New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 5422838 | 46 (1.060) | 4 (0.100) | 4/240 | NT | 8.6% | intergenic (‑71/+79) | tesB/PP_4763 | acyl‑CoA thioesterase II/acetyltransferase |
? | NC_002947 | = 5422854 | 42 (1.030) | intergenic (‑87/+63) | tesB/PP_4763 | acyl‑CoA thioesterase II/acetyltransferase |
AGGTTCTCCTCGATGGATTCGAGGCTCAACAGGTCGACCAGGTCGTCCAACACATGACTCATCGGCGGTTCTCCGTAGGAGCGAGCCTAGCTCGCGATGCGCCGCCCGAGCGGCGCTCGATTTCACAGGCGCTGAACGTGTTACGGGCAAGCGCCTTCCAAGTAGGCAAATGATACAGCGTTTGTCATTCGCACCGGGCATGGCTGTGCATTCAGGCGCGCAGGGTGCGCTCCCAGTGCGCGCGGTCAATGCGGTACAGCACATGCGGGCGCAGCGGGTGGCCGATGGGCAGGCGGGG > NC_002947/5422706‑5423003 | aGGTTCTCCTCGATGGATTCGAGGCTCAACAGGTCGACCAGGTCGTCCAACACATGACTCATCGGCGGTTCTCCGTAGGAGCGAGCCTAGCTCGCGATGCGCCGCCCGAGCGGCGCTCGATTTCACAGGCGCTGAACGTGTTACGGGCAa > 1:1130550‑M2/1‑149 (MQ=255) tcctcGATGGATTCGAGGCTCAACAGGTCGACCAGGTCGTCCAACACATGACTCATCGGCGGTTCTCCGTAGGAGCGAGCCTAGCTCGCGATGCGCCGCCCGAGCGGCGCTCGATTTCACAGGCGCTGAACGTGTTACGGGCAagcgcct < 2:840298‑M2/150‑8 (MQ=255) gATTCGAGGCTCAACAGGTCGACCAGGTCGTCCAACACATGACTCATCGGCGGTTCTCCGTAGGAGCGAGCCTAGCTCGCGATGCGCCGCCCGAGCGGCGCTCGATTTCACAGGCGCTGAACGTGTTACGGGCAAGCGCCTTCCAAGTAg < 1:670590/150‑1 (MQ=255) tCGAGGCTCAACAGGTCGACCAGGTCGTCCAACACATGACTCATCGGCGGTTCTCCGTAGGAGCGAGCCTAGCTCGCGATGCGCCGCCCGAGCGGCGCTCGATTTCACAGGCGCTGAACGTGTTACGGGCAAGCGCCTTCCAAGTAGGCa > 1:776172/1‑150 (MQ=255) gAGGCTCAACAGGTCGACCAGGTCGTCCAACACATGACTCATCGGCGGTTCTCCGTAGGAGCGAGCCTAGCTCGCGATGCGCCGCCCGAGCGGCGCTCGATTTCACAGGCGCTGAACGTGTTACGGGCAAGCGCCTTCCAAGTAGGCaaa > 2:983035/1‑150 (MQ=255) gCTCAACAGGTCGACCAGGTCGTCCAACACATGACTCATCGGCGGTTCTCCGTAGGAGCGAGCCTAGCTCGCGATGCGCCGCCCGAGCGGCGCTCGATTTCACAGGCGCTGAACGTGTTACGGGCAAGCGCCTTCCAAGTAGGCAAATGa > 1:145132/1‑150 (MQ=255) tCAACAGGTCGACCAGGTCGTCCAACACATGACTCATCGGCGGTTCTCCGTAGGAGCGAGCCTAGCTCGCGATGCGCCGCCCGAGCGGCGCTCGATTTCACAGGCGCTGAACGTGTTACGGGCAAGCGCCTTCCAAGTAg < 2:690567/140‑1 (MQ=255) tCAACAGGTCGACCAGGTCGTCCAACACATGACTCATCGGCGGTTATCCGTAGGAGAGAGCCTAGCTCGCGATGCGCCGCCCGAGCGGCGCTCGATTTCACAGGCGCTGAACGTGTTACGGGCAAGCGCCTTCCAAGTAg > 1:690567/1‑140 (MQ=255) aaCAGGTCGACCAGGTCGTCCAACACATGACTCATCGGCGGTTCTCCGTAGGGGCGAGCCTAGCTCGCGATGCGCCGCCCGAGCGGCGCTCGATTTCACAGGCGCTGAACGTGTTACGGGCAAGCGCCTTCCAAGTAGGCAAATGATACa > 1:253096/1‑150 (MQ=255) aaCAGGTCGACCAGGTCGTCCAACACATGACTCATCGGCGGTTCTCCGTAGGAGCGAGCCTAGCTCGCGATGCGCCGCCCGAGCGGCGCTCGATTTCACAGGCGCTGAACGTGTTACGGGCAAGCGCCTTCCAAGTAGGCAAATGATACa > 2:590750/1‑150 (MQ=255) gTCGACCAGGTCGTCCAACACATGACTCATCGGCGGTTCTCCGTAGGAGCGAGCCTAGCTCGCGATGCGCCGCCCGAGCGGCGCTCGATTTCACAGGCGCTGAACGTGTTACGGGCAAGCGCCTTCCAAGTAGGCAAATGATACAGCGtt > 1:288202/1‑150 (MQ=255) tCGACCAGGTCGTCCAACACATGACTCATCGGCGGTTCTCCGTAGGAGCGAGCCTAGCTCGCGATGCGCCGCCCGAGCGGCGCTCGATTTCACAGGCGCTGAACGTGTTACGGGCAAGCGCCTTCCAAGTAGGCAAATGATACAGCGttt < 2:1120159/150‑1 (MQ=255) ccAGGTCGTCCAACACATGACTCATCGGCGGTTCTCCGTAGGAGCGAGCCTAGCTCGCGATGCGCCGCCCGAGCGGCGCTCGATTTCACAGGCGCTGAACGTGTTACGGGCAAGCGCCTTCCaa > 1:451716/1‑124 (MQ=255) ccAGGTCGTCCAACACATGACTCATCGGCGGTTCTCCGTAGGAGCGAGCCTAGCTCGCGATGCGCCGCCCGAGCGGCGCTCGATTTCACAGGCGCTGAACGTGTTACGGGCAAGCGCCTTCCaa < 2:451716/124‑1 (MQ=255) ccAGGTCGTCCAACACATGACTCATCGGCGGTTCTCCGTAGGAGCGAGCCTAGCTCGCGATGCGCCGCCCGAGCGGCGCTCGATTTCACAGGCGCTGAACGTGTTACGGGCAAGCGCCTTCCAAGTAGGCAAATGATACAGCGTTTGTCa > 2:982702/1‑150 (MQ=255) cAACACATGACTCATCGGCGGTTCTCCGTAGGAGCGAGCCTAGCTCGCGATGCGCCGCCCGAGCGGCGCTCGATTTCACAGGCGCTGAACGTGTTACGGGCAAGCGCCtt < 1:270319/110‑1 (MQ=255) cAACACATGACTCATCGGCGGTTCTCCGTAGGAGCGAGCCTAGCTCGCGATGCGCCGCCCGAGCGGCGCTCGATTTCACAGGCGCTGAACGTGTTACGGGCAAGCGCCtt > 2:270319/1‑110 (MQ=255) aaCACATGACTCATCGGCGGTTCTCCGTAGGAGCGAGCCTAGCTCGCGATGCGCCGCCCGAGCGGCGCTCGATTTCACAGGCGCTGAACGTGTTACGGGCAAGCGCCTTCCAAGTAGGCAAATGATACAGCGTTTGTCATTCGCACCgg < 1:235021/149‑1 (MQ=255) aaCACATGACTCATCGGCGGTTCTCCGTAGGAGCGAGCCTAGCTCGCGATGCGCCGCCCGAGCGGCGCTCGATTTCACAGGCGCTGAACGTGTTACGGGCAAGCGCCTTCCAAGTAGGCAAATGATACAGCGTTTGTCATTCGCACCgg > 2:235021/1‑149 (MQ=255) aaCACATGACTCATCGGCGGTTCTCCGTAGGAGCGAGCCTAGCTCGCGATGCGCCGCCCGAGCGGCGCTCGATTTCACAGGCGCTGAACGTGTTACGGGCAAGCGCCTTCCAAGTAGGCAAATGATACAGCGTTTGTCATTCGCACCgg > 2:234928/1‑149 (MQ=255) aaCACATGACTCATCGGCGGTTCTCCGTAGGAGCGAGCCTAGCTCGCGATGCGCCGCCCGAGCGGCGCTCGATTTCACAGGCGCTGAACGTGTTACGGGCAAGCGCCTTCCAAGTAGGCAAATGATACAGCGTTTGTCATTCGCACCgg < 1:234928/149‑1 (MQ=255) caTGACTCATCGGCGGTTCTCCGTAGGAGCGAGCCTAGCTCGCGATGCGCCGCCCGAGCGGCGCTCGATTTCACAGGCGCTGAACGTGTTACGGGCAAGCGCCTTCCAAGTAGGCAAATGATACAGCGTTTGTCATTCGCACCGGGCATg > 1:611728/1‑150 (MQ=255) cTCATCGGCGGTTCTCCGTAGGAGCGAGCCTAGCTCGCGATGCGCCGCCCGAGCGGCGCTCGATTTCACAGGCGCTGAACGTGTTACGGGCAAGCGCCTTCCAAGTAGGCAAATGATACAGCGTTTGTCATTCGCACCGGGCATGGCtgt < 1:982702/150‑1 (MQ=255) aTCGGCGGTTCTCCGTAGGAGCGAGCCTAGCTCGCGATGCGCCGCCCGAGCGGCGCTCGATTTCACAGGCGCTGAACGTGTTACGGGCAAGCACCCACCAAATAAACACATGTTAGAGCGTAGGTCATTCGCACCGGGCATGGCTGTGCa > 2:121709/1‑150 (MQ=37) gTAGGAGCGAGCCTAGCTCGCGATGCGCCGCCCGAGCGGCGCTCGATTTCACAGGCGCTGAACGTGTTACGGGCAAGCGCCTTCCAAGTAGGCAAATGATACAGCGTTTGTCATTCGCACCGGGCATGGCTGTGCATTCAGGCGCGCAgg < 1:983035/150‑1 (MQ=255) gTAGGAGCGAGCCTAGCTCGCGATGCGCCGCCCGAGCGGCGCTCGATTTCACAGGCGCTGAACGTGTTACGGGCAAGCGCCTTCCAAGTAGGCAAATGATACAGCGTTTGTCATTCGCACCGGGCATGGCTGTGCATTCAGGCGCGCAgg < 2:611728/150‑1 (MQ=255) tAGGAGCGAGCCTAGCTCGCGATGCGCCGCCCGAGCGGCGCTCGATTTCACAGGCGCTGAACGTGTTACGGGCAAGCGCCTTCCAAGTAGGCAAATGATACAGCGTTTGTCATTCGCACCGGGCATGGCtgt > 1:408894/1‑132 (MQ=255) tAGGAGCGAGCCTAGCTCGCGATGCGCCGCCCGAGCGGCGCTCGATTTCACAGGCGCTGAACGTGTTACGGGCAAGCGCCTTCCAAGTAGGCAAATGATACAGCGTTTGTCATTCGCACCGGGCATGGCtgt < 2:408894/132‑1 (MQ=255) ggAGCGAGCCTAGCTCGCGATGCGCCGCCCGAGCGGCGCTCGATTTCACAGGCGCTGAACGTGTTACGGGCAAGCGCCTTCCAAGTAGGCAAATGATACAGCGTTTGTCATTCGCACCGGGCATGGCTGTGCATTCAGGCGCGCAGGGTg < 1:1039130/150‑1 (MQ=255) agcCTAGCTCGCGATGCGCCGCCCGAGCGGCGCTCGATTTCACAGGCGCTGAACGTGTTACGGGCAAGCGCCTTCCAAGTAGGCAAATGATACAGCGTTTGTCATTCGCACCGGGCATGGCTGTGCATTCAGGCGCGCAGGGTGCGCTcc < 2:776172/150‑1 (MQ=255) agcCTAGCTCGCGATGCGCCGCCCGAGCGGCGCTCGATTTCACAGGCGCTGAACGTGTTACGGGCAAGCGCCTTCCAAGTAGGCAAATGATACAGCGTTTGTCATTCGCACCGGGCATGGCTGTGCATTCAGGCGCGCAGGGTGCGCTcc > 2:744982/1‑150 (MQ=255) agcCTAGCTCGCGATGCGCCGCCCGAGCGGCGCTCGATTTCACAGGCGCTGAACGTGTTACGGGCAAGCGCCTTCCAAGTAGGCAAATGATACAGCGTTTGTCATTCGCACCGGGCATGGCTGTGCATTCAGGCGCGCAGGGTGCGCTcc > 2:1054665/1‑150 (MQ=255) tAGCTCGCGATGCGCCGCCCGAGCGGCGCTCGATTTCACAGGCGCTGAACGTGTTACGGGCAAGCGCCTTCCAAGTAGGCAAATGATACAGCGTTTGTCATTCGCACCGGGCATGGCTGTGCATTCAGGCGCGCAGGGTGCGCTCCCAGt < 1:3367/150‑1 (MQ=255) ccgccCGAGCGGCGCTCGATTTCACAGGCGCTGAACGTGTTACGGGCAAGCGCCTTCCAAGTAGGCAAATGATACAGCGTTTGTCATTCGCACCGGGCATGGCTGTGCATTCAGGCGCGCAGGGTGCGCTCCCAGTGCGCGCGGTCAATg < 1:651746/150‑1 (MQ=255) ccgccCGAGCGGCGCTCGATTTCACAGGCGCTGAACGTGTTACGGGCAAGCGCCTTCCAAGTAGGCAAATGATACAGCGTTTGTCATTCGCACCGGGCATGGCTGTGCATTCAGGCGCGCAGGGTGCGCTCCCAGTGCGCGCGGTCAATg > 1:286190/1‑150 (MQ=255) cccGAGCGGCGCTCGATTTCACAGCCGCGTTTTGTGTTACGGGCAAGCGCCTTCCAAGTAGGCAAATGATACAGCGTTTGTCATTCGCACCGGGCATGGCTGTGCATTCAGGCGCGCAGGGTGCGCTCCCAGTGCGCGCGGTCAATGCgg < 1:840298/150‑1 (MQ=255) gcggcgCTCGATTTCACAGGCGCTGAACGTGTTACGGGCAAGCGCCTTCCAAGTAGGCAAATGATACAGCGTTTGTCATTCGCACCGGGCATGGCTGTGCATTCAGGCGCGCAGGGTGCGCTCCCAGTGCGCGCGGTCAATGCGGTACAg < 2:327868/150‑1 (MQ=255) cgcTCGATTTCACAGGCGCTGAACGTGTTACGGGCAAGCGCCTTCCAAGTAGGCAAATGATACAGCGTTTGTCATTCGCACCGGGCATGGCTGTGCATTCAGGCGCGCAGGGTGCGCTCCCAGTGCGCGCGGTCAATGCGGTACAGcaca < 2:253096/150‑1 (MQ=255) cTCGATTTCACAGGCGCTGAACGTGTTACGGGCAAGCGCCTTCCAAGTAGGCAAATGATACAGCGTTTGTCATTCGCACCGGGCATGGCTGTGCAt > 1:677746/1‑96 (MQ=255) cTCGATTTCACAGGCGCTGAACGTGTTACGGGCAAGCGCCTTCCAAGTAGGCAAATGATACAGCGTTTGTCATTCGCACCGGGCATGGCTGTGCAt < 2:677746/96‑1 (MQ=255) gATTTCACAGGCGCTGAACGTGTTACGGGCAagcgcctgtgaaatcgagcgccgctcgggcggcgcatcgcgagctaggctcgctcctacggagaaccgccgatgagtcatgtgttggacgacctggtcgacctgttgagcctc < 1:488328‑M2/144‑114 (MQ=255) gATTTCACAGGCGCTGAACGTGTTACGGGCAagcgcctgtgaaatcgagcgccgctcgggcggcgcatcgcgagctaggctcgctcctacggagaaccgccgatgagtcatgtgttggacgacctggtcgacctgttgagcctc > 2:488328‑M2/1‑31 (MQ=255) tttCACAGGCGCTGAACGTGTTACGGGCAagcgcctgtgaaatcgagcgccgctcgggcggcgcatcgcgagctaggctcgctcctacggagaaccgccgatgagtcatgtgttggacgacctggtcgacctgttgagcctcgaa > 2:6100‑M2/1‑29 (MQ=255) tttCACAGGCGCTGAACGTGTTACGGGCAagcgcctgtgaaatcgagcgccgctcgggcggcgcatcgcgagctaggctcgctcctacggagaaccgccgatgagtcatgtgttggacgacctggtcgacctgttgagcctcgaa < 1:6100‑M2/145‑117 (MQ=255) acaGGCGCTGAACGTGTTACGGGCAAGCGCCTTCCAAGTAGGCAAATGATACAGCGTTTGTCATTCGCACCGGGCATGGCTGTGCATTCAGGCGCGCAGGGTGCGCTCCCAGTGCGCGCGGTCAATGCGGTACAGCACATGCGGGCGCAg > 1:868414/1‑150 (MQ=255) acaGGCGCTGAACGTGTTACGGGCAAGCGCCTTCCAAGTAGGCAAATGATACAGCGTTTGTCATTCGCACCGGGCATGGCTGTGCATTCAGGCGCGCAGGGTGCGCTCCCAGTGCGCGCGGTCAATGCGGTACAGCACATGCGGGCGCAg < 1:724417/150‑1 (MQ=255) ggCGCTGAACGTGTTACGGGCAAGCGCCTTCCAAGTAGGCAAATGATACAGCGTTTGTCATTCGCACCGGGCATGGCTGTGCATTCAGGCGCGCAGGGTGCGCTCCCAGTGCGCGCGGTCAATGCGGTACAGCACATGCGGGCGCAGCgg < 1:590750/150‑1 (MQ=255) ggCGCTGAACGGGTTACGGGCAAGCGCCTTCCAAGTAGGCAAATGATACAGCGTTTGTCATTCGCACCGGGCATGGCTGTGCATTCAGGCGCGCAGGGTGCGCTCCCAGGGCGCGCGGTCAATGCGGTACAGCACATGCGGGCGCAGCgg < 2:462471/150‑1 (MQ=255) gAACGTGTTACGGGCAAGCGCCTTCCAAGTAGGCAAATGATACAGCGTTTATCATTCGCACCGGGCATGGCTGTGCTTTCTGGCGCGCAAGGTGCAGTGTCAGTGCGCGCGGTCAATGCGGTACAGCACATGCGGGCGCAGCGGGTGGcc > 2:821063/1‑150 (MQ=255) gtgtTACGGGCAAGCGGCGTCCAAGTAGGCAAATGATACAGCGTTTGTCATTCGCACCGGGCATGGCTGTGCATTCAGGCGCGCAGGGTGGGTGCCCAGTGCGCGCGGTCAATGCGGTACAGCACATGCGGGCGCAGCGGGTGGCCGATg < 2:427509/150‑1 (MQ=255) tgtTACGGGCAAGCGCCTTCCAAGTAGGCAAATGATACAGCGTTTGTCATTCGCACCGGGCATGGCTGTGCATTCAGGCGCGCAGGGTGCGCTCCCAGTGCGCGCGGTCAATGCGGTACAGCACATGCGGGCGCAGCGGGTGGCCGATgg < 1:540094/150‑1 (MQ=255) tgtTACGGGCAAGCGCCTTCCAAGTAGGCAAATGATACAGCGTTTGTCATTCGCACCGGGCATGGCTGTGCATTCAGGCGCGCAGGGTGCGCTCCCAGTGCGCGCGGTCAATGCGGTACAGCACATGCGGGCGCAGCGGGTGGCCGATgg < 2:288202/150‑1 (MQ=255) gggCAAGCGCCTTCCAAGTAGGCAAATGATACAGCGTTTGTCATTCGCACCGGGCATGGCTGTGCATTCAGGCGCGCAGGGTGCGCTCCCAGTGCGCGCGGTCAATGCGGTACAGCACATGCGGGCGCAGCGGGTGGCCGATGGGCAGGc < 1:479511/150‑1 (MQ=255) aaGCGCCTTCCAAGTAGGCAAATGATACAGCGTTTGTCATTCGCACCGGGCATGGCTGTGCATTCAGGCGCGCAGGGTGCGCTCCCAGTGCGCGCGGTCAATGCGGTACAGCACATGCGGGCGCAGCGGGTGGCCGATGGGCAGGCgggg < 2:145132/150‑1 (MQ=255) | AGGTTCTCCTCGATGGATTCGAGGCTCAACAGGTCGACCAGGTCGTCCAACACATGACTCATCGGCGGTTCTCCGTAGGAGCGAGCCTAGCTCGCGATGCGCCGCCCGAGCGGCGCTCGATTTCACAGGCGCTGAACGTGTTACGGGCAAGCGCCTTCCAAGTAGGCAAATGATACAGCGTTTGTCATTCGCACCGGGCATGGCTGTGCATTCAGGCGCGCAGGGTGCGCTCCCAGTGCGCGCGGTCAATGCGGTACAGCACATGCGGGCGCAGCGGGTGGCCGATGGGCAGGCGGGG > NC_002947/5422706‑5423003 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |