New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 6032840 | 72 (0.540) | 22 (0.220) | 19/194 | 6.1 | 33.1% | intergenic (+48/+88) | dppA‑IV/PP_5284 | dipeptide transport protein/hypothetical protein |
? | NC_002947 | = 6032856 | 35 (0.350) | intergenic (+64/+72) | dppA‑IV/PP_5284 | dipeptide transport protein/hypothetical protein | |||||
Rejected: Coverage evenness skew score above cutoff. |
CCTTGCTGCGCCAAGGCGTCGAGGGGTACCAGGTGAGCCCGTTCGGGCGGCTGGATTTCAGCAAGGTGACGGTGA‑CCAAGTAAGCCTGTACCGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGGGTAGCGCCAGCCTGGCAGTTGACGCTACCCCTGTAGGAGCGGGTTTACCCGCGAAAGGGCCCGTACTGACCCTATAAGGCTCTCAGTACTCCCTCAGACCACAATCCACCCATGCTCGACCATCGACAACGGCTCCCCATCACCAATGATGATGTGATCCAGCACCCGCAC > NC_002947/6032710‑6033005 | ccTTGCTGCGCCAAGGCTTCGATGGGTACCAGGTGAGCCCGTTCGGGCGGATGGATTTCAGCAAGGTGACGGTGA‑CCAAGTCACCCTGGACCTGCCTCTTCGCGGGTAAACCCGCTCCTACAGGGGTAGCGCCAGCCTGGCAGTTGACGc < 2:1650708/150‑1 (MQ=255) ttGCTGCGCCAAGGCGTCGAGGTGTACCAGGTGAGCCCGTTCGGGCGGCTGGATTTCAGCACGGT‑ACCCCGATCCAAGTAAGCCTGTACCGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGGGTAGCGCCAGCCTGGCAGTTGACGCTa < 1:1059924/150‑1 (MQ=38) tgctgcGCCAAGGCGTCGAGGGGTACCAGGTGAGCCCGTTCGGGCGGCTGGATTTCAGCAAGGTGACGGTGA‑CCAAGTAAGCCTGTACCGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGGGTAGCGCCAGCCTGGCAGTTGACGCTAc < 1:1946109/150‑1 (MQ=255) tgctgcGCCAAGGCGTCGAGGGGTACCAGGTGAGCCCGTTCGGGCGGCTGGATTTCAGCAAGGTGACGGTGA‑CCAAGTAAGCCTGTACCGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGGGTAGCGCCAGCCTGGCAATTGACGCTAc < 2:3087642/150‑1 (MQ=255) ctgcGCCAAGGCGTCGAGGGGTACCAGGTGAGCCCGTTCGGGCGGCTGGATTTCAGCAAGGTGACGGTGA‑CCAAGTAAGCCTGTACCGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGGGTAGCGCCAGCCTGGCAGTTGACGCTAccc < 2:3260574/150‑1 (MQ=255) gcgcCAAGGCGTCGAGGGGTACCAGGTGAGCCCGTTCGGGCGGCTGGATTTCAGCAAGGTGACGGTGA‑CCAAGTAAGCCTGTACCGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGGGTAGCGCCAGCCTGGCAGTTGACGCTACCCCt < 2:2499106/150‑1 (MQ=255) gcgcCAAGGCGTCGAGGGGTAACAGGTGAGCCCGTTCGGGCGGCTGGATTTCAGCAAGGTGACGGTGA‑CCAAGTAAGCCTGTACCGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGGGTAGCGCCAGCCTGGCAGTTGACGCTACCCCt < 2:275531/150‑1 (MQ=255) cgcCAAGGCGTCGAGGGGTACCAGGTGAGCCCGTTCGGGCGGCTGGATTTCAGCAAGGTGACGGTGA‑CCAAGTAAGCCTGTACCGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGGGTAGCGCCAGCCTGGCAGTTGACGCTACCCCTg < 2:709878/150‑1 (MQ=255) cgcCAAGGCGTCGAGGGGTACCAGGTGAGCCCGTTCGGGCGGCTGGATTTCAGCAAGGTGACGGTGA‑CCAAGTAAGCCTGTACCGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGGGTAGCGCCAGCCTGGCAGTTGACGCTACCCCTg < 2:709827/150‑1 (MQ=255) gcCAAGGCGTCGAGGGGTACCAGGTGAGCCCGTTCGGGCGGCTGGATTTCAGCAAGGTGACGGTGA‑CCAAGTAAGCCTGTACCGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGGGTAGCGCCAGCCTGGCAGTTGACGCTACCCCTGt < 1:691689/150‑1 (MQ=255) cAAGGCGTCGAGGGGTACCAGGTGCGCCCGTTCGGGCGGCTGGATTTCAGCAAGGTGACGGTGA‑CCAAGTAAGCCTGTACCGGCCTCTTCGCGGGTCAACCCGCTCCTACAGGGGTAGCGCCAGCCTGGCAGTTGACGCTACCCCTGTAg < 2:347715/150‑1 (MQ=255) cAAGGCGTCGAGGGGTACCAGGTGAGCCCGTTCGGGCGGCTGGATTTCAGCAAGGTGACGGTGA‑CCAAGTAAGCCTGTACCGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGGGTAGCGCCAGCCTGGCAGTTGACGCTACCCCTGTAg > 1:1075308/1‑150 (MQ=255) ggTCGAGGGGTACCAGGTGAGCCCGTTCGGGCGGCTGGATTTCAGCAAGGTGACGGTGA‑CCAAGTAAGCCTGTACCGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGGGTAGCGCCAGCCTGGCAGTTGACGCTACCCCTGTAGGAGCg < 2:2902925/149‑1 (MQ=255) tCGAGGGGTACCAGGTGAGCCCGTTCGGGCGGCTGGATTTCAGCAAGGTGACGGTGA‑CCAAGTAAGCCTGTACCGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGGGTAGCGCCAGCCTGGCAGTTGACGCTACCCCTGTAGGAGCggg < 2:1075308/150‑1 (MQ=255) gAGGGGTACCAGGTGAGCCCGTTCGGGCGGCTGGATTTCAGCAAGGTGACGGTGA‑CCAAGTAAGCCTGTACCGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGGGTAGCGCCAGCCTGGCAGTTGACGCTACCCCTGTAGGAGCgg > 2:826698/1‑147 (MQ=255) gAGGGGTACCAGGTGAGCCCGTTCGGGCGGCTGGATTTCAGCAAGGTGACGGTGA‑CCAAGTAAGCCTGTACCGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGGGTAGCGCCAGCCTGGCAGTTGACGCTACCCCTGTAGGAGCgg < 1:826698/147‑1 (MQ=255) ggcggcTGGATTTCAGCAAGGTGACGGTGA‑CCAAGTAAGCCTGTACCGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGGGTAGCGCCAGCCTGGCAGTTGACGCTAccc > 2:1080574/1‑110 (MQ=255) ggcggcTGGATTTCAGCAAGGTGACGGTGA‑CCAAGTAAGCCTGTACCGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGGGTAGCGCCAGCCTGGCAGTTGACGCTAccc < 1:1080574/110‑1 (MQ=255) cTGGATTTCAGCAAGGTGACGGTGA‑CCAAGTAAGCCTGTACCGGCCTCTTCGCGGGTACACCCGCTCCTACAGGGGTAGCGCCAGCCTGTCAGTTGACGCTACCCCTGTa < 1:1759620/110‑1 (MQ=255) cTGGATTTCAGCAAGGTGACGGTGA‑CCAAGTAAGCCTGTACCGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGGGTAGCGCCAGCCTGGCAGTTGACGCTACCCCTGTa > 2:1759620/1‑110 (MQ=255) cAAGGTGACGGTGA‑CCAAGTAAGCCTGTACCGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGGGTAGCGCCAGCCTGGCAGTTGACGCTAccc < 1:2034341/94‑1 (MQ=255) cAAGGTGACGGTGA‑CCAAGTAAGCCTGTACCGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGGGTAGCGCCAGCCTGGCAGTTGACGCTAccc > 2:2034341/1‑94 (MQ=255) tgacggtga‑cCAAGTAAGCCTGTACCGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGGGTAGCGCCAGCCTGGCAGTTGACGCTACCCCTGTAGGAGc > 2:2670375/1‑99 (MQ=255) tgacggtga‑cCAAGTAAGCCTGTACCGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGGGTAGCGCCAGCCTGGCAGTTGACGCTACCCCTGTAGGAGc < 1:2670375/99‑1 (MQ=255) aGTAAGCCTGTACCGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGGGTAGCGCCAGCCTGGCAGTTGACGCTACCCCTGTAGGAGCggg > 2:2661702/1‑90 (MQ=255) aGTAAGCCTGTACCGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGGGTAGCGCCAGCCTGGCAGTTGACGCTACCCCTGTAGGAGCggg < 1:2661702/90‑1 (MQ=255) gCCTCTTCGCGGGTAAACCCGCTCCTACAGGGGTAGCGCCAGCCTGGCAGTTGACGCTACCCCTGTAGGAGCgg > 2:3234581/1‑74 (MQ=255) gCCTCTTCGCGGGTAAACCCGCTCCTACAGGGGTAGCGCCAGCCTGGCAGTTGACGCTACCCCTGTAGGAGCgg < 2:2823749/74‑1 (MQ=255) gCCTCTTCGCGGGTAAACCCGCTCCTACAGGGGTAGCGCCAGCCTGGCAGTTGACGCTACCCCTGTAGGAGCgg < 1:3234581/74‑1 (MQ=255) gCCTCTTCGCGGGTAAACCCGCTCCTACAGGGGTAGCGCCAGCCTGGCAGTTGACGCTACCCCTGTAGGAGCgg > 1:2823749/1‑74 (MQ=255) tAAACCCGCTCCTACAGGGGTAGCGCCAGCCTGGCAGTTGACGCTACCCCTGTAGGAGCGGGTTTACCCGCGAAAgg < 2:2576391/77‑1 (MQ=255) tAAACCCGCTCCTACAGGGGTAGCGCCAGCCTGGCAGTTGACGCTACCCCTGTAGGAGCGGGTTTACCCGCGAAAgg > 1:2576391/1‑77 (MQ=255) aaaCCCGCTCCTACAGGGGTAGCGCCAGCCTGGCAGTTGACGCTACCCCTGTAGGAGCGGGTTTACCCGCGAAAGGGCCCGTACTGACCCTATAAGGCTCTCAGTACTCCCTCAGAc > 2:988530/1‑117 (MQ=255) aaaCCCGCTCCTACAGGGGTAGCGCCAGCCTGGCAGTTGACGCTACCCCTGTAGGAGCGGGTTTACCCGCGAAAGGGCCCGTACTGACCCTATAAGGCTCTCAGTACTCCCTCAGAc < 1:988530/117‑1 (MQ=255) cccGCTCCTACAGGGGTAGCGCCAGCCTGGCAGTTGACGCTACCCCTGTAGGGGCGGGTTTACCCGCGAAAGGGCCCGTACTGACCCTATAAGGCTCTCAGTACTCCCt > 2:1404799/1‑109 (MQ=255) cccGCTCCTACAGGGGTAGCGCCAGCCTGGCAGTTGACGCTACCCCTGTAGGGGCGGGTTTACCCGCGAAAGGGCCCGTACTGACCCTATAAGGCTCTCAGTACTCCCt < 1:1404799/109‑1 (MQ=255) cccGCTCCTACAGGGGTAGCGCCAGCCTGGCAGTTGACGCTACCCCTGTAGGAGCGGGTTTGCCCGCGAAAGGGCCCGTACTGACCCTATAAGGCTCTCAGTACTCCCTCAGACCACAATCCACCCATGCCCGACCATCGACAACGGccc > 2:413009/1‑148 (MQ=255) cccGCTCCTACAGGGGTAGCGCCAGCCTGGCAGTTGACGCTACCCCTGTAGGAGCGGGTTTACCCGCGAAAGGGCCCGTACTGACCCTATAAGGCTCTCAGTACTCCCTCAGACCACAATCCACCCATGCTCGACCATCGACAACGGCTc > 2:1539029/1‑150 (MQ=255) cccGCTCCTACAGGGGTAGCGCCAGCCTGGCAGTTGACGCTACCCCTGTAGGAGCGGGTTTACCCGCGAAAGGGCCCGTACTGACCCTATAAGGCTCTCAGTACTCCCTCAGACCACAATCCACCCATGCTCGACCATCGACAACGGCTc > 1:2024842/1‑150 (MQ=255) ccGCTCCTACAGGGGTAGCGCCAGCCTGGCAGTTGACGCTACCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGTAcagg > 1:2394765/1‑80 (MQ=17) ccGCTCCTACAGGGGTAGCGCCAGCCTGGCAGTTGACGCTACCCCTGTAGGAGCGGGTTTACCCGCGAAAGGGCCCGTACTGACCCTATaa < 2:1437847/91‑1 (MQ=255) ccGCTCCTACAGGGGTAGCGCCAGCCTGGCAGTTGACGCTACCCCTGTAGGAGCGGGTTTACCCGCGAAAGGGCCCGTACTGACCCTATaa > 1:1437847/1‑91 (MQ=255) tCCTACAGGGGTAGCGCCAGCCTGGCAGTTGACGCTACCCCTGTAGGAGCGGGTTTACCCGCGAAAGGGCCCGTACTGACCCTATAAGGCTCTCAGTACTCCCTCAGACCACAATCCAc < 1:2305967/119‑1 (MQ=255) tCCTACAGGGGTAGCGCCAGCCTGGCAGTTGACGCTACCCCTGTAGGAGCGGGTTTACCCGCGAAAGGGCCCGTACTGACCCTATAAGGCTCTCAGTACTCCCTCAGACCACAATCCAc > 2:2305967/1‑119 (MQ=255) cTACAGGGGTAGCGCCAGCCTGGCAGTTGACGCTACCCCTGTAGGCCCGCGTTTACCCGCGAAAGGGCCCGTACTGACCCTATAAGGCTCTCAGTACTCCCTCAGACCACAATCCACCCATGCTCGACCATCGACAACGGCTCCCCATCa > 1:3160059/1‑150 (MQ=255) cTACAGGGGTAGCGCCAGCCTGGCAGTTGACGCTACCCCTGTAGGAGCGGGTTTACCCGCGAAAGGGCCCGTACTGACCCtata < 2:936687/84‑1 (MQ=255) cTACAGGGGTAGCGCCAGCCTGGCAGTTGACGCTACCCCTGTAGGAGCGGGTTTACCCGCGAAAGGGCCCGTACTGACCCtata > 1:936687/1‑84 (MQ=255) tACAGGGGTAGCGCCAGCCTGGCAGTTGACGCTACCCCTGTAGGAGCGGGTTTACCCGCGAAAGGGCCCGTACTGACCCTATAAGGCTCTCAGTAc > 1:541547/1‑96 (MQ=255) tACAGGGGTAGCGCCAGCCTGGCAGTTGACGCTACCCCTGTAGGAGCGGGTTTACCCGCGAAAGGGCCCGTACTGACCCTATAAGGCTCTCAGTAc < 2:541547/96‑1 (MQ=255) tACAGGGGTAGCGCCAGCCTGGCAGTTGACGCTACCCCTGTAGGAGCGGGTTTACCCGCGAAAGGGCCCGTACTGACCCTATAAGGCTCTCAGTACTCCCTCAGACCACAATCCACCCATGCTCGACCATCGACAACGGCTCCCCATCAc > 1:3393870/1‑150 (MQ=255) tACAGGGGTAGCGCCAGCCTGGCAGTTGACGCTACCCCTGTAGGAGCGGGTTTACCCGCGAAAGGGCCCGTACTGACCCTATAAGGCTCTCAGTACTCCCTCAGACCACAATCCACCCATGCTCGACCATCGACAACGGCTCCCCATCAc > 2:319397/1‑150 (MQ=255) tACAGGGGTAGCGCCAGCCTGGCAGTTGACGCTACCCCTGTAGGAGCGGGTTTACCCGCGAAAGGGCCCGTACTGACCCTATAAGGCTCTCAGTACTCCCTCAGACCACAATCCACCCATGCTCGACCATCGACAACGGCTCCCCATCAc < 2:3393870/150‑1 (MQ=255) gTAGCGCCAGCCTGGCAGTTGACGCTACCCCTGTAGGAGCTTGTTTACCCGCGAAAGGGCCCGTa < 2:1721650/65‑1 (MQ=255) gTAGCGCCAGCCTGGCAGTTGACGCTACCCCTGTAGGAGCGGGTTTACCCGCGAAAGGGCCCGTa > 1:1721650/1‑65 (MQ=255) gTAGCGCCAGCCTGGCAGTTGACGCTACCCCTGTAGGAGCGGGTTTACCCGCGAAAGGGCCCGTACTGACCCTATAAGGCTCTCAGTACTCCCTCAGACCACAATCCACCCATGCTCGACCATCGACAACGGCTCCCCATCACCAatgat > 2:1797140/1‑150 (MQ=255) tAGCGCCAGCCTGGCAGTTGACGCTACCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGt > 1:2731537/1‑63 (MQ=17) tAGCGCCAGCCTGGCAGTTGACGCTACCCCTGTAGGAGCGGGTTTACCCGCGAAAGGGCCCGTACTGACCCTATAAGGCTCTCAGTACTCCCTCAGACCACAATCCACCCATGCTCGACCATCGACAACGGCT‑CACATCACCAatgatga > 1:1816947/1‑150 (MQ=255) gcgcCAGCCTGGCAGTTGACGCTACCCCTGTAGGAGCGGGTTTACCCGCGAAAGGGCCCGTACTGACCCTATAAGGCTCTCAGTACTCCCTCAGACCACAATCCACCCATGCTCGACCATCGACAACGGCTCCCCATCACCAatgatgat < 1:319397/150‑1 (MQ=255) gcCAGCCTGGCAGTTGACGCTACCCCTGTAGGAGCGGGTTTACCCGCGAAAGGGCCCGTACTGACCCTATAAGGCTCTCAGTACTCCCTCAGACCACAATCCACCCATGCTCGACCATCGACAACGGCTCCCCATCAc > 2:3318373/1‑138 (MQ=255) gcCAGCCTGGCAGTTGACGCTACCCCTGTAGGAGCGGGTTTACCCGCGAAAGGGCCCGTACTGACCCTATAAGGCTCTCAGTACTCCCTCAGACCACAATCCACCCATGCTCGACCATCGACAACGGCTCCCCATCAc < 1:3318373/138‑1 (MQ=255) ccAGCCTGGCAGTTGACGCTACCCCTGTAGGAGCGGGTTTACCCGCGAAAGGGCCCGTACTGACCCTATAAGGCTCTCAGTACTCCCTCAGACCACAATCCACCCATGCTCGAcc > 2:1936523/1‑115 (MQ=255) ccAGCCTGGCAGTTGACGCTACCCCTGTAGGAGCGGGTTTACCCGCGAAAGGGCCCGTACTGACCCTATAAGGCTCTCAGTACTCCCTCAGACCACAATCCACCCATGCTCGAcc < 1:1936523/115‑1 (MQ=255) cTGGCAGTTGACGCTACCCCTGTAGGAGCGGGTTTACCCGCGAAAGGGCCCGTACTGACCCTATAAGGCTCTCAGTACTCCCTCAGACCACAATTCACCCATGCTCGACCATCGACAACGGCTCCCCATCACCAATGATGATGTGATCCa > 2:795485/1‑150 (MQ=255) tGGCAGTTGACGCTACCCCTGTAGGAGCGGGTTTACCCGCGAAAGGGCCCGTACTGACCCTATAAGGCTCTCAGTACTCCCTCAGACCACAATCCACCCATGCTCGACCATCGACAACGGCTCCCCATCACCAATGATGATGTGATCCAg > 1:1054259/1‑150 (MQ=255) gTTGACGCTACCCCTGTAGGAGCGGGTTTACCCGCGAAAGGGCCCGTACTGACCCTATAAGGCTCTCAGTACTCCCTCAGACCACAATCCACCCATGCTCGACCATCGACAACGGCTCCCCATCACCAATGATGATGTGATCCAGCAccc > 1:790978/1‑150 (MQ=255) gACGCTACCCCTGTAGGAGCGGGTTTACCCGCGAAAGGGCCCGTACTGACCCTATAAGGCTCTCAGTACTCCCTCAGACCACAATCCACCCATGCTCGACCATCGACAACGGCTCCCCATCACCAATGATGATGTGATCCAGCACCCGca < 1:1539029/150‑1 (MQ=255) aCGCTACCCCTGTAGGAGCGGGTTTACCCGCGAAAGGGCCCGTACTGACCCTATAAGGCTCTCAGTACTCCCTCAGACCACAATCCACCCATGCTCGACCATCGACAACGGCTCCCCATCACCAATGATGATGTGATCCAGCACCCGcac > 1:1204642/1‑150 (MQ=255) | CCTTGCTGCGCCAAGGCGTCGAGGGGTACCAGGTGAGCCCGTTCGGGCGGCTGGATTTCAGCAAGGTGACGGTGA‑CCAAGTAAGCCTGTACCGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGGGTAGCGCCAGCCTGGCAGTTGACGCTACCCCTGTAGGAGCGGGTTTACCCGCGAAAGGGCCCGTACTGACCCTATAAGGCTCTCAGTACTCCCTCAGACCACAATCCACCCATGCTCGACCATCGACAACGGCTCCCCATCACCAATGATGATGTGATCCAGCACCCGCAC > NC_002947/6032710‑6033005 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |