New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 5477138 =99 (0.740)24 (0.260) 16/178 6.4 29.7% intergenic (+3/+109) PP_4813/PP_4814 PAP2 family protein/DedA family protein/ATP‑dependent protease La domain‑containing protein
?NC_002947 5477237 = 46 (0.500)intergenic (+102/+10) PP_4813/PP_4814 PAP2 family protein/DedA family protein/ATP‑dependent protease La domain‑containing protein
Rejected: Coverage evenness skew score above cutoff.

Only 100 of 107 total aligned reads displayed.

TATTCGCGGGTAAACCCGCTCCTACGCACGGGATCGCGCTTATCGTAGGAGCGGGTTTACCCGCGAATAGGCCGGCACAGGCAATACAGAACCATCAGGCGAACAACTCCCCCTGAATCCGCTCCAGCAGCTTCTGGATCTCGCC‑CAGCCGCTGCTGTGGCGAATCGAGGGTCAGCAGGTCCAGCTTGTCCTCTTCCATGAACGGCAACAGGTACGCCAGCTGATTGGCCAGCG  >  NC_002947/5477153‑5477386
                                                                                    |                                                                                                                                                      
tATTCGCGGGTAAACCCGCTCCTACGCACGGGATCGCGCTTATCGTAGGAGCGGGTTTACCCGCGAATAGGCCGGCACAGGCAATACAGAACCATCAGGCGAACAACTCCCCCTGAATCCGCTCCagcagc                                                                                                          >  2:1463857/1‑131 (MQ=255)
tATTCGCGGGTAAACCCGCTCCTACGCACGGGATCGCGCTTATCGTAGGAGCGGGTTTACCCGCGAATAGGCCGGCACAGGCAATACAGAACCATCAGGCGAACAACTCCCCCTGAATCCGCTCCagcagc                                                                                                          <  1:1463857/131‑1 (MQ=255)
     gcgGGTAAACCCGCTCCTACGCACGGGATCGCGCTTATCGTAGGAGCGGGTTTACCCGCGAATAGGCCGGCACAGGCAATACAGAACCATCAGGCGAACAACt                                                                                                                                 >  1:3396921/1‑103 (MQ=255)
     gcgGGTAAACCCGCTCCTACGCACGGGATCGCGCTTATCGTAGGAGCGGGTTTACCCGCGAATAGGCCGGCACAGGCAATACAGAACCATCAGGCGAACAACt                                                                                                                                 <  2:3396921/103‑1 (MQ=255)
     gcgGGTAAACCCGCTCCTACGCACGGGATCGCGCTTATCGTAGGAGCGGGTTTACCCGCGAATAGGCCGGCACAGGCAATACAGAACCATCAGGCGAACAACTCCCCCTGAATCCGCTCCAGCAGCTTCTGGATCTCGCC‑CAGCCgctgc                                                                                 >  2:1644200/1‑150 (MQ=255)
       gggTAAACCCGCTCCTACGCACGGGATCGCGCTTATCGTAGGAGCGGGTTTACCCGCGAATAGGCCGGCACAGGCAATACAGAACCATCAGGCGAACAACTCCCCCTGAATCCGCTCCAGCAGCTTCTGGa                                                                                                   >  1:8668/1‑131 (MQ=255)
       gggTAAACCCGCTCCTACGCACGGGATCGCGCTTATCGTAGGAGCGGGTTTACCCGCGAATAGGCCGGCACAGGCAATACAGAACCATCAGGCGAACAACTCCCCCTGAATCCGCTCCAGCAGCTTCTGGa                                                                                                   <  2:8668/131‑1 (MQ=255)
         gTAAACCCGCTCCTACGCACGGGATCGCGCTTATCGTAGGAGCGGGTTTACCCGCGAATAGGCCGGCACAGGCAATACAGAACCATCAGGCGAACAACTCCCCCTGAATCCGCTCCAGCAGCTTCTGGATCTCGCC‑CAGCCGCTGCtgtg                                                                             >  2:853737/1‑150 (MQ=255)
           aaaCCCGCTCCTACGCACGGGATCGCGCTTATCGTAGGAGCGGGTTTACCCGCGAATAGGCCGGCACAGGCAATACAGAACCATCAGGCGAACAACTCCCCCTGAATCCGCTCCAGCAGCTTCTGGATCTCGCC‑CAGCCGCTGCTGTGGc                                                                           >  2:1179853/1‑150 (MQ=255)
            aaCCCGCTCCTACGCACGGGATCGCGCTTATCGTAGGAGCGGGTTTACCCGCGAATAGGCCGGCACAGGCAATACAGAACCATCAGGCGAACAACTCCCCCTGAATCCGCTCCAGCAGCTTc                                                                                                       >  1:1317778/1‑122 (MQ=255)
            aaCCCGCTCCTACGCACGGGATCGCGCTTATCGTAGGAGCGGGTTTACCCGCGAATAGGCCGGCACAGGCAATACAGAACCATCAGGCGAACAACTCCCCCTGAATCCGCTCCAGCAGCTTc                                                                                                       <  2:1317778/122‑1 (MQ=255)
             aCCCGCTCCTACGCACGGGATCGCGCTTATCGTAGGAGCGGGTTTACCCGCGAATAGGCCGGCACAGGCAATACAGAACCATCAGGCGAACCCAAGCATTACGAGCCGCTCCAGCAGCTTCTGGATCTCGCC‑CAGCCGCTGCTGTGGCGa                                                                         >  2:2630300/1‑150 (MQ=37)
             aCCCGCTCCTACGCACGGGATCGCGCTTATCGTAGGAGCGGGTTTACCCGCGAATAGGCCGACACAGGCAATACAGAACCATCAGGCGAACAACTCCCCCTGAATCCGCTCCAGCAGCTTCTGGATCTCGCC‑CAGCCGCTGCTGTGGCGa                                                                         >  1:1432616/1‑150 (MQ=255)
              cccGCTCCTACGCACGGGATCGCGCTTATCGTAGGAGCGGGTTTACCCGCGAATAGGCCGGCACAGGCAATACAGAACCATCAGGCGaa                                                                                                                                      >  1:1287176/1‑89 (MQ=255)
              cccGCTCCTACGCACGGGATCGCGCTTATCGTAGGAGCGGGTTTACCCGCGAATAGGCCGGCACAGGCAATACAGAACCATCAGGCGaa                                                                                                                                      <  2:1287176/89‑1 (MQ=255)
              cccGCTCCTACGCACGGGATCGCGCTTATCGTAGGAGCGGGTTTACCCGCGAATAGGCCGGCACAGGCAATACAGAACCATCAGGCGAACAACTCCCCCTGAATCCGCTCCAGCAGCTTc                                                                                                       <  1:1690484/120‑1 (MQ=255)
              cccGCTCCTACGCACGGGATCGCGCTTATCGTAGGAGCGGGTTTACCCGCGAATAGGCCGGCACAGGCAATACAGAACCATCAGGCGAACAACTCCCCCTGAATCCGCTCCAGCAGCTTc                                                                                                       >  2:1690484/1‑120 (MQ=255)
              cccGCTCCTACGCACGGGATCGCGCTTATCGTAGGAGCGGGTTTACCCGCGAATAGGCCGGCACAGGCAATACAGAACCATCAGGCGAACAACTCCCCCTGAATCCGCTCCAGCAGCTTCTGGa                                                                                                   <  1:425813/124‑1 (MQ=255)
              cccGCTCCTACGCACGGGATCGCGCTTATCGTAGGAGCGGGTTTACCCGCGAATAGGCCGGCACAGGCAATACAGAACCATCAGGCGAACAACTCCCCCTGAATCCGCTCCAGCAGCTTCTGGa                                                                                                   >  2:425813/1‑124 (MQ=255)
              cccGCTCCTACGCACGGGATCGCGCTTATCGTAGGAGCGGGTTTACCCGCGAATAGGCCGGCACAGGCAATACAGAACCATCAGGCGAACAACTCCCCCTGAATCCGCTCCAGCAGCTTCTGGATCTCGCC‑CAGCCGCTGCTGTGGCGaa                                                                        >  1:103790/1‑150 (MQ=255)
              cccGCTCCTACGCACGGGATCGCGCTTATCGTAGGAGCGGGTTTACCCGCGAATAGGCCGGCACAGGCAATACAGAACCATCAGGCGAACAACTCCCCCTGAATCCGCTCCAGCAGCTTCTGGATCTCGCC‑CAGCCGCTGCTGTGGCGaa                                                                        >  1:1336216/1‑150 (MQ=255)
              cccGCTCCTACGCACGGGATCGCGCTTAGCGTAGGAGCGGGTTTACCCGCGAATAGGCCGGCACAGGCAATACAGAACCATCAGGCGAACAACTCCCCCTGAATCCGCTCCAGCAGCTTCTGGATCTCGCC‑CAGCCGCTGCTGTGGCGaa                                                                        >  2:2439829/1‑150 (MQ=255)
               ccGCTCCTACGCACGGGATCGCGCTTATCGTAGGAGCGGGTTTACCCGCGAATAGGCCGGCACAGGCAATACAGaa                                                                                                                                                  >  2:2807754/1‑76 (MQ=255)
               ccGCTCCTACGCACGGGATCGCGCTTATCGTAGGAGCGGGTTTACCCGCGAATAGGCCGGCACAGGCAATACAGaa                                                                                                                                                  <  1:2807754/76‑1 (MQ=255)
               ccGCTCCTACGCACGGGATCGCGCTTATCGTAGGAGCGGGTTTACCCGCGAATAGGCCGGCACAGGCAATACAGAACCATCAGGCGAACAACTCCCCCTGAATCCGCTCCAGCAGCTTCTGGATCTCGCC‑CAGCCGCTGCTGTGGCGAAt                                                                       >  2:1846649/1‑150 (MQ=255)
               ccGCTCCTACGCACGGGATCGCGCTTATCGTAGGAGCGGGTTTACCCGCGAATAGGCCGGCACAGGCAATACAGAACCATCAGGCGAACAACTCCCCCTGAATCCGCTCCAGCAGCTTCTGGATCTCGCC‑CAGCCGCTGCTGTGGCGAAt                                                                       >  2:350249/1‑150 (MQ=255)
                 gCTCCTACGCACGGGATCGCGCTTATCGTAGGAGCGGGTTTACCCGCGAATAGGCCGGCACAGGCAATACAGAACCATCa                                                                                                                                            <  1:139194/80‑1 (MQ=255)
                   tCCTACGCACGGGATCGCGCTTATCGTAGGAGCGGGTTTACCCGCGAATAGGCCGGCACAGGCAATACAGAACCATCAGGCGAACAACTCCCCCTGAATCCGCTCCAGCAGCTTCTGGATCTCGCC‑CAGCCGCTGCTGTGGCGAATCGAg                                                                   <  1:350249/150‑1 (MQ=255)
                     cTACGCACGGGATCGCGCTTATCGTAGGAGCGGGTTTACCCGCGAATAGGCCGGCACAGGCAATACAGAACCATCAGGCGAACAACTCCCCCTGAATCCGCTCCAGCAGCTTCTGGATCTCGCC‑CAGCCGCTGCTGTGGCGAATCGAggg                                                                 >  1:2392531/1‑150 (MQ=255)
                     cTACGCACGGGATCGCGCTTATCGTAGGAGCGGGTTTACCCGCGAATAGGCCGGCACAGGCAATACAGAACCATCAGGCGAACAACTCCCCCTGAATCCGCTCCAGCAGCTTCTGGATCTCGCC‑CAGCCGCTGCTGTGGCGAACCGAggg                                                                 >  1:3080760/1‑150 (MQ=255)
                         gCACGGGATCGCGCTTATCGTAGGAGCGGGTTTACCCGCGAATAGGCCGGCACAGGCAATACAGAACCAt                                                                                                                                              >  1:996095/1‑70 (MQ=255)
                           aCGGGATCGCGCTTATCGTAGGAGCGGGTTTACCCGCGAATAGGCCGGCACAGGCAATACAGAACCATCAGGCGAACAACTCCCCCTGAATCCGCTCCAGCAGCTTCTGGATCTCGCC‑CAGCCGCTGCTGTGGCGAATCGAGGGTcagca                                                           >  1:2540866/1‑150 (MQ=255)
                                 tCGCGCTTATCGTAGGAGCGGGTTTACCCGCGAATAGGCCGGCACAGGCAATACAGAACCATCAGGCGAACAACTCCCCCTGAATCCGCTCCAGCAGCTTCTGGATCTCGCCACAGCAGCGGCTG‑GGCGagatcc                                                                    >  2:274104/1‑130 (MQ=37)
                                   gcgcTTATCGTAGGAGCGGGTTTACCCGCGAATAGGCCGGCACAGGCAATACAGAACCATCAGGCGAACAACTCCCCCTGAATCCGCTCCAGCAGCTTCTGGATCTCGCC‑CAGCCGCTGCTGTGGCGAATCGAGGGTCAGCAGGTCCAGc                                                   >  1:984189/1‑150 (MQ=255)
                                    cgcTTATCGTAGGAGCGGGTTTACCCGCGAATAGGCCGGCACAGGCAATACAGAACCATCAGGCGAACAACTCCCCCTGAATCCGCTCCAGCAGCTTCTGGATCTCGCC‑CAGCCGCTGCTGTGGCGAATCGAGGGTCAGCAGGTCCAGCt                                                  >  1:3189175/1‑150 (MQ=255)
                                     gcTTATCGTAGGAGCGGGTTTACCCGCGAATAGGCCGGCACAGGCAATACAGAACCATCAGGCGaacaa                                                                                                                                   >  1:143331/1‑69 (MQ=255)
                                     gcTTATCGTAGGAGCGGGTTTACCCGCGAATAGGCCGGCACAGGCAATACAGAACCATCAGGCGaacaa                                                                                                                                   <  2:143331/69‑1 (MQ=255)
                                     gcTTATCGTAGGAGCGGGTTTACCCGCGAATAGGCCGGCACAGGCAATACAGAACCATCAGGCGAACAACTc                                                                                                                                <  2:82499/72‑1 (MQ=255)
                                     gcTTATCGTAGGAGCGGGTTTACCCGCGAATAGGCCGGCACAGGCAATACAGAACCATCAGGCGAACAACTc                                                                                                                                >  1:82499/1‑72 (MQ=255)
                                      cTTATCGTAGGAGCGGGTTTACCCGCGAATAGGCCGGCACAGGCAATACAGAACCATCAGGCGAACAACTCCCCCTGAATCCGCTCCAGCAGCTTCTGGATCTCGCC‑CAGCCGCTGCTGTGGCGAATCGAGGGTCAGCAGGTCCAGCTTg                                                >  2:875692/1‑150 (MQ=255)
                                       ttATCGTAGGAGCGGGTTTACCCGCGAATAGGCCGGCACAGGCAATACAGAACCATCa                                                                                                                                            <  1:2923548/58‑1 (MQ=255)
                                       ttATCGTAGGAGCGGGTTTACCCGCGAATAGGCCGGCACAGGCAATACAGAACCATCa                                                                                                                                            >  2:2923548/1‑58 (MQ=255)
                                       ttATCGTAGGAGCGGGTTTACCCGCGAATAGGCCGGCACAGGCAATACAGAACCATCAGGCGAACAACTCCCCCTGAATCCGCTCCAGCAGCTTCTGGATCTCGCC‑CAGCCGCTGCTGTGGCGAATCGAGGGTCAGCAGGTCCAGCTTGt                                               <  1:1179853/150‑1 (MQ=255)
                                           cGTAGGAGCGGGTTTACCCGCGAATAGGCCGGCACAGGCAATACAGAACCATCAGGCGAACAACTCCCCCTGAATCCGCTCCAGCAGCTTCTGGATCTCGCC‑CAGCCGCTGCtgtg                                                                             >  1:2594695/1‑116 (MQ=255)
                                           cGTAGGAGCGGGTTTACCCGCGAATAGGCCGGCACAGGCAATACAGAACCATCAGGCGAACAACTCCCCCTGAATCCGCTCCAGCAGCTTCTGGATCTCGCC‑CAGCCGCTGCtgtg                                                                             <  2:2594695/116‑1 (MQ=255)
                                             tAGGAGCGGGTTTACCCGCGAATAGGCCGGCACAGGCAATACAGAACCATCAGGCGAACAACTCCCCCTGAATCCGCTCCAGCAGCTTCTGGATCTCGCC‑CAGCCGCTGCTGTGGCGAATCGAGGGTCAGCAGGTCCAGCTTGTc                                              <  1:2727703/145‑1 (MQ=255)
                                             tAGGAGCGGGTTTACCCGCGAATAGGCCGGCACAGGCAATACAGAACCATCAGGCGAACAACTCCCCCTGAATCCGCTCCAGCAGCTTCTGGATCTCGCC‑CAGCCGCTGCTGTGGCGAATCGAGGGTCAGCAGGTCCAGCTTGTc                                              >  2:2727703/1‑145 (MQ=255)
                                               ggAGCGGGTTTACCCGCGAATAGGCCGACACAGGCAATACAGAACCATCAGGCGAACAACTCCCCCTGAATCCGCTCCAGCAGCTTCTGGATCTCGCC‑CAGCCGCTGCTGTGGCGAATCGAGGGTCAGCAGGTCCAGCTTGTCCTCTTcc                                       <  2:1432616/150‑1 (MQ=255)
                                                  gCGGGTTTACCCGCGAATAGGCCGGCACAGGCAATACAGAACCATCAGGCGAACAACTcccc                                                                                                                             <  1:1931664/62‑1 (MQ=255)
                                                  gCGGGTTTACCCGCGAATAGGCCGGCACAGGCAATACAGAACCATCAGGCGAACAACTcccc                                                                                                                             <  1:1931545/62‑1 (MQ=255)
                                                  gCGGGTTTACCCGCGAATAGGCCGGCACAGGCAATACAGAACCATCAGGCGAACAACTcccc                                                                                                                             >  2:1931664/1‑62 (MQ=255)
                                                  gCGGGTTTACCCGCGAATAGGCCGGCACAGGCAATACAGAACCATCAGGCGAACAACTcccc                                                                                                                             >  2:1931545/1‑62 (MQ=255)
                                                   cGGGTTTACCCGCGAATAGGCCGGCACAGGCAATACAGAACCATCAGGCGAACAACTCCCCCTGAATCCGCTCCAGCAGCTTCTGGATCTCGCC‑CAGCCGCTGCTGTGGCGAATCGAg                                                                   <  1:2382065/118‑1 (MQ=255)
                                                     ggTTTACCCGCGAATAGGCCGGCACAGGCAATACAGAACCATCAGGCGAACAACTCCCCCTGAATCCGCTCCAGCAGCTTCTGGATCTCGCC‑CAGCCGCTGCTGTGGCGAATCGAGGGTCAGCAGGTCCAGCTTGTCCTCTTCCATGAAc                                 >  2:581635/1‑150 (MQ=255)
                                                     ggTTTACCCGCGAATAGGCCGGCACAGGCAATACAGAACCATCAGGCGAACAACTCCCCCTGAATCCGCTCCAGCAGCTTCTGGATCTCGCC‑CAGCCGCTGCTGTGGCGAATCGAGGGTCAGCAGGTCCAGCTTGTCCTCTTCCATGAAc                                 <  1:809256/150‑1 (MQ=255)
                                                      gTTTACCCGCGAATAGGCCGGCACAGGCAATACAGAACCATCAGGCGAACAACTCCCCCTGAATCCGCTCCAGCAGCTTCTGGATCTCGCC‑CAGCCGCTGCTGTGGCGAATCGAGGGTCAGCAGGTCCAGCTTGTc                                              <  1:14541/136‑1 (MQ=255)
                                                      gTTTACCCGCGAATAGGCCGGCACAGGCAATACAGAACCATCAGGCGAACAACTCCCCCTGAATCCGCTCCAGCAGCTTCTGGATCTCGCC‑CAGCCGCTGCTGTGGCGAATCGAGGGTCAGCAGGTCCAGCTTGTc                                              >  2:14541/1‑136 (MQ=255)
                                                      gTTTACCCGCGAATAGGCCGGCACAGGCAATACAGAACCATCAGGCGAACAACTCCCCCTGAATCCGCTCCAGCAGCTTCTGGATCTCGCC‑CAGCCGCTGCTGTGGCGAATCGAGGGTCAGCAGGTCCAGCTTGTCCTCTTCCATGAACg                                >  1:786468/1‑150 (MQ=255)
                                                       tttACCCGCGAATAGGCCGGCACAGGCAATACAGAACCATCAGGCGAACAACTCCCCCTGAATCCGCTCCAGCAGCTTCTGGATCTCGCC‑CAGCCGCTGCTGTGGCGAATCGAGGGTCAGCAGGTCCAGCTTGTCCTCTTCCATGAACgg                               <  2:2540866/150‑1 (MQ=255)
                                                           cccGCGAATAGGCCGGCACAGGCAATACAGAACCATCAGGCGAACAACTCCCCCTGAATCCGCTCCAGCAGCTTCTGGATCTCGCC‑CAGCCGCTGCTGTGGCGAATCGAGGGTCAGCAGGTCCAGCTTGTCCTCTTCCAt                                     <  2:574791/140‑1 (MQ=255)
                                                           cccGCGAATAGGCCGGCACAGGCAATACAGAACCATCAGGCGAACAACTCCCCCTGAATCCGCTCCAGCAGCTTCTGGATCTCGCC‑CAGCCGCTGCTGTGGCGAATCGAGGGTCAGCAGGTCCAGCTTGTCCTCTTCCAt                                     >  1:574791/1‑140 (MQ=255)
                                                           cccGCGAATAGGCCGGCACAGGCAATACAGAACCATCAGGCGAACAACTCCCCCTGAATCCGCTCCAGCAGCTTCTGGATCTCGCC‑CAGCCGCTGCTGTGGCGAATCGAGGGTCAGCAGGTCCAGCTTGTCCTCTTCCATGAACGGCAAc                           >  2:2819850/1‑150 (MQ=255)
                                                            ccGCGAATAGGCCGGCACAGGCAATACAGAACCATCAGGCGAACAACTCCCCCTGAATCCGCTCCAGCAGCTTCTg                                                                                                     <  1:1934639/76‑1 (MQ=255)
                                                            ccGCGAATAGGCCGGCACAGGCAATACAGAACCATCAGGCGAACAACTCCCCCTGAATCCGCTCCAGCAGCTTCTg                                                                                                     >  2:1934639/1‑76 (MQ=255)
                                                            ccGCGAATAGGCCGGCACAGGCAATACAGAACCATCAGGCGAACAACTCCCCCTGAATCCGCTCCAGCAGCTTCTGGATCTCGCC‑CAGCCGCTGCTGTGGCGAATCGa                                                                    <  2:1196916/108‑1 (MQ=255)
                                                            ccGCGAATAGGCCGGCACAGGCAATACAGAACCATCAGGCGAACAACTCCCCCTGAATCCGCTCCAGCAGCTTCTGGATCTCGCC‑CAGCCGCTGCTGTGGCGAATCGa                                                                    >  1:1196916/1‑108 (MQ=255)
                                                            ccGCGAATAGGCCGGCACAGGCAATACAGAACCATCAGGCGAACAACTCCCCCTGAATCCGCTCCAGCAGCTTCTGGATCTCGCC‑CAGCCGCTGCTGTGGCGAATCGAGGGTCAGCAGGTCCAGCTTGTCCTCTTCCATGAACGGCAACa                          >  2:779372/1‑150 (MQ=255)
                                                            ccGCGAATAGGCCGGCACAGGCAATACAGAACCATCAGGCGAACAACTCCCCCTGAATCCGCTCCAGCAGCTTCTGGATCTCGCC‑CAGCCGCTGCTGTGGCGAATCGAGGGTCAGCAGGTCCAGCTTGTCCTCTTCCATGAACGGCAACa                          >  2:1848164/1‑150 (MQ=255)
                                                            ccGCGAATAGGCCGGCACAGGCAATACAGAACCATCAGGCGAACAACTCCCCCTGAATCCGCTCCAGCAGCTTCTGGATCTCGCC‑CAGCCGCTGCTGTGGCGAATCGAGGGTCAGCAGGTCCAGCTTGTCCTCTTCCATGAACGGCAACa                          >  1:2337433/1‑150 (MQ=255)
                                                            ccGCGAATAGGCCGGCACAGGCAATACAGAACCATCAGGCGAACAACTCCCCCTGAATCCGCTCCAGCAGCTTCTGGATCTCGCC‑CAGCCGCTGCTGTGGCGAATCGAGGGTCAGCAGGTCCAGCTTGTCCTCTTCCATGAACGGCAACa                          <  1:875692/150‑1 (MQ=255)
                                                            ccGCGAATAGGCCGGCACAGGCAATACAGAACCATCAGGCGAACAACTCCCCCTGAATCCGCTCCAGCAGCTTCTGGATCTCGCC‑CAGCCGCTGCTGTGGCGAATCGAGGGTCAGCAGGTCCAGCTTGTCCTCTTCCATGAACGGCAACa                          >  1:3277605/1‑150 (MQ=255)
                                                            ccGCGAATAGGCCGGCACAGGCAATACAGAACCATCAGGCGAACAACTCCCCCTGAATCCGCTCCAGCAGCTTCTGGATCTCGCC‑CAGCCGCTGCTGTGGCGAATCGAGGGTCAGCAGGTCCAGCTTGTCCTCTTCCATGAACGGCAACa                          >  1:1639236/1‑150 (MQ=255)
                                                             cgcgAATAGGCCGGCACAGGCAATACAGAACCATCAGGCGAACAACTCCCCCTGAATCCGCTCCAGCAGCTTCTGGATCTCGCC‑CAGCCGCTGCTGTGGCGAATCGAGGGTCAGCAGGTCCAGCTTGTCCTCTTCCATGAACGGCAAc                           >  2:3142592/1‑148 (MQ=255)
                                                             cgcgAATAGGCCGGCACAGGCAATACAGAACCATCAGGCGAACAACTCCCCCTGAATCCGCTCCAGCAGCTTCTGGATCTCGCC‑CAGCCGCTGCTGTGGCGAATCGAGGGTCAGCAGGTCCAGCTTGTCCTCTTCCATGAACGGCAAc                           <  1:3142592/148‑1 (MQ=255)
                                                                 aaTAGGCCGGCACAGGCAATACAGAACCATCAGGCGAACAACTCCCCCTGAATCCGCTCCAGCAGCTTCTGGATCTCGCC‑CAGcc                                                                                      >  1:1018705/1‑85 (MQ=255)
                                                                 aaTAGGCCGGCACAGGCAATACAGAACCATCAGGCGAACAACTCCCCCTGAATCCGCTCCAGCAGCTTCTGGATCTCGCC‑CAGcc                                                                                      <  2:1018705/85‑1 (MQ=255)
                                                                      gCCGGCACAGGCAATACAGAACCATCAGGCGAACAACTCCCCCTGAATCCGCTCCAGCAGCTTCTGGATCTCGCC‑CAGCCgctg                                                                                  <  1:298948/84‑1 (MQ=255)
                                                                      gCCGGCACAGGCAATACAGAACCATCAGGCGAACAACTCCCCCTGAATCCGCTCCAGCAGCTTCTGGATCTCGCC‑CAGCCgctg                                                                                  >  2:298948/1‑84 (MQ=255)
                                                                      gCCGGCACAGGCAATACAGAACCATCAGGCGAACAACTCCCCCTGAATCCGCTCCAGCAGCTTCTGGATCTCGCC‑CAGCCGCTGCTGTGGCGAATCGAGGGTcagcag                                                          <  2:2489365/108‑1 (MQ=255)
                                                                      gCCGGCACAGGCAATACAGAACCATCAGGCGAACAACTCCCCCTGAATCCGCTCCAGCAGCTTCTGGATCTCGCC‑CAGCCGCTGCTGTGGCGAATCGAGGGTcagcag                                                          >  1:2489365/1‑108 (MQ=255)
                                                                      gCCGGCACAGGCAATACAGAACCATCAGGCGAACAACTCCCCCTGAATCCGCTCCAGCAGCTTCTGGATCTCGCC‑CAGCCGCTGCTGTGGCGAATCGAGGGTCAGCAGGTCCAGCTTGTCCTCTTCCATGAACGGCAACAGGTACGCCAg                >  2:500709/1‑150 (MQ=255)
                                                                      gCCGGCACAGGCAATACAGAACCATCAGGCGAACAACTCCCCCTGAATCCGCTCCAGCAGCTTCTGGATCTCGCC‑CAGCCGCTGCTGTGGCGAATCGAGGGTCAGCAGGTCCAGCTTGTCCTCTTCCATGAACGGCAACAGGTACGCCAg                >  1:183561/1‑150 (MQ=255)
                                                                        cGGCACAGGCAATACAGAACCATCAGGCGAACAACTCCCCCTGAATCCGCTCCAGCAGCTTCTGGATCTCGCC‑CAGCCGCTGCTGTGGCGAATCGAGGGTCAGCAGGTCCAGCTTGTCCTCTTCCATGAACGGCAACAGGTACGCCAGCt              >  1:1162973/1‑150 (MQ=255)
                                                                        cGGCACAAAAAATACAAGACCAAAAGGGGATCAACTCCCGCTGGAGGCGCTCCATCAGCGTCTGGCTCTCGCC‑CACACGCTCCAGTCGCGCATAGACGGCCTCAAGGTCCACCCGTACCGCCTCCATGAACGGCAACAGGTACGCCAGCt              >  2:735574/1‑150 (MQ=255)
                                                                           cacaGGCAATACAGAACCATCAGGCGAACAACTCCCCCTGAATCCGCTCCAGCAGCTTCTGGATCTCGCC‑CAGCCGCTGCTGTGGc                                                                           <  2:2600045/86‑1 (MQ=255)
                                                                           cacaGGCAATACAGAACCATCAGGCGAACAACTCCCCCTGAATCCGCTCCAGCAGCTTCTGGATCTCGCC‑CAGCCGCTGCTGTGGCGAATCGAGGGTCAGCAGGTCCAGCTTGTCCTCTTCCATGAACGGCAACAGGTACGCCAGCTGAt           <  2:2337433/150‑1 (MQ=255)
                                                                           cacaGGCAATACAGAACCATCAGGCGAACAACTCCCCCTGAATCCGCTCCAGCAGCTTCTGGATCTCGCC‑CAGCCGCTGCTGTGGCGAATCGAGGGTCAGCAGGTCCAGCTTGTCCTCTTCCATGAACGGCAACAGGTACGCCAGCTGAt           >  1:2315474/1‑150 (MQ=255)
                                                                            acaGGCAATACAGAACCATCAGGCGAACAACTCCCCCTGAATCCGCTCCAGCAGCTTCTGGATCTCGCC‑CAGCCGCTGCTGTGGCGAATCGa                                                                    <  2:1341817/92‑1 (MQ=255)
                                                                            acaGGCAATACAGAACCATCAGGCGAACAACTCCCCCTGAATCCGCTCCAGCAGCTTCTGGATATCGCC‑TAGCCGCTGCTGTGGCGAATCGa                                                                    >  1:1341817/1‑92 (MQ=255)
                                                                             caGGCAATACAGAACCATCAGGCGAACAACTCCCCCTGAATCCGCTCCAGCAGCTTCTGGATCTCGCC‑CAGCCGCTGCTGTGGCGAATCGAGGGTCAGCAGGTCCAGCTTGTCCTCTTCCATGAACGGCAACAGGTACGCCAGCTGATTg         <  1:2819850/150‑1 (MQ=255)
                                                                              aGGCAATACAGAACCATCAGGCGAACAACTCCCCCTGAATCCGCTCCAGCAGCTTCTGGATCTCGCC‑CAGCCGCTGCTGTGGCGAATCGAGGGTCAGCAGGTCCAGCTTGTCCTCTTCCATGAACGGCAACAGGTACGCCAGCTGATTgg        >  2:3349717/1‑150 (MQ=255)
                                                                              aGGCAATACAGAACCATCAGGCGAACAACTCCCCCTGAATCCGCTCCAGCAGCTTCTGGATCTCGCC‑CAGCCGCTGCTGTGGCGAATCGAGGGTCAGCAGGTCCAGCTTGTCCTCTTCCATGAACGGCAACAGGTACGCCAGCTGATTgg        >  1:20800/1‑150 (MQ=255)
                                                                               ggCAATACAGAACCATCAGGCGAACAACTCCCCCTGAATCCGCTCCAGCAGCTTCTGGATCTCGCC‑CAGCCGCTGCTGTGGCGAATCGAGGGTCAGCAGGTCCAGCTTGTCCTCTTCCATGAACGGCAACAGGTACGCCAGCTGAt           >  1:1781336/1‑146 (MQ=255)
                                                                               ggCAATACAGAACCATCAGGCGAACAACTCCCCCTGAATCCGCTCCAGCAGCTTCTGGATCTCGCC‑CAGCCGCTGCTGTGGCGAATCGAGGGTCAGCAGGTCCAGCTTGTCCTCTTCCATGAACGGCAACAGGTACGCCAGCTGAt           <  2:1781336/146‑1 (MQ=255)
                                                                                gCAATACAGAACCATCAGGCGAACAACTCCCCCTGAATCCGCTCCAGCAGCTTCTGGATCTCGCC‑CAGCCGCTGCTGTGGCGAATCGAGGGTCAGCAGGTCCAGCtt                                                 >  1:3262280/1‑107 (MQ=255)
                                                                                gCAATACAGAACCATCAGGCGAACAACTCCCCCTGAATCCGCTCCAGCAGCTTCTGGATCTCGCC‑CAGCCGCTGCTGTGGCGAATCGAGGGTCAGCAGGTCCAGCTTGTCCTCTTCCATGAACGGCAACAGGTACGCCAGCTGATTGGcc      >  1:997250/1‑150 (MQ=255)
                                                                                gCAATACAGAACCATCAGGCGAACAACTCCCCCTGAATCCGCTCCAGCAGCTTCTGGATCTCGCC‑CAGCCGCTGCTGTGGCGAATCGAGGGTCAGCAGGTCCAGCTTGTCCTCTCCCATGAACGGCAACAGGTACGCCAGCTGATTGGcc      >  1:3147954/1‑150 (MQ=255)
                                                                                  aaTACAGAACCATCAGGCGAACAACTCCCCCTGAATCCGCTCCAGCAGCTTCTGGATCTCGCC‑CAGCCGCTGCTGTGGCGAATCGAGGGTCAGCAGGTCCAGCTTGTCCTCTTCCATGAACGGCAACAGGTACGCCAGCTGATTGGCCAg    >  2:291592/1‑150 (MQ=255)
                                                                                    tACAGAACCATCAGGCGAACAACTCCCCCTGAATCCGCTCCAGCAGCTTCTGGATCTCGCC‑CAGCCGCTGCTGTGGCGAATCGAGGGTCAGCAGGTCCAGCTTGTCCTCTTCCATGAACGGCAACAGGTACGCCAGCTGATTGGCCAgcg  >  2:767473/1‑150 (MQ=255)
                                                                                    tACAGAACCATCAGGCGAACAACTCCCCCTGAATCCGCTCCAGCAGCTTCTGGATCTCGCC‑CAGCCGCTGCTGTGGCGAATCGAGGGTCAGCAGGTCCAGCTTGTCCTCTGCCATGAACTGCAACAGGTACGCCAGCTGCTTGGCCAgag  >  2:1393193/1‑148 (MQ=255)
                                                                                    |                                                                                                                                                      
TATTCGCGGGTAAACCCGCTCCTACGCACGGGATCGCGCTTATCGTAGGAGCGGGTTTACCCGCGAATAGGCCGGCACAGGCAATACAGAACCATCAGGCGAACAACTCCCCCTGAATCCGCTCCAGCAGCTTCTGGATCTCGCC‑CAGCCGCTGCTGTGGCGAATCGAGGGTCAGCAGGTCCAGCTTGTCCTCTTCCATGAACGGCAACAGGTACGCCAGCTGATTGGCCAGCG  >  NC_002947/5477153‑5477386

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.