| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_002947 | 5,912,986 | Δ42 bp | coding (199‑240/1377 nt) | spuI → | glutamylpolyamine synthetase |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_002947 | 5912986 | 5913027 | 42 | 49 [0] | [0] 48 | spuI | glutamylpolyamine synthetase |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 5912985 | 0 (0.000) | 47 (1.020) | 40/244 | 0.2 | 100% | coding (198/1377 nt) | spuI | glutamylpolyamine synthetase |
| ? | NC_002947 | 5913028 = | 0 (0.000) | coding (241/1377 nt) | spuI | glutamylpolyamine synthetase | |||||
CTTAAGGAACATCCTGAGGTTCTCTACGTTGACCTTCTGATTGCAGATATGAATGGTGTGGTGCGTGGCAAGCGCATAGAGCGCACCAGCCTCCACAAGGTTTACGAGAAAGGCATCAATCTGCCGGCCTCCCTCTTTGCCCTGGACATCAACGGTTCCACCGTCGAAAGCACCGGGCTGGGCCTGGACATCGGCGATGCTGACCGCATCTGCTATCCAATCCCCGACACGCTCTGTAACGAGCCATGGCAAAAGCGCCCCACCGCCCAGCTGCTGATGACCATGCACGA > NC_002947/5912836‑5913125 | cTTAAGGAACATCCTGAGGTTCTCTACGTTGACCTTCTGAGTGCAGATATGAATGGTGTGGTGCGTGGCAAGCGCATAGAGCGCACCAGCCTCCACAAGGTTTACGAGAAAGGCATCAATCTGCCGGCCTCCCTCTTTGCCCTGGACATC > 1:1200815‑M1/1‑150 (MQ=255) gAACATCCTGAGGTTCTCTACGTTGACCTTCTGATTGCAGATATGAATGGTGTGGTGCGTGGCAAGCGCATAGAGCGCACCAGCCTCCACAAGGTTTACGAGAAAGGCATCAATCTGCCGGCCTCCCTCTTTGCCCTGGACATCggcgat > 1:650619‑M1/1‑144 (MQ=255) ggtggttacgttgACCTTCTGATTGCAGATATGAATGGTGTAGTGCGTGGCAAGCGCATAGAGCGCACCATCCTCCACAAGGTTTACGAGAAAGGCATCAATCTGCCGGTCTCCCTCTTTGCCCTGGACATCggccatgctgaccgcatc < 1:124082‑M1/144‑19 (MQ=255) gTTCTCTACGTTGACCTTCTGATTGCAGATATGAATGGTGTGGTGCGTGGCAAGCGCATAGAGCGCACCAGCCTCCACAAGGTTTACGAGAAAGGCATCAATCTGCCGGCCTCCCTCTTTGCCCTGGACATCggcgatgctgaccgcatc < 2:650619‑M1/150‑19 (MQ=255) tctcTACGTTGACCTTCTGATTGCAGATATGAATGGTGTGGTGCGTGGCAAGCGCATAGAGCGCACCAGCCTCCACAAGGTTTACGAGAAAGGCATCAATCTGCCGGCCTCCCTCTTTGCCCTGGACATCggcgatgctgaccgcatctg < 1:337085‑M1/150‑21 (MQ=255) ctctACGTTGACCTTCTGATTGCAGATATGAATGGTGTGGTGCGTGGCAAGCGCATAGAGCGCATCAGCCTCCACAAGGTTTACGAGAAAGGCATCAATCTGCCGGCCTCCCTCTTTGCCCTGGACATCggcgatgctgaccgcatctgc < 1:1090166‑M1/150‑22 (MQ=255) aCGTTGACCTTCTGATTGCAGATATGAATGGTGTGGTGCGTGGCAAGCGCATAGAGCGCACCAGCCTCCACAAGGTTTACGAGAAAGGCATCAATCTGCCGGCCTCCCTCTTTGCCCTGGACATCggcgatgctgaccgcatctgctatc < 1:747178‑M1/150‑26 (MQ=255) cTTCTGATTGCAGATATGAATGGTGTGGTGCGTGGCAAGCGCATAGAGCGCACCAGCCTCCACAAGGTTTACGAGAAAGGCATCAATCTGCCGGCCTCCCTCTTTGCCCTGGACATCggcgatgatgaccgcatctgctatccaatcccc < 2:1058747‑M1/150‑34 (MQ=255) atatGAATGGTGTGGTGCGTGGCAAGCGCATAGAGCGCACCAGCCTCCACAAGGTTTACGAGAAAGGCATCAATCTGCCGGCCTCCCTCTTTGCCCTGGACATCggcgatgctgac > 2:301671‑M1/1‑104 (MQ=255) atatGAATGGTGTGGTGCGTGGCAAGCGCATAGAGCGCACCAGCCTCCACAAGGTTTACGAGAAAGGCATCAATCTGCCGGCCTCCCTCTTTGCCCTGGACATCggcgatgctgac < 1:301671‑M1/116‑13 (MQ=255) gAATGGTGTGGTGCGTGGCAAGCGCATAGAGCGCACCAGCCTCCACAAGGTTTACGAGAAAGGCATCAATCTGCCGGCCTCCCTCTTTGCCCTGGACATCggcgat > 2:460082‑M1/1‑100 (MQ=255) gAATGGTGTGGTGCGTGGCAAGCGCATAGAGCGCACCAGCCTCCACAAGGTTTACGAGAAAGGCATCAATCTGCCGGCCTCCCTCTTTGCCCTGGACATCggcgat < 1:460082‑M1/106‑7 (MQ=255) aTGGTGTGGTGCGTGGCAAGCGCATAGAGCGCACCAGCCTCCACAAGGTTTACGAGAAAGGCATCAATCTGCCGGCCTCCCTCTTTGCCCTGGACATCggcgatgctgaccgcatctgctatccaatccccgacacgctctgtaacgagc < 2:815323‑M1/150‑53 (MQ=255) tggtgtggtgCGTGGCAAGCGCATAGAGCGCACCAGCCTCCACAAGGTTTACGAGAAAGGCATCAATCTGCCGGCCTCCCTCTTTGCCCTGGACATCggcgatgctgaccgcatctgctatccaatccccgacacgctctgtaacgagcc > 1:352026‑M1/1‑97 (MQ=255) tggtgtggtgCGTGGCAAGCGCATAGAGCGCACCAGCCTCCACAAGGTTTACGAGAAAGGCATCAATCTGCCGGCCTCCCTCTTTGCCCTGGACATCggcgatgctgaccgcatctgctatccaatccccgacacgctctgtaacgagcc > 2:760096‑M1/1‑97 (MQ=255) gtgtggtgCGTGGCAAGCGCATAGAGCGCACCAGCCTCCACAAGGTTTACGAGAAAGGCATCAATCTGCCGGCCTCCCTCTTTGCCCTGGACATCggcgatgctgac > 2:269552‑M1/1‑95 (MQ=255) gtgtggtgCGTGGCAAGCGCATAGAGCGCACCAGCCTCCACAAGGTTTACGAGAAAGGCATCAATCTGCCGGCCTCCCTCTTTGCCCTGGACATCggcgatgctgac < 1:269552‑M1/107‑13 (MQ=255) gcACCAGCCTCCACAAGGTTTACGAGAAAGGCATCAATCTGCCGGCCTCCCTCTTTGCCCTGGACATCggcgatgctgaccgcatctgctatccaatccccgacacgctctgtaacgagccatggcaaaagcgccccaccgcccagctgc < 1:760096‑M1/150‑83 (MQ=255) ccAGCCTCCACAAGGTTTACGAGAAAGGCATCAATCTGCCGGCCTCCCTCTTTGCCCTGGACATCggcgatgctgaccgcatctgctatccaatccccga > 2:444505‑M1/1‑65 (MQ=255) ccAGCCTCCACAAGGTTTACGAGAAAGGCATCAATCTGCCGGCCTCCCTCTTTGCCCTGGACATCggcgatgctgaccgcatctgctatccaatccccga < 1:444505‑M1/100‑36 (MQ=255) tCCACAAGGTTTACGAGAAAGGCATCAATCTGCCGGCCTCCCTCTTTGCCCTGGACATCggcgatgctgaccgcatctgctatccaatccccgacacgctctggaacgagccatggcaaaagcgccccaccgcccagctgctgatgacca > 2:142785‑M1/1‑59 (MQ=255) cacaAGGTTTACGAGAAAGGCATCAATCTGCCGGCCTCCCTCTTTGCCCTGGACATCggcgatgctgaccgcatctgctatccaatccccgacacgctctgtaacgagccatggcaaaagcgccccaccgcccagctgctgatgaccatg > 1:25036‑M1/1‑57 (MQ=255) caAGGTTTACGAGAAAGGCATCAATCTGCCGGCCTCCCTCTTTGCCCTGGACATCggcgatgctgaccgcatctgctatccaatccccgacacgctctgtaacgagccatggcaaaagcgccccaccgcccagctgctgatgaccatgc > 2:780414‑M1/1‑55 (MQ=255) caAGGTTTACGAGAAAGGCATCAATCTGCCGGCCTCCCTCTTTGCCCTGGACATCggcgatgctgaccgcatctgctatccaatccccgacacgctctgtaacgagccatggcaaaagcgccccaccgcccagctgctgatgaccatgc < 1:780414‑M1/149‑95 (MQ=255) aaGGTTTACGAGAAAGGCATCAATCTGCCGGCCTCCCTCTTTGCCCTGGACATCggcgatgctgaccgcatctgctatccaatccccgacacgctctgtaacgagccatggcaaaagcgccccaccgcccagctgctgat < 1:1169038‑M1/140‑87 (MQ=255) aaGGTTTACGAGAAAGGCATCAATCTGCCGGCCTCCCTCTTTGCCCTGGACATCggcgatgctgaccgcatctgctatccaatccccgacacgctctgtaacgagccatggcaaaagcgccccaccgcccagctgctgat > 2:1169038‑M1/1‑54 (MQ=255) gagaAAGGCATCAATCTGCCGGCCTCCCTCTTTGCCCTGGACATCggcgatgctgaccgcatctgctatccaatccccgacacgctctgtaacgagccatggcaaaagcgccccaccgcccagctgctgatgaccatgcacgagctggaa > 2:280410‑M1/1‑45 (MQ=255) gagaAAGGCATCAATCTGCCGGCCTCCCTCTTTGCCCTGGACATCggcgatgctgaccgcatctgctatccaatccccgacacgctctgtaacgagccatgacaaaagcgccccaccgcccagctgctgatgaccatgcacgagctggaa > 1:376101‑M1/1‑45 (MQ=255) gaAAGGCATCAATCTGCCGGCCTCCCTCTTTGCCCTGGACATCggcgatgctgaccgcatctgctatccaatccccgacacgctctgtaacgagccatggcaaaagcgccccaccgcccagctgctgatgaccatgcacgagctggaagg > 2:700474‑M1/1‑43 (MQ=255) cATCAATCTGCCGGCCTCCCTCTTTGCCCTGGACATCggcgatgctgaccgcatctgctatccaatccccgacacgctctgtaacgagccatggcaaaagcgccccaccgcccagctgctgatgaccatgcacgagctggaaggcgagcc < 2:352026‑M1/150‑114 (MQ=255) aTCAATCTGCCGGCCTCCCTCTTTTCCCTGGACATCggcgatgctgaccgcatctgctatccaatccccgacacgctctgtaacgagccatggcaaaagcgccccaccgcccagctgctgatgaccatgcacgagctggaaggcgagccg > 2:432586‑M1/1‑36 (MQ=255) aTCAATCTGCCGGCCTCCCTCTTTGCCCTGGACATCggcgatgctgaccgcatctgctatccaatccccgacacgctctgtaacgagccatggcaaaagcgccccaccgcccagctgctgatgaccatgcacgagctggaaggcgag > 1:1092781‑M1/1‑36 (MQ=255) aTCAATCTGCCGGCCTCCCTCTTTGCCCTGGACATCggcgatgctgaccgcatctgctatccaatccccgacacgctctgtaacgagccatggcaaaagcgccccaccgcccagctgctgatgaccatgcacgagctggaaggcgag < 2:1092781‑M1/147‑112 (MQ=255) aTCAATCTGCCGGCCTCCCTCTTTGCCCTGGACATCggcgatgctgaccgcatctgctatccaatccccgacacgctctgtaacgagccatggcaaaagcgccccaccgcccagctgctgatgaccatgcacgagctggaa < 2:199244‑M1/141‑106 (MQ=255) aTCAATCTGCCGGCCTCCCTCTTTGCCCTGGACATCggcgatgctgaccgcatctgctatccaatccccgacacgctctgtaacgagccatggcaaaagcgccccaccgcccagctgctgatgaccatgcacgagctggaa > 1:199244‑M1/1‑36 (MQ=255) tCAATCTGCCGGCCTCCCTCTTTGCCCTGGACATCggcgatgctgaccgcatctgctatccaatccccgacacgctctgtaacgagccatggcaaaagcgccccaccgcccagctgctgatgaccatgcacgagctggaa < 1:1120571‑M1/140‑106 (MQ=255) tCAATCTGCCGGCCTCCCTCTTTGCCCTGGACATCggcgatgctgaccgcatctgctatccaatccccgacacgctctgtaacgagccatggcaaaagcgccccaccgcccagctgctgatgaccatgcacgagctggaa > 2:1120571‑M1/1‑35 (MQ=255) aaTCTGCCGGCCTCCCTCTTTGCCCTGGACATCggcgatgctgaccgcatctgctatccaattcccgacacgctctgtaacgagccatggcaaaagcgccccaccgcccagctgctgatgaccatgcacgagctggaaggcgagccgttc > 2:112327‑M1/1‑33 (MQ=255) gCCGGCCTCCCTCTTTGCCCTGGACATCggcgatgctgaccgcatctgctatccaatccccgacacgctctgtaacgagccatggcaaaagcgccccaccgcccagctgctgatgaccatgcacgagctggaaggcgagccgttcttcgc < 1:142785‑M1/150‑123 (MQ=255) ggCCTCCCTCTTTGCCCTGGACATCggcgatgctgaccgcatctgctatccaatccccgacacgctctgtaacgagccatggcaaaagcgccccaccgcccagctgctgatgaccatgcacgagctggaaggcgagccgttcttcgccga > 2:419055‑M1/1‑25 (MQ=255) gCCTCCCTCTTTGCCCTGGACATCggcgatgctgaccgcatctgctatccaatccccgacacgctctgtaacgagccatggcaaaagcgccccaccgcccagctgctgatgaccatgcacgagctggaaggcgagccgttcttc < 2:96902‑M1/144‑121 (MQ=255) gCCTCCCTCTTTGCCCTGGACATCggcgatgctgaccgcatctgctatccaatccccgacacgctctgtaacgagccatggcaaaagcgccccaccgcccagctgctgatgaccatgcacgagctggaaggcgagccgttcttc > 1:96902‑M1/1‑24 (MQ=255) tccctcTTTGCCCTGGACATCggcgatgctgaccgcatctgctatccaatccccgacacgctctgtaacgagccatggcaaaagcgccccaccgcccagctgctgatga < 2:742405‑M1/109‑89 (MQ=255) tccctcTTTGCCCTGGACATCggcgatgctgaccgcatctgctatccaatccccgacacgctctgtaacgagccatggcaaaagcgccccaccgcccagctgctgatga > 1:742405‑M1/1‑21 (MQ=255) ccctcTTTGCCCTGGACATCggcgatgctgaccgcatctgctatccaatccccgacacgctctgtaacgagccatggcaaaagcgccccaccgcccagctgctgatgaccatgcacgagctggaaggcgagccgttcttcgccgacccgc > 2:1139117‑M1/1‑20 (MQ=255) cctcTTTGCCCTGGACATCggcgatgctgaccgcatctgctatccaatccccgacacgctctgtaacgagccatggcaaaagcgccccaccgcccagctgctgatgaccatgcacgagctggaaggcgagccgttcttcgccgacccgcg > 1:1088396‑M1/1‑19 (MQ=255) tttGCCCTGGACATCggcgatgctgaccgcatctgctatccaatccccgacacgctc < 2:547973‑M1/57‑43 (MQ=255) tttGCCCTGGACATCggcgatgctgaccgcatctgctatccaatccccgacacgctc > 1:547973‑M1/1‑15 (MQ=255) ccTGGACATCggcgatgctgaccgcatctgctatccaatccccgacacgctctgtaacgagccatggcaaaagcgccccaccgcccagctgctgatgaccatgcacgagctggaaggcgagccgttcttcgccgacccgcgcgaagtgct < 1:700474‑M1/150‑141 (MQ=255) | CTTAAGGAACATCCTGAGGTTCTCTACGTTGACCTTCTGATTGCAGATATGAATGGTGTGGTGCGTGGCAAGCGCATAGAGCGCACCAGCCTCCACAAGGTTTACGAGAAAGGCATCAATCTGCCGGCCTCCCTCTTTGCCCTGGACATCAACGGTTCCACCGTCGAAAGCACCGGGCTGGGCCTGGACATCGGCGATGCTGACCGCATCTGCTATCCAATCCCCGACACGCTCTGTAACGAGCCATGGCAAAAGCGCCCCACCGCCCAGCTGCTGATGACCATGCACGA > NC_002947/5912836‑5913125 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |