Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_002947 1,491,144 G→C 7.0% S267T (AGT→ACT)  cysNC → sulfate adenylyltransferase subunit 1/adenylyl‑sulfate kinase

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0029471,491,1440GC 7.0% 174.5 / 4.8 58S267T (AGT→ACT) cysNCsulfate adenylyltransferase subunit 1/adenylyl‑sulfate kinase
Reads supporting (aligned to +/- strand):  ref base G (21/32);  new base C (2/2);  total (24/34)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 6.83e-01

TGGTACGCCGGCCCGACGCTGATGGAAATCCTCGAAACCGTCGAGGTTTCGGCTGACCGCAACTTCACCGACCTGCGTTTC‑‑CCGGTGCAGTACGTCAACCGTCCCAACCTGAACTTCCGCGGCTTCGCGGGCACCATCGCCAGTGGCGTGGTGCACAAAGGTGACGAGATTGTCGTGCTGCCGTCGGGCAAGAGCAGCCGGGTCAAGTCCATCGTCACCTACGAAGGTGAACTGGAAAACGCTGGCCCAGGCCAGGCCGTGACCCTGACCATGGAAGACGAGATC  >  NC_002947/1491002‑1491286
                                                                                                                                                 |                                                                                                                                                
tGGTACGCCGGCCCGACGATGATGGAAATCCTCGAAACCGTCGAGGTTTCGGCTGACCGCAACTTCACCGACCTGCGTTTC‑‑CCGGTGCAGTACGTCAACCGTCCCAACCTGAACTTCCGCGGCTTCGCGGGCACCATCGCCAGTGGCgtg                                                                                                                                          >  2:457377/1‑150 (MQ=255)
  gTACGCCGGCACGAAACTGATATAATTCCTTGGAACCGTCTAGGTTTCGGCTGACCGCCACTCATTTATCCCGCTTTTC‑‑CCGGTGCAGTACGTCAACCGTCCCAACCTGAACTTCCGCGGCTTCGCGGGCACCACGCCACTGGCgatggt                                                                                                                                        <  1:299797/150‑6 (MQ=255)
      gCCGGCCCGACGCTGATGGAAATCCTCGAAACCGTCGAGGTTTCGGCTGACCGCAACTTCACCGACCTGCGTTTC‑‑CCGGTGCAGTACGTCCAAAGTTATATCGGGTACTTCCGCGGCTGCGCGGGCACCATCGCCAGTGGCGTGGTGcac                                                                                                                                    >  2:29585/1‑150 (MQ=255)
          gCCCGACGCTGATGGAAATCCTCGAAACCGTCGAGGTTTCGGCTGACCGCAACTTCACCGACCTGCGTTTC‑‑CCGGTGCAGTACGTCAACCGTCCCAACCTGAACTTCCGCGGCTTCGCGGGCACCATCACCAGTGGCGTGGTGCACAAAg                                                                                                                                <  2:1077297/150‑1 (MQ=255)
            ccGACGCTGATGGAAATCCTCGAAACCGTCGAGGTTTCCGCTGACCGCAACTTCACCGACCTGCGTTTC‑‑CCGGTGCAGTACGTCAACCGTCCCAACCTGAACTTCCGCGGCTTCGCGGGCACCATCGCCAGTGGCGTGGTGCACAAAGGt                                                                                                                              <  2:299388/150‑1 (MQ=255)
              gACGCTGATGGAAATCCTCGAAACCGTCGAGGTTTCGGCTGACCGCAACTTCACCGACCTGCGTTTC‑‑CCGGTGCAGTACGTCAACCGTCCCAACCTGAACTTCCGCGGCTTCGCGGGCACCATCGCCAGTGGCGTGGTGCACAAAGGTGa                                                                                                                            <  2:185562/150‑1 (MQ=255)
                   tGATGGAAATCCTCGAAACCGTCGAGGTTTCGGCTGACCGCAACTTCACCGACCTGCGTTTC‑‑CCGGTGCAGTACGTCAACCGTCCCAACCTGAACTTCCGCGGCTTCGCGGGCACCATCGCCAGTGGCGTGGTGCACAAAGGTGACgaga                                                                                                                       <  1:457377/150‑1 (MQ=255)
                     aTGGAAATCCTCGAAACCGTCGAGGTTTCGGCTGACCGCAACTTCACCGACCTGCGTTTC‑‑CCGGTGCAGTACGTCAACCGTCCCAACCTGAACTTCCGCGGCTTCGCGGGCACCATCGCCAGTGGc                                                                                                                                              <  1:86615/126‑1 (MQ=255)
                     aTGGAAATCCTCGAAACCGTCGAGGTTTCGGCTGACCGCAACTTCACCGACCTGCGTTTC‑‑CCGGTGCAGTACGTCAACCGTCCCAACCTGAACTTCCGCGGCTTCGCGGGCACCATCGCCAGTGGc                                                                                                                                              >  2:86615/1‑126 (MQ=255)
                      tGGAAATCCTCGAAACCGTCGAGGTTTCGGCTGACCGCAACTTCACCGACCTGCGTTTC‑‑CCGGTGCAGTACGTCAACCGTCCCAACCTGAACTTCCGCGGCTTCGCGGGCACCATCGCCAGTGGCGTGGTGCACAAAGGTGGCGAGATTg                                                                                                                    >  1:86363/1‑150 (MQ=255)
                            tCCTCGAAACCGTCGAGGTTTCGGCTGACCGCAACTTCACCGACCTGCGTTTC‑‑CCGGTGCAGTACGTCAACCGTCCCAACCTGAACTTCCGCGGCTTCGCGGGCACCATCGCCAGTGGCGTGGTGCACAAAGGTGACGAGATTGTCGtgc                                                                                                              >  2:726800/1‑150 (MQ=255)
                               tCGAAACCGTCGAGGTTTCGGCTGACCGCAACTTCACCGACCTGCGTTTC‑‑CCGGTGCAGTACGTCAACCGTCCCAACCTGAACTTCCGCGGCTTCGCGGGCACCATCGCCAGTGGCGTGGTGca                                                                                                                                     >  2:312299/1‑124 (MQ=255)
                               tCGAAACCGTCGAGGTTTCGGCTGACCGCAACTTCACCGACCTGCGTTTC‑‑CCGGTGCAGTACGTCAACCGTCCCAACCTGAACTTCCGCGGCTTCGCGGGCACCATCGCCAGTGGCGTGGTGca                                                                                                                                     <  1:312299/124‑1 (MQ=255)
                                    acagTCGAGGTTTCGGCTGACCGCAACTTCACCGACCTGCGTTAC‑‑CCGGTGCAGTACGTCAACCGTCCCAACCTGAACTTCCGCGGCTTCGCGGGCACCATCGCCAGTGGCGTGGTGCACAAAGGTGACGAGATTGTCGTGCTGCCGTCg                                                                                                      <  2:371774/147‑1 (MQ=255)
                                    aCCGTCGAGGTTTCGGCTGACCGCAACTTCACCGACCTGCGTTTC‑‑CCGGTGCAGTACGTCAACCGTCCCAACCTGAACTTCCGCGGCTTCGCGGGCACCACGCCACTGGCGAtggtg                                                                                                                                       <  2:767390/117‑1 (MQ=255)
                                    aCCGTCGAGGTTTCGGCTGACCGCAACTTCACCGACCTGCGTTTC‑‑CCGGTGCAGTACGTCAACCGTCCCAACCTGAACTTCCGCGGCTTCGCGGGCACCACGCCACTGGCGAtggtg                                                                                                                                       >  1:767390/1‑117 (MQ=255)
                                     ccGTCGAGGTTTCGGCTGACCGCAACTTCACCGACCTGCGTTTC‑‑CCGGTGCAGTACGTCAACCGTCCCAACCTGACCTTCCGCGGCTTCGCGGGCACCATCGCCAGTGGCGTGGTGCACAAAGGTGACGAGATTGTCGTGCTGCCGTCgg                                                                                                     <  2:726696/150‑1 (MQ=255)
                                         cGAGGTTTCGGCTGACCGCAACTTCACCGACCTGCGTTTC‑‑CCGGTGCAGTACGTCAACCGTCCCAACCTGAACTTCCGCGGCTTCGCGGGCACCATCGCCAGTGGCGTGGTGCACAAAGGTGACGAGATTGTCGTGCTGCCGTCGGGCaa                                                                                                 <  2:139350/150‑1 (MQ=255)
                                             gTTTCGGCTGACCGCAACTTCACCGACCTGCGTTTC‑‑CCGGTGCAGTACGTCAACCGTCCCAACCTGAACTTCCGCGGCTTCGCGGGCACCATCGCCAGTGGCGTGGTGCACAAAGGTGACGAGATTGTCGTGCTGCCGTCGGGCAAGagc                                                                                             >  1:339611/1‑150 (MQ=255)
                                             gTTTCGGCTGACCGCAACTTCACCGACCTGCGTTTC‑‑CCGGTGCAGTACGTCAACCGTCCCAACCTGAACTTCCGCGGCTTCGCGGGCACCATCGCCAGTGGCGTGGTGCACAAAGGTGACGAGATTGTCGTGCTGCCGTCGGGCAAGagc                                                                                             <  1:835147/150‑1 (MQ=255)
                                              tttCGGCTGACCGCAACTTCACCGACCTGCGTTTCCTCCCGTTCATCGTTATGCTTCTCAACCTGAACTTCCGCTGCTTCGCGGGCACCATCGCCAGTGGCGTGGTGCACAAAGGTGACGAGATTGTCGTGCTGCCGTCGGGCAAGagca                                                                                            >  1:861869/1‑150 (MQ=255)
                                                  ggCTGACCGCAACTTCACCGACCTGCGTTTC‑‑CCGGTGCAGTACGTCATCCGTCCCAACCTGAACTTCCGCGGCTTCGCGGGCACCATCGCCAGTGGCGTGGTGCACAAAGGTGACGAGATTGTCGTGCTGCCGTCGGGCAAGAGCAGCCg                                                                                        >  2:571473/1‑150 (MQ=255)
                                                  ggCTGACCGCAACTTCACCGACCTGCGTTTC‑‑CCGGTGCAGTACGTCAACCGTCCCAACCTGAACTTCCGCGGCTTCGCGGGCACCATCGCCAGTGGCGTGGTGCACAAAGGTGACGAGATTGTc                                                                                                                  >  2:17362/1‑124 (MQ=255)
                                                  ggCTGACCGCAACTTCACCGACCTGCGTTTC‑‑CCGGTGCAGTACGTCAACCGTCCCAACCTGAACTTCCGCGGCTTCGCGGGCACCATCGCCAGTGGCGTGGTGCACAAAGGTGACGAGATTGTc                                                                                                                  <  1:17362/124‑1 (MQ=255)
                                                        ccGCAACTTCACCGACCTGCGTTTC‑‑CCGGTGCAGTACGTCAACCGTCCCAACCTGAACTTCCGCGGCTTCGCGGGCACCATCGCCAGTGGCGTGGTGCACAAAGGTGACGAGATTGTCGTGCTGCCGTCGGGCAAGAGCAGCCGGGTCaa                                                                                 >  1:658505/1‑150 (MQ=255)
                                                         cGCAACTTCACCGACCTGCGTTTC‑‑CCGGTGCAGTACGTCAACCGTCCCAACCTGAACTTCCGCGGCTTCGCGGGCACGATGAACATCGGCGTGGTGCACAAAGGTGACGAGATTGTCGTGCTGACGTCGGGAAAGAGCAGCCGGGTCAAg                                                                                >  1:619288/1‑150 (MQ=255)
                                                          gCAACTTCACCGACCTGCGTTTC‑‑CCGGTGCAGTACGTCAACCGTCCCAACCTGAACTTCCGCGGCTTCGCGGGCACCATCGCCAGTGGCGTGGTGCACAAAGGTGACGAGATTGTCGTGCTGCCGTCGGGCAAGAGCAGCCGGGTCAAGt                                                                               <  2:861869/150‑1 (MQ=255)
                                                            aaCTTCACCGACCTGCGTTTC‑‑CAGGTGCAGTACGTCAACCGTCCCAACCTGAACTTCCGCGGCTTCGCGGGCACCATCGCCAGTGGCGTGGTGCACAAAGGTGACGAGATTGTCGTGCTGCCGTCGGGCAAGAGCAGCCGGGTCAAGTcc                                                                             >  2:719253/1‑150 (MQ=255)
                                                               ttCCCCGACCTGCGTTTC‑‑CCGGTGCAGTACGTCAACCCCAGCAACCTGAACTTCCGCGGCTTCGCGGGCACCATCGCCAGTGGCGTGGTGCACAAAGGTGACGAGATTGTCGTGCTGCCGTCGGGCAAGAGCAGCCGGGTCAAGTCCATc                                                                          <  1:11286/150‑1 (MQ=255)
                                                               ttCACCGACCTGCGTTTC‑‑CCGGTGCAGTACGTCAACCGTCCCAACCTGAACTTCCGCGGCTTCGCGGGCACCATCGCCAGTGGCGTGGTGCACAAAGGTGACGAGATTGTCGTGCTGCCGTCGGGCAAGAGCAGCCGGGTCAAGTCCATc                                                                          <  1:669403/150‑1 (MQ=255)
                                                                  aCCGACCTGCGTTTC‑‑CCGGTGCAGTACGTCAACCGTCCAAAACAAATCTCTCAGTTCTTCTCTGGCACCATCGCAAGTGGCGTGGTGCACAAAGGTGACGAGATTGTCGTGCTGCCGTCGGGCAAGAGCAGCCGGGTCAAGTCCATCGTc                                                                       <  1:806317/150‑1 (MQ=255)
                                                                   ccGACCTGCGTTTC‑‑CCGGTGCAGTACGTCAACCGTCCCAACCTGAACTTCCGCGGCTTCGCGGGCACCATCGCCAGTGGCGTGGTGCACAAAGGTGACGAGATTGTCGTGCTGCCGTCGGGCAAGAGCAGCCGGGTCAAGTCCATCGTCa                                                                      <  2:3664/150‑1 (MQ=255)
                                                                            cGTTTC‑‑CCGGTGCAGTACGTCAACCGTCCCAACCTGAACTTCCGCGGCTTCGCGGGCACCATCGCCAGTGGCGTGGTGCACAAAGGTGACGAGATTGTCGTGCTGCCGTCGGGCAAGAGAGCCGTGGTCAAGTCCATCGTCACCTACGaa                                                              <  1:29585/150‑1 (MQ=255)
                                                                                    ccGGTGCAGTACGTCAACCGTCCCAACCTGAACTTCCGCGGCTTCGCGGGCACCATCGCCAGTGGCGTGGTGCACAAAGGTGACGAGAtt                                                                                                                     >  1:19536/1‑90 (MQ=255)
                                                                                    ccGGTGCAGTACGTCAACCGTCCCAACCTGAACTTCCGCGGCTTCGCGGGCACCATCGCCAGTGGCGTGGTGCACAAAGGTGACGAGAtt                                                                                                                     <  2:19536/90‑1 (MQ=255)
                                                                                    ccGGTGCAGTACGTCAACCGTCCCAACCTGAACTTCCGCGGCTTCGCGGGCACCATCGCCAGTGGCGTGGTGCACAAAGGTGACGAGATTGTCGTGCTGCCGTCGGGCAAGAGCAGCCGGGTCAAGTCCATCGTCACCTACGAAGGTGaa                                                        >  1:643620/1‑150 (MQ=255)
                                                                                    ccGGTGCAGTACGTCAACCGTCCCAACCTGAACTTCCGCGGCTTCGCGGGCACCATCGCCAGTGGCGTGGTGCACAAAGGTGACGAGATTGTCGTGCTGCCGTCGGGCAAGAGCAGCCGGGTCAAGTCCATCGTCACCTACGAAGGTGaa                                                        <  2:643620/150‑1 (MQ=255)
                                                                                     cGGTGCAGTACGTCAACCGTCCCAACCGGAACGTCCGCGGCTTCGCGGGCACCATCGCCAGTGGCGTGGTGCACAAAGGTGACGAGATTGTCGTGCTGCCGTCGGGCAAGAGCAGCCGGGTCAAGTCCATCGTCACCTACGAAGGTGAAc                                                       <  2:342595/150‑1 (MQ=255)
                                                                                     cGGTGCAGTACGTCAAACGTGCAAACCTGATCTTCTGCGCCTCCGCGGGCACCATCGCCAGTGGCGTGGTGCACAAAGGTGACGAGATTGTCGTGCTGCCGTCGGGCAAGAGCAGCCGGGTCAAGTCCATCGTCACCTACGAAGGTGAAc                                                       <  2:10153/150‑1 (MQ=255)
                                                                                      ggTGCAGTACGTCAACCGTCCCAACCTGAACTTCCGCGGCTTCGCGGGCACCATCGCCAGTGGCGTGGTGCACAAAGGTGACGAGATTGTCGTGCTGCCGTCGGGCAAGAGCAGCCGGGTCAAGTCCATCGTCACCTACGAAGGTGGACt                                                      <  1:1002824/150‑1 (MQ=255)
                                                                                      ggTGCAGTACGTCAACCGTCCCAACCTGAACTTCCGCGGCTTCGCGGGCACCATCGCCAGTGGCGTGGTGCACAAAGGTGACGAGATTGTCGTGCTGCCGTCGGGCAAGAGCAGCCGGGTCAAGTCCATCGTCACCTACGAAGGTGAACt                                                      <  2:339611/150‑1 (MQ=255)
                                                                                                 tCAACCGTCCCAACCTGAACTTCCGCGGCTTCGCGGGCACCATCGCCAGTGGCGTGGTGCACAAAGGTGACGAGATTGTCGTGCTGCCGTCGGGCAAGAGCAGCCGGGTCAAGTCCATCGTCACCTACGAAGGTGAACTGGAAAACGCTg                                           >  2:108282/1‑150 (MQ=255)
                                                                                                     ccGTCCCAACCTGAACTTCCGCGGCTTCGCGGGCACCATCGCCAGTGGCgtggt                                                                                                                                        >  2:788897/1‑54 (MQ=255)
                                                                                                     ccGTCCCAACCTGAACTTCCGCGGCTTCGCGGGCACCATCGCCAGTGGCgtggt                                                                                                                                        <  1:788897/54‑1 (MQ=255)
                                                                                                           cAACCTGAACTTCCGCGGCTTCGCGGGCACCATCGCCAGTGGCGTGGTGCACAAAGGTGACGAGATTGTCGTGCTGCCGTCGGGCAAGAGCAGCCGGGTCAAGTCCATCGTCACCTACGAAGGTGAACTGGAAAACGCTGGCccaggcca                                 >  2:862608/1‑150 (MQ=255)
                                                                                                               cTGAACTTCCGCGGCTTCGCGGGCACCATCGCCAGTGGCGTGGTGCACAAAGGTGACGAGATTGTCGTGCTGCCGTCGGGCAAGAGCAGCCGGGTCaa                                                                                 <  2:821219/98‑1 (MQ=255)
                                                                                                               cTGAACTTCCGCGGCTTCGCGGGCACCATCGCCAGTGGCGTGGTGCACAAAGGTGACGAGATTGTCGTGCTGCCGTCGGGCAAGAGCAGCCGGGTCaa                                                                                 >  1:821219/1‑98 (MQ=255)
                                                                                                                     ggccGCGGCTTCGCGGGCACCATCGCCAGTGGCGTGGTGCACAAAGGTGACGAGATTGTCGTGCTGCCGTCGTGCAAGAGCAGCGGGGTCAAGTCCATCGTCACCTACGAAGGTGAACTGGAAAACGCTGGCCCAGGCCAGGCCGTGAcc                       <  2:152476/148‑1 (MQ=255)
                                                                                                                         gcgGCTTCGCGGGCACCATCGCCAGTGGCGTGGTGCACAAAGGTGACGAGATTGTCGTGCTGCCGTCGGGCAAGAGCAGCCGGGTCAAGTCCATCGTCACCTACGAAGGTGAACTGGAAAACGCTGGCCCAGGCCAGGCCGTGACCCTGa                   <  2:999624/150‑1 (MQ=255)
                                                                                                                             cTTCGCGGGCACCATCGCCAGTGGCGTGGTGCACAAAGGTGACGAGATTGTCGTGCTGCCGTCGGGCAAGAGCAGCCGGGTCAAGTCCATCGTCACCTACGAAGGTGAACTGGAAAACGCTGGCCCAGGCCAGGCCGTGACCCTGACCAt               >  2:723562/1‑150 (MQ=255)
                                                                                                                              ttCGCGGGCACCATCGCCAGTGGCGTGGTGCACAAAGGTGACGAGATTGTCGTGCTGCCGTCGGGCAAGAGCAGCCGGGTCAAGTCCATCGTCACCTACGAAGGTGAACTGGAAAACGCTGGCCCAGGCCAGGCCGTGACCCTGACCATg              <  1:571473/150‑1 (MQ=255)
                                                                                                                                tttgtgCACCACGCCACTGGCGATGGTGCACAAAGGTGACGAGATTGTCGTGCTGCCGTCGGGCAAGAGCAGCCGGGTCAAGTCCATAGAGGGATACGAAGGTGAACTGGAAAACGCTGGCCCAGGCCAGGCCGTGACCCTGACCATGGa            >  1:738991/6‑150 (MQ=255)
                                                                                                                                 gcgGGCACCATCGCCAGTGGCGTGGTGCACAAAGGTGACGAGATTGTCGTGCTGCCGTCGGGCAAGAGCAGCCGGGTCAAGTCCATCGTCACCTACGAAGGTGAACTGGAAAACGCTGGCCCAGGCCAGGCCGTGACCCTGACCATGGaa           <  1:726800/150‑1 (MQ=255)
                                                                                                                                 gcgGGCACCATCGCCAGTGGCGTGGTGCACAAAGGTGACGAGATTGTCGTGCTGCCGTCGGGCAAGAGCAGCCGGGTCAAGTCCATCGTCACCTACGAAGGTGAACTGGAAAACGCTGGCCCAGGCCAGGCCGTGACCCTGACCATGGaa           <  1:553570/150‑1 (MQ=255)
                                                                                                                                     gCACCATCGCCAGTGGCGTGGTGCACAAAGGTGACGAGATTGTCGTGCTGCCGTCGGGCAAGAGCAGCCGGGTCAAGTCCATCGTc                                                                       >  2:566904/1‑86 (MQ=255)
                                                                                                                                     gCACCATCGCCAGTGGCGTGGTGCACAAAGGTGACGAGATTGTCGTGCTGCCGTCGGGCAAGAGCAGCCGGGTCAAGTCCATCGTc                                                                       <  1:566904/86‑1 (MQ=255)
                                                                                                                                      gaCCATCGCCAGTGGCGTGGTGCACAAAGGTGACGAGATTGTCGTGCTGCCGTCGGGCAAGAGCAGCCGGGTAAAGTCCATCGTCACCTACGAAGGTGAACTGGAAAACGCTGGCCCAGGCCAGGCCGTGACCCTGACCATGGAAGAGga      <  2:948588/149‑1 (MQ=255)
                                                                                                                                          aTCGCCAGTGGCGTGGTGCACAAAGGTGACGAGATTGTCGTGCTGCCGGCGGGCAAGAGCAGCCGGGTCAAGTCCATCGTCACCTACGAAGGTGAACTGGAAAACGCTGGCCCAGGCCAGGCCGTGACCCTGACCATGGAAGACGAGATc  >  1:1105364/1‑150 (MQ=255)
                                                                                                                                                 |                                                                                                                                                
TGGTACGCCGGCCCGACGCTGATGGAAATCCTCGAAACCGTCGAGGTTTCGGCTGACCGCAACTTCACCGACCTGCGTTTC‑‑CCGGTGCAGTACGTCAACCGTCCCAACCTGAACTTCCGCGGCTTCGCGGGCACCATCGCCAGTGGCGTGGTGCACAAAGGTGACGAGATTGTCGTGCTGCCGTCGGGCAAGAGCAGCCGGGTCAAGTCCATCGTCACCTACGAAGGTGAACTGGAAAACGCTGGCCCAGGCCAGGCCGTGACCCTGACCATGGAAGACGAGATC  >  NC_002947/1491002‑1491286

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: