCGTTCGGCCAGATCCTGTCCGACGTGCGCTACGACCAGCTCACCAGCCTGTCGATGCGCCTGGACGCCGGGCACGTCGACCTGGCGCAACTCAACCAGGCCCTCGCCGAACTACGTc < 2:283569/150‑1 (MQ=255) cccAAGGTGGCCTCGGGCTTGTGTGCGTTCGGCCAGATCCTGTCCGACGTGCGCTACGACCAGCTCACCAGCCTGTCGATGCGCCTGGACGCCGGGCACGTCGACCTGGCGCAACTCAACCAGGCCCTCGCCGAACTACGTCAGCAAGGc < 1:143813/150‑1 (MQ=255) ccAAGGTGGCCTCGGGCTTGTGTGCGTTCGGCCAGATCCTGTCCGACGTGCGCTACGACCAGCTCACCAGCCTGTCGATGCGCCTGGACGCCGGGCACGTCGACCTGGCGCAACTCAACCAGGCCCTCGCCGAACTACGTCAGCAAGGcc > 2:368984/1‑150 (MQ=255) cAAGGTGGCCACGGGCTTGTGTGCGTTCGGCCAGATCCTGTCCGACGTGCGCTACGACCAGCTCACCAGCCTGTCGATGCGCCTGGACGCCGGGCACGTCGACCTGGCGCAACTCAACCAGGCCCTCGCCGAACTACGTCAGCAAGGCCt > 2:884773/1‑150 (MQ=255) aGGTGGCCTCGGGCTTGTGTGCGTTCGGCCAGATCCTGTCCGACGTGCGCTACGACCAGCTCACCAGCCTGTCGATGCGCCTGGACGCCGGGCACGTCGACCTGCCGCAACTCAACCAGGCCCTCGCCGAACTACGTCAGCAAGGCCTTg > 1:755763/1‑150 (MQ=255) ggTGGCCTCGGGCTTGTGTGCGTTCGGCCAGATCCTGTCCGACGTGCGCTACGACCAGCTCACCAGCCTGTCGATGCGCCTGGACGCCGGGCACGTCGACTTGGCGCAACTCAACCAGGCCCTCGCCGAACTACGTCAGCAAGGCCTTGc < 1:564608/150‑1 (MQ=255) ggTGGCCTCGGGCTTGTGTGCGTTCGGCCAGATCCTGTCCGACGTGCGCTACGACCAGCTCACCAGCCTGTCGATGCGCCTGGACGCCGGGCACGTCGACCTGGCGCAACTCAACCAGGCCCTCGCCGAACTACGTCAGCAAGGCCTTGc < 2:541773/150‑1 (MQ=255) tCGGGCTTGTGTGCGTTCGGCCAGATCCTGTCCGACGTGCGCTACGACCAGCTCACCAGCCTGTCGATGCGCCTGGACGCCGGGCACGTCGACCTGGCGCAACTCAACCAGGCCCTCGCCGAACTACGTCAGCAAGGCCTTGCCACCCTg > 1:361894/1‑150 (MQ=255) gggCTTGTGTGCGTTCGGCCAGATCCTGTCCGACGTGCGCTACGACCAGCTCACCAGCCTGTCGATGCGCCTGGACGCCGGGCACGTCGACCTGGCGCAACTCAACCAGGCCCTCGCCGAACTACGTCAGCAAGGCCTTGCCAACCTgcg > 1:194238/1‑150 (MQ=255) gCTTGTGTGCGTTCGGCCAGATCCTGTCCGACGTGCGCTACGACCAGCTCACCAGCCTGTCGATGCGCCTGGACGCCGGGCACGTCGACCTGGCGCAACTCAACCAGGCCCTCGCCGAACTACGTCAGCAAGGCCTTGCCAACCTGcgcg > 2:493853/1‑150 (MQ=255) gTTCGGCCAGATCCTGTCCGACGTGCGCTACGACCAGCTCACCAGCCTGTCGATGCGCCTGGACGCCGGGCACGTCGACCCGGCGCAACTCAACCAGGCCCTCGCCGAACTACGTCAGCAAGGCCTTGCCAACCTGCGCGAAGAc > 2:511609/1‑145 (MQ=255) gTTCGGCCAGATCCTGTCCGACGTGCGCTACGACCAGCTCACCAGCCTGTCGATGCGCCTGGACGCCGGGCACGTCGACCCGGCGCAACTCAACCAGGCCCTCGCCGAACTACGTCAGCAAGGCCTTGCCAACCTGCGCGAAGAc < 1:511609/145‑1 (MQ=255) ttCGGCCAGATCCTGTCCGACGTGCGCTACGACCAGCTCACCAGCCTGTCGATGCGCCTGGACGCCGGGCACGTCGACCTGGCGCAACTCAACCAGGCCCTCGCCGAACTACGTCAGCAAGGCCTTGCCAACCTGCGCGAAGACGGCttt < 1:401408/150‑1 (MQ=255) tCGGCCAGATCATGTCCGACGCGCGCTATGACCAGCTCACCAGCCTGTCGATGCGCGTGGGTGCCGGGTACGTCGACCTGGCGCAACTCAACCAGGCCCTCGCCGAAGTACGTCAGCAAGGCCTTGACAACCTGCGCGAAGACGGCTTTg < 2:111024/150‑1 (MQ=255) ccGGCCAGGTCCGGTCCGAGGTGCGCTACGACCAGCTCACCAGCCTGTCGATGCGCCTGGACGCCGGGCACGTCGACCTGGCGCAACTCAACCAGGCCCTCGCCGAACTACGTCAGCAAGGCCTTGCCAACCGGCGCGAAGACGGCTTTg < 2:110191/149‑1 (MQ=255) ggCCAGATCCTGTCCGACGTGCGCTACGACCAGCTCACCAGCCTGTCGATGCGCCTGGACGCCGGGCACGTCGACCTGGCGCAACTCAACCAGGCCCTCGCCGAACTACGTCAGCAAGGCCTTGCCAACCTGCGCGAAGACGGCTTTGGc < 2:895242/150‑1 (MQ=255) gCCAGATCCTGTCCGACGTGCGCTACGACCAGCTCACCAGCCTGTCGATGCGCCTGGACGCCGGGCACGTCGACCTGGCGCAACTCAACCAGGCCCTCGCCGAACTACGTCAGCAAGGCCTTGCCAACCTGCGCGAAGACGGCTTTGGCg > 1:495592/1‑150 (MQ=255) ccTGTCCGACGTGCGCTACGACCAGCTCACCAGCCTGTCGATGCGCCTGGACGCCGGGCACGTCGACCTGGCGCAACTCAACCAGGCCCTCGCCGAACTACGTCAGCAAGGCCTTGCCAACCTGCGCGAAGACGGCTTTGGCGACCAGGc < 1:83486/150‑1 (MQ=255) tGTCCGACGTGCGCTACGACCAGCTCACCAGCCTGTCGATGCGCCTGGACGCCGGGCACGTCGACCTGGCGCAACTCAACCAGGCCCTCGCCGAACTACGTCAGCAAGGCCTTGCCAACCTGCGCGAAGACGGCTTTGGCGACCAGGCca > 2:761090/1‑150 (MQ=255) cGACGTGCGCTACGACCAGCTCACCAGCCTGTCGATGCGCCTGGACGCCGGGCACGTCGACCTGGCGCAACTCAACCAGGCCCTCGCCGAACTACGTCAGCAAGGCCTTGCCAACCTGCGCGAAGACGGCTTTGGCGACCAGGCcagcag > 2:859766/1‑150 (MQ=255) cGACGTGCGCTACGACCAGCTCACCAGCCTGTCGATGCGCCTGGACGCCGGGCACGTCGACCTGGCGCAACTCAACCAGGCCCTCGCCGAACTACGTCAGCAAGGCCTTGCCAACCTGCGCGAAGACGGCTTTGGCGACCAGGCcagcag < 2:361894/150‑1 (MQ=255) gcgcTACGACCAGCTCACCAGCCTGTCGATGCGCCTGGACGCCGGGCACGTCGACCTGGCGCAACTCAACCAGGCCCTCGCCGAACTACGTCAGCAAGGCCTTGCCAACCTGCGCGAAGACGGCTTTGGCGACCAGGCCAGCAGTTGCCa < 1:74242/150‑1 (MQ=255) cTACGACCAGCTCAACAGCCTGTCGATGCGCCTGGACGCCGGGCACGTCGACCTGGCGCAACTCAACCAGGCCCTCGCCGAACTACGTCAGCAAGGCCTTGCCAACCTGCGCGAAGACGGCTTTGGCGACCAGGCCAGCAGTTGCCACTa < 1:659997/150‑1 (MQ=255) tACGACCAGCTCACCAGCCTGTCGATGCGCCTGGACGCCGGGCACGTCGACCTTGCGCAACTCCACCAGGCCCTCGCCGAACTACGTCAGCAAGGCCTTGCCAACCTGCGCGAAGACGGCTTTGGCGACCAGGCCAGCAGTTGCCACTac > 2:323477/1‑150 (MQ=255) aGCTCACCAGCCTGTCGATGCGCCTGGACGCCGGGCACGTCGACCTGGCGCAACTCAACCAGGCCCTCGCCGAACTACGTCAGCAAGGCCTTGCCAACCTGCGCGAAGACGGCTTTGGCGACCAGGCCAGCAGTTGCCACTACACCCTgg < 1:368984/150‑1 (MQ=255) gCTCACCAGCCTGTCGATGCGCCTGGACGCCGGGCACGTCGACCTGGCGCAACTCAACCAGGCCCTCGCCGAACTACGTCAGCAAGGCCTTGCCAACCTGCGCGAAGACGGCTTTGGCGACCAGGCCAGCAGTTGCCACTACACCCTGga < 1:230158/150‑1 (MQ=255) cTCACCAGCCTGTCGATGCGCCTGGACGCCGGGCACGTCGACCTGGCGCAACTCAACCAGGCCCTCGCCGAACTACGTCAGCAAGGCCTTGCCAACCTGCGCGAAGACGGCTTTGGCGACCAGGCCAGCAGTTGCCACTACACCCTGgag < 2:495592/150‑1 (MQ=255) ccAGCCTGTCGATGCGCCTGGACGCCGGGCACGTCGACCTGGCGCAACTCAACCAGGCCCTCGCCGAACTACGTCAGCAAGGCCTTGCCAACCTGCGCGAAGACGGCTTTGGCGACCAGGCCAGCAGTTGCCACTACACCCTGGAGATgc < 2:194238/150‑1 (MQ=255) ccAGCCTGTCGATGCGCCTGGACGCCGGGCACGCCGACCTGGCGCAACTCAACCAGGCCCTCGCCGAACTACGTCAGCAAGGCCTTGCCAACCTGCGCGAAGACGGCTTTGGCGACCAGGCCAGCAGTTGCCACTACACCCTGGAGATgc < 1:402995/150‑1 (MQ=255) gATGCGCCTGGACGCCGGGCACGTCGACCTGGCGCAACTCAACCAGGCCCTCGCCGAACTACGTCAGCAAGGCCTTGCCAACCTGCGCGAAGACGGCTTTGGCGACCAGGCCAGCAGTTGCCACTACACCCTGGAGATGCGCTACCTggg < 1:386547/150‑1 (MQ=255) aTGCGCCTGGACGCCGGGCACGTCGACCTggcgcatcgacaggctggtgagctggtcgtagcgcacgtcggacaggatctggccgaacgcacacaagcccgaggccaccttggggatcagcacggtgtgcatgccaatttcttc < 2:422132‑M2/144‑116 (MQ=255) aTGCGCCTGGACGCCGGGCACGTCGACCTggcgcatcgacaggctggtgagctggtcgtagcgcacgtcggacaggatctggccgaacgcacacaagcccgaggccaccttggggatcagcacggtgtgcatgccaatttcttc > 1:422132‑M2/1‑29 (MQ=255) aTGCGCCTGGACGCCGGGCACGTCGACCTGGCGCAACTCAACCAGGCCCTCGCCGAACTACGTCAGCAAGGCCTTGCCAACCTGCGCGAAGACGGCTTTGGCGACCAGGCCAGCAGTTGCCACTACACCCTGGAGATGCGCTACCTgggg > 2:539285/1‑150 (MQ=255) tGCGCCTGGACGCCGGGCACGTCGACCTGGCGCAACTCAACCAGGCCCTCGCCGAACTACGTCAGCAAGGCCTTGCCAACCTGCGCGAAGACGGCTTTGGCGACCAGGCCAGCAGTTGCCACTACACCCTGGAGATGCGCTACCTGGGGc > 1:1047275/1‑150 (MQ=255) cTGGACGCCGGGCACGTCGACCTGGCGCAACTCAACCAGGCCCTCGCCGAACTACGTCAGCAAGGCCTTGCCAACCTGCGCGAAGACGGCTTTGGCGACCAGGCCAGCAGTTGCCACTACACCCTGGAGATGCGCTACCTGGGGCAGAtt < 1:859766/150‑1 (MQ=255) tGGACGCCGGGCACGTCGACCTggcgcatcgacaggctggtgagctggtcgtagcgcacgtcggac < 2:108943‑M2/66‑45 (MQ=255) tGGACGCCGGGCACGTCGACCTggcgcatcgacaggctggtgagctggtcgtagcgcacgtcggac > 1:108943‑M2/1‑22 (MQ=255) tGGCGCAACTCAACCAGGCCCTCGCCGAACTACGTCAGCAAGGCCTTGCCAACCTGCGCGAAGACGGCTTTGGCGACCAGGCCAGCAGTTGCCACTACACCCTGGAGATGCGCTACCTGGGGCAGATTCATGAGTGCAGTGTGGACCTgc < 2:1047275/150‑1 (MQ=255) | TGGCCGAAGAAATTGGCATGCACACCGTGCTGATCCCCAAGGTGGCCTCGGGCTTGTGTGCGTTCGGCCAGATCCTGTCCGACGTGCGCTACGACCAGCTCACCAGCCTGTCGATGCGCCTGGACGCCGGGCACGTCGACCTGGCGCAACTCAACCAGGCCCTCGCCGAACTACGTCAGCAAGGCCTTGCCAACCTGCGCGAAGACGGCTTTGGCGACCAGGCCAGCAGTTGCCACTACACCCTGGAGATGCGCTACCTGGGGCAGATTCATGAGTGCAGTGTGGACCTGC > NC_002947/3988923‑3989213 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |