New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 5418129	34 (0.780)	3 (0.070)	3/238	NT	8.2%	coding (990/1368 nt)	PP_4758	MFS transporter
	?	NC_002947	= 5418145	35 (0.860)					coding (974/1368 nt)	PP_4758	MFS transporter

TAGCCCTGGGGGATTGGCCAGAACAGTGACGACGCTGACTTGAAGCCGATCGCGGCGAAGCACACGGCGACGAAGGCAAACACCGGCCCACCCGTGGTGGACATGAACATGCCCGTGGCAGCGACCAGCAGGGCGCCGGCCACCCAGGCCTGCTGGAACTTCCAGCGAGCGGAACCGGCGGCGAAGGCGTACATGGCCAGGATCGAGATCAGCCAAGGGATCGAGTTGAAGAAACCGACCTGCATGTCACTGAGGTCGCCCATACGCTTGATGATGCTGGGCAGCCAGAAGGT  >  NC_002947/5417998‑5418290                                                                                                                                                    |                                                                                                                                                  tAGCCCTGGGGGATTGGCCAGAACAGTGACGACGCTGACTTGAAGCCGATCGCGGCGAAGCACACGGCGACGAAGGCAAACACCGGCCCACCCGTGGTGGACATGAACATGCCCGTGGCAGCGACCAGCAGGGCGCCGGCCACCCAGGcc                                                                                                                                                 <  2:394785‑M2/150‑3 (MQ=255)    cgcggggtgagtgGCCAGAACAGTGACGACGCTGACTTGAAGCCGATCGCGGCGAAGCACACGGCGACGAAGGCAAACACCGGCCCACCCGTGGTGGACATGAACATGCCCGTGGCAGCGACCAGCAGGGCGCCGGCCACCCAGGcctgc                                                                                                                                              >  2:737850‑M2/5‑145 (MQ=255)    cccTGGGGGATTGGCCAGAACAGTGACGACGCTGACTTGAAGCCGATCGCGGCGAAGCACACGGCGACGAAGGCAAACACCGGCCCACCCGTGGTGGACATGAACATGCCCGTGGCAGCGACCAGCAGGGCGCCGGTCACACAGGcctgc                                                                                                                                              <  1:785224‑M2/150‑6 (MQ=255)     ccTGGGGGATTGGCCAGAACAGTGACGACGCTGACTTGAAGCCGATCGCGGCGAAGCACACGGCGACGAAGGCAAACACCGGCCCACCCGTGGTGGACATGAACATGCCCGTGGCAGCGACCAGCAGGGCGCCGGCCACCCAGGcctgct                                                                                                                                             >  2:267341‑M2/1‑144 (MQ=255)         ggggATTGGGCAGAACAGTGACGACGCTGACTTGAAGCCGATCGCGGCGAAGCACACGGCGACGAAGGCAAACACCGGCCCACCCGTGGTGGACATGAACATGCCCGTGGCAGCGACCAGCAGGGCGCCGGCCACCCAGGCCTGCTGGaa                                                                                                                                         <  1:954169/150‑1 (MQ=255)         ggggATTGGCCAGAACAGTGACGACGCTGACTTGAAGCCGATCGCGGCGAAGCACACGGCGACGAAGGCAAACACCGGCCCACCCGTGGTGGACATGAACATGCCCGTGGCAGCGACCAGCAGGGCGCCGGCCACCCAGGCCTGCTGGaa                                                                                                                                         <  2:748530/150‑1 (MQ=255)                 gCCAGAACAGTGACGACGCTGACTTGAAGCCGATCGCGGCGAAGCACACGGCGACGAAGGCAAACACCGGCCCACCCGTGGTGGACATGAACATGCCCGTGGCAGCGACCAGCAGGGCGCCGGCCACCCAGGCCTGCTGGCACTTCCagg                                                                                                                                 >  2:114878/1‑149 (MQ=255)                 gCCAGAACAGTGACGACGCTGACTTGAAGCCGATCGCGGCGAAGCACACGGCGACGAAGGCAAACACCGGCCCACCCGTGGTGGACATGAACATGCCCGTGGCAGCGACCAGCAGGGCGCCGGCCACCCAGGCCTGCTGGAACTTCCagc                                                                                                                                 >  2:466929/1‑150 (MQ=255)                          gTGACGACGCTGACTTGAAGCCGATCGCGGCGAAGCACACGGCGACGAAGGCAAACACCGGCCCACCCGTGGTGGACATGAACATGCCCGTGGCAGCGACCAGCAGGGCGCCGGCCACCCAGGCCTGCTGGAACTTCCAGCGAGCGGAAc                                                                                                                        >  1:163608/1‑150 (MQ=255)                                     gACTTGAAGCCGATCGCGGCGAAGCACACGGCGACGAAGGCAAACACCGGCCCACCCGTGGTGGACATGAACATGCCCGTGGCAGCGACCAGCAGGGCGCCGGCCACCCAGGCCTGCTGGAACTTCCAGCGAGCGGAACCGGCGGCGAAg                                                                                                             <  2:898991/150‑1 (MQ=255)                                        ttGAAGCCGATCGCGGCGAAGCACACGGCGACGAAGGCAAACACCGGCCCACCCGTGGTGGACATGAACATGCCCGTGGCAGCGACCAGCAGGGCGCCGGCCACCCAGGCCTGCTGGAACTTCCAGCGAGCGGAACCGGCGGCGAAGGCg                                                                                                          >  1:1116895/1‑150 (MQ=255)                                        ttGAAGCCGATCGCGGCGAAGCACACGGCGACGAAGGCAAACACCGGCCCACCCGTGGTGGACATGAACATGCCCGTGGCAGCGACCAGCAGGGCGCCGGCCACCCAGGCCTGCTGGAACTTCCAGCGAGCGGAACCGGCGACTAAGGCg                                                                                                          >  1:597137/1‑150 (MQ=255)                                         tGAAGCCGATCGCGGCGAAGCACACGGCGACGAAGGCAAACACCGGCCCACCCGTGGTGGACATGAACATGCCCGTGGCAGCGACCAGCAGGGCGCCGGCCACCCAGGCCTGCTGGAACTTCCAGCGAGCGGAACCGGCGGCGAAGGCGt                                                                                                         <  1:394785/150‑1 (MQ=255)                                         tGAAGCCGATCGCGGCGAAGCACACGGCGACGAAGGCAAACACCGGCCCACCCGTGGTGGACATGAACATGCCCGTGGCAGCGACCAGCAGGGCGCCGGCCACCCAGGCCTGCTGGAACTTCCAGCGAGCGGAACCGGCGGCGAAGGCGt                                                                                                         <  1:391694/150‑1 (MQ=255)                                                   cgcgGCGAAGCACACGGCGACGAAGGCAAACACCGGCCCACCCGTGGTGGACATGAACATGCCCGTGGCAGCGACCAGCAGGGCGCCGGCCACCCAGGCCTGCTGGAACTTCCAGCGAGCGGAACCGGCGGCGAAGGCGTACATGGCCAg                                                                                               <  1:814037/150‑1 (MQ=255)                                                     cggcgAAGCACACGGCGACGAAGGCAAACACCGGCCCACCCGTGGTGGACATGAACATGCCCGTGGCAGCGACCAGCAGGGCGCCGGCCACCCAGGCCTGCTGGAACTTCCAGCGAGCGGAACCGGCGGCGAAGGCGTACATGGCCAGGa                                                                                             <  1:556706/150‑1 (MQ=255)                                                            gCACACGGCGACGAAGGCAAACACCGGCCCACCCGTGGTGGACATGAACATGCCCGTGGCAGCGACCAGCAGGGCGCCGGCCACCCAGGCCTGCTGGAACTTCCAGCGAGCGGAACCGGCGGCGAAGGCGTACATGGCCAGGATCGAGAt                                                                                      <  2:163608/150‑1 (MQ=255)                                                                   gCGACGAAGGCAAACACCGGCCCACCCGTGGTGGACATGAACATGCCCGTGGCAGCGACCAGCAGGGCGCCGGCCACCCAGGCCTGCTGGAACTTCCAGCGAGCGGAACCGGCGGCGAAGGCGTACATGGCCAGGATCGAGATCAGCCaa                                                                               <  2:356603/150‑1 (MQ=255)                                                                         aaGGCAAACACCGGCCCACCCGTGGTGGACATGAACATGCCCGTGGCAGCGACCAGCAGGGCGCCGGCCACCCAGGCCTGCTGGAAGTTCCag                                                                                                                                  >  1:49301/1‑93 (MQ=255)                                                                         aaGGCAAACACCGGCCCACCCGTGGTGGACATGAACATGCCCGTGGCAGCGACCAGCAGGGCGCCGGCCACCCAGGCCTGCTGGAAGTTCCag                                                                                                                                  <  2:49301/93‑1 (MQ=255)                                                                          aGGCAAACACCGGCCCACCCGTGGTGGACATGAACATGCCCGTGGCAGCGACCAGCAGGGCGCCGGCCACCCAGGCCTGCTGGAACTTCCAGCGAGCGGAACCGGCGGCGAAGGCGTACATGGCCAGGATCGAGATCAGCCAAGGGATCg                                                                        <  1:894974/150‑1 (MQ=255)                                                                            gCAAACACCGCCCCACCCGTGGTGGACATGAACATGCCCGTGGCAGCGACCAGCAGGGCGCCGGCCACCCAGGCCTGCTGGAACTTCCAGCGAGCGGAACCGGCGGCGAAGGCGTACATGGCCAGGATCGAGATCAGCCAAGGGATCGAg                                                                      <  1:498801/150‑1 (MQ=255)                                                                              aaaCACCGGCCCACCCGTGGTGGACATGAACATGCCCGTGGCAGCGACCAGCAGGGCGCCGGCCACCCAgg                                                                                                                                                   >  1:772736/1‑71 (MQ=255)                                                                              aaaCACCGGCCCACCCGTGGTGGACATGAACATGCCCGTGGCAGCGACCAGCAGGGCGCCGGCCACCCAgg                                                                                                                                                   <  2:772736/71‑1 (MQ=255)                                                                                 cacCGGCCCACCCGTGGTGGACATGAACATGCCCGTGGCAGCGACCAGCAGGGCGCCGGCCACCCAGGCCTGCTGGAACTTCCAGCGAGCGGAACCGTCAGCCAATGCGTACATGGCCAGGATCGAGATCAGCCAAGGGATCGAGTTgaa                                                                 <  1:757915/150‑1 (MQ=255)                                                                                                      cATGAACATGCCCGTGGCAGCGACCAGCAGGGCGCCGGCCACCCAGGCCTACTGGAACTTCCAGCGAGCGGAACCGGCGGCGAAGGCGTACATGGCCAGGATCGAGATCAGCCAAGGGATCGAGTTGAAGAAACCGACCTGCATGTCACt                                            <  2:225079/150‑1 (MQ=255)                                                                                                         gAACATGCCCGTGGCAGCGACCAGCAGGGCGCCGGCCACCCAGGCCTGCTGGAACTTCCAGCGAGCGGAACCGGCGGCGAAGGCGTACATGGCCAGGATCGAGATCAGCCAAGGGATCGAGTTGAAGAAACCGACCTGCATGTCACTGAg                                         >  2:1012495/1‑150 (MQ=255)                                                                                                          aaCATGCCCGTGGCAGCGACCAGCAGGGCGCCGGCCACCCAGGCCTGCTGGAACTTCCAGCGAGCGGAACCGGCGGCGAAGGCGTACATGGCCAGGATCGAGATCAGCCAAGGGATCGAGTTGAAGAAAc                                                            >  1:863854/1‑130 (MQ=255)                                                                                                          aaCATGCCCGTGGCAGCGACCAGCAGGGCGCCGGCCACCCAGGCCTGCTGGAACTTCCAGCGAGCGGAACCGGCGGCGAAGGCGTACATGGCCAGGATCGAGATCAGCCAAGGGATCGAGTTGAAGAAAc                                                            <  2:863854/130‑1 (MQ=255)                                                                                                           aCATGCCCGTGGCAGCGACCAGCAGGGCGCCGGCCACCCAGGCCTGCTGGAACTTCCAGCGAGCGGAACCGGCGGCGAAGGCGTACATGGCCAGGATCGAGATCAGCCAAGGGATCGAGTTGAAGAAACCGACCTGCATGTCACTGAGGt                                       >  2:138978/1‑150 (MQ=255)                                                                                                             aTGCCCGTGGCAGCGACCAGCAGGGCGCCGGCCACCCAGGCCTGCTGGAACTTCCAGCGAGCGGAACCGGCGGCGAAGGCGTACATGGCCAGGATCGAGATCAGCCAAGGGATCGAGTTGAAGAAACCGACCTGCATGTCACTGAGGTCg                                     >  1:104754/1‑150 (MQ=255)                                                                                                                 ccGTGGCAGCGACCAGCAGGGCGCCGGCCACCCAGGCCTGCTGGAACTTCCAGCGAGCGGAACCGGCGGCGAAGGCGTACATGGCCAGGATCGAGATCa                                                                                    <  2:1079930/99‑1 (MQ=255)                                                                                                                 ccGTGGCAGCGACCAGCAGGGCGCCGGCCACCCAGGCCTGCTGGAACTTCCAGCGAGCGGAACCGGCGGCGAAGGCGTACATGGCCAGGATCGAGATCa                                                                                    >  1:1079930/1‑99 (MQ=255)                                                                                                                 ccGTGGCAGCGACCAGCAGGGCGCCGGCCACCCAGGCCTGCTGGAACTTCCAGCGAGCGGAACCGGCGGCGAAGGCGTACATGGCCAGGATCGAGATCAGCCAAGGGATCGAGTTGAAGAAACCGACCTGCAt                                                  <  2:699817/133‑1 (MQ=255)                                                                                                                 ccGTGGCAGCGACCAGCAGGGCGCCGGCCACCCAGGCCTGCTGGAACTTCCAGCGAGCGGAACCGGCGGCGAAGGCGTACATGGCCAGGATCGAGATCAGCCAAGGGATCGAGTTGAAGAAACCGACCTGCAt                                                  >  1:699817/1‑133 (MQ=255)                                                                                                                   gTGGCAGCGACCAGCAGGGCGCCGGCCACCCAGGCCTGCTGGAACTTCCAGCGAGCGGAACCGGCGGCGAAGGCGTACATGGCCAGGATCGAGATCAGCCAAGGGATCGAGTTGAAGAAACCGACCTGCATGTCACTGAGGTCGCCCATa                               <  2:1116895/150‑1 (MQ=255)                                                                                                                       cAGCGACCAGCAGGGCGCCGGCCACCCAGGcctgctggtcgctgccacgggcatgttcatgtccaccacgggtgggccggtgtttgccttcgtcgccgtgtgcttcgccgcgatcggcttcaagtcagcgtcgtcactgttctggccaat                           <  2:107507‑M2/150‑121 (MQ=255)                                                                                                                        aGCGACCAGCAGGGCGCCGGACACCCAGGCCTGCTGGAACTTCCCGCGAGCGGAACCGGCGGCGAAGGCGTACATGGCCAGGATCGAGAGCAGCCAAGGGATCGAGTTGAAGAACCCGACCTGCATGTCACTGAGGTCGCCCATACGCtt                          <  2:1005484/150‑1 (MQ=255)                                                                                                                             ccAGCAGGGCGCCGGCCACCCAGGcctgctggtcgctgccacgggcatgttcatgtccaccacgggtgggccggtgtttgccttcgtcgccgtgtgcttcgccgcgatc                                                              >  2:547636‑M2/1‑24 (MQ=255)                                                                                                                             ccAGCAGGGCGCCGGCCACCCAGGcctgctggtcgctgccacgggcatgttcatgtccaccacgggtgggccggtgtttgccttcgtcgccgtgtgcttcgccgcgatc                                                              <  1:547636‑M2/109‑86 (MQ=255)                                                                                                                                 cagGGCGCCGGCCACCCAGGCCTGCTGGAACTTCCAGCGAGCGGAACCGGCGGCGAAGGCGTACATGGCCAGGATCGAGATCAGCCAAGGGATCGAGTTGAAGAAACCGACCTGCATGTCACTGAGGTCGCCCATACGCTTGATGATGCt                 <  2:968704/150‑1 (MQ=255)                                                                                                                                     gcgcCGGCCACCCAGGCCTGCTGGAACTTCCAGCGAGCGGAACCGGCGGCGAAGGCGTACATGGCCAGGATCGAGATCAGCCAAGGGATCGAGTTGAAGAAACCGACCTGCATGTCACTGAGGTCGCCCATACGCTTGATGATGCTGGGc             <  1:1012495/150‑1 (MQ=255)                                                                                                                                        ccGGCCACCCAGGCCTGCTGGAACTTCCAGCGAGCGGAACCGGCGGCGAAGGCGTACATGGCCAGGATCGAGATCAGCCAAGGGATCGAGTTGAAGAAACCGACCTGCATGTCACTGAGGTCGCCCATACGCTTGATGATGCTGGGCAGc          >  1:114621/1‑150 (MQ=255)                                                                                                                                          ggCCACCCAGGTCTGCTGGAACGTCCAGCGAGCGGAACCGGCGGCGAAGGCGTACATGGCCAGGATCGAGATCAGCCAAGGGATCGAGTTGAAGAAACCGACCTGCATGTCACGGAGGTCGCCCATACGCTTGATGATGCTGGGCAGCCa        <  2:785224/150‑1 (MQ=255)                                                                                                                                              ccccAGGCCTGCTGGAACTTCCAGCGAGCGGAACCGGCGGCGAAGGCGTACATGGCCAGGATCGAGATCAGCCAAGGGATCGAGTTGAAGAAACCGACCTGCATGTCACTGAGGTCGCCCATACGCTTGATGATGCTGGGCAGCCAGAAg    <  2:1047577/149‑1 (MQ=255)                                                                                                                                               cccAGGCCTGCTGGAACTTCCAGCGAGCGGAACCGGCGGCGAAGGCGTACATGGCCAGGATCGAGATCAGCCAAGGGATCGAGTTGAAGAAACCGACCTGCATGTCACTGAGGTCGCCCATACGCTTGATGATGCTGGGCAGCCAGAAgg   >  1:776769/1‑150 (MQ=255)                                                                                                                                                ccAGGCCTGCTGGAACTTCCAGCGAGCGGAACCGGCGGCGAAGGCGTACATGGCCAGGATCGAGATCAGCCAAGGGATCGAGTTGAAGAAACCGACCTGCATGTCACTGAGGTCGCCCATACGCTTGATGATGCTGGGCAGCCAGAAGGt  <  2:114621/150‑1 (MQ=255)                                                                                                                                                    |                                                                                                                                                  TAGCCCTGGGGGATTGGCCAGAACAGTGACGACGCTGACTTGAAGCCGATCGCGGCGAAGCACACGGCGACGAAGGCAAACACCGGCCCACCCGTGGTGGACATGAACATGCCCGTGGCAGCGACCAGCAGGGCGCCGGCCACCCAGGCCTGCTGGAACTTCCAGCGAGCGGAACCGGCGGCGAAGGCGTACATGGCCAGGATCGAGATCAGCCAAGGGATCGAGTTGAAGAAACCGACCTGCATGTCACTGAGGTCGCCCATACGCTTGATGATGCTGGGCAGCCAGAAGGT  >  NC_002947/5417998‑5418290

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.