New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	4647603 =	50 (0.730)	9 (0.190)	9/188	4.5	25.6%	intergenic (+10/+121)	fusB/PP_4112	elongation factor G 2/sulfate transporter
	?	NC_002947	4647711 =	17 (0.350)					intergenic (+118/+13)	fusB/PP_4112	elongation factor G 2/sulfate transporter
Rejected: Coverage evenness skew score above cutoff.

AAGAGCCGCGGGGAGTAAGCGGTTCTCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGATGGCCGCAGGCCCAAACATTGTGCGCCCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGACCGCAACAGTTTTCAATGCTGCTCGCCCGCCCGCTTCAACAGCTTCTTGCACCGCTCCGACAAATGCACCACGCGCAAATGCTTGCCCGCCTTGGCATAGCGCTCGCGCAGGGTTTTCAGCGCCGCAACGGCCGAATAATCGACAAAG  >  NC_002947/4647576‑4647859                                                                                                                                        |                                                                                                                                                     aagaGCCGCGGGCCGTAAGCGGTTCTCCTGTGCCGGCCTCTTCGAGGGTAACCCCGCTCGTACCGGATGGCCGCAGGCCCAAACATTGTGCGCCCCCCTGTAGGAGCGGGTTTAGCCGCGAAGAGGCCGGCACAGACCGCAACAGTTTTc                                                                                                                                        <  1:513189/150‑1 (MQ=38)                                       tctTCGCGGGTAAACCCGCTCCTACAGGATGGCCGCAGGCCCAAACATTGTGCGCCCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGACCGCAACAGTTTTCAATGCTGCTCGCCCGCCCGCTTCAACAGCTTCTTGCAc                                                                                                  >  2:332543/1‑150 (MQ=255)                                            gcgGGTAAACCCGCTCCTACAGGATGGCCGCAGGCCCAAACATTGTGCGCCCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGACCGCAACAGTTTTCAATGCTGCTCGCCCGCCCGCTTCAACAGCTTCTTGCACCGCTc                                                                                             >  2:167770/1‑150 (MQ=255)                                                gTAAACCCGCTCCTACAGGATGGCCGCAGGCCCAAACATTGTGCGCCCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGACCGCAACAGttt                                                                                                                                          <  1:1552682/101‑1 (MQ=255)                                                gTAAACCCGCTCCTACAGGATGGCCGCAGGCCCAAACATTGTGCGCCCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGACCGCAACAGttt                                                                                                                                          >  2:1552682/1‑101 (MQ=255)                                                      ccGCTCCTACAGGATGGCCGCAGGCCCAAACATTGTGCGCCCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGACCGCAACAGTTTTCAATGCTGCGCGCCCGCCCGCTTCAACAGCTTCTTGCACCGCTCCGACAAATGc                                                                                   >  1:1461299/1‑150 (MQ=255)                                                             tACAGGATGGCCGCAGGCCCAAACATTGTGCGCCCCCCTGTAGGAGCGGATTTACCCTCGAAGAGTCCGGCACAGAACGCAACAGTTTTCAATGCTGCTCGCCCGCCCGCTTCAACAGCTTCTTGCACCGCTCCGACAAATGCACCAcgc                                                                            >  1:1658108/1‑150 (MQ=255)                                                                  gATGGCCGCAGGCCCAAACATTGTGCGCCCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGACCGCAACAGTTTTCAATGCTGCTCGCCCGCCCGCTTCAACAGCTTCTTGCACCGCTCCGACAAATGCACCACGCGCaaa                                                                       <  2:680803/150‑1 (MQ=255)                                                                  gATGGCCGCAGGCCCAAACATTGTGCGCCCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGACCGCAACAGTTTTCAATGCTGCTCGCCCGCCCGCTTCAACAGCTTCTTGCACCGCTCCGACAAATGCACCACGCGCaaa                                                                       >  1:680803/1‑150 (MQ=255)                                                                               ccAAACATTGTGCGCCCCCCTGTAGAAGCGGGTTTACCCGCGAAGAGGCCGGCACAGACCGCAACAGTTTTCAATGCTGCTCGCCCGCCCGCTTCAACAGCTTCTTGCACCGCTCCGACAAATGCACCACGCGCAAATGCTTGCCCGCCt                                                          >  1:444676/1‑150 (MQ=255)                                                                                 aaaCATTGTGCGCCCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGACCGCAACAGTTTTCAATGCTGCTCGCCCGCCCGCTTCAACAGc                                                                                                           <  2:471517/99‑1 (MQ=255)                                                                                 aaaCATTGTGCGCCCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGACCGCAACAGTTTTCAATGCTGCTCGCCCGCCCGCTTCAACAGc                                                                                                           >  1:471517/1‑99 (MQ=255)                                                                                 aaaCATTGTGCGCCCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGACCGCAACAGTTTTCAATGCTGCTCGCCCGCCCGCTTCAACAGCTTCTTGCACCGCTCCGACAAATGCACCACGCGCAAATGCTTGCCCGCCTTg                                                        >  1:203291/1‑150 (MQ=255)                                                                                  aaCATTGTGCGCCCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGACCGCAACAGTTTTCAATGCTGCTCGCCCGCCCGCTTCAACAGCTTCTTGCACCGCTCCGACAAATGCACCACGCGCAAATGCTTGCCCGACTTgg                                                       >  1:598797/1‑150 (MQ=255)                                                                                   aCATTGTGCGCCCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGACCGCAACAGTTTTCAATGCTGCTCGCCCGCCCGCTTCAACAGCTTCTTGCACCGCTCCGACAAATGCACCACGCGCAAATGCTTGCCCGCCTTGGc                                                      >  2:642154/1‑150 (MQ=255)                                                                                      ttGTGCGCCCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGACCGCAACAGTTTTCAATGCTGCTCGCCCGCCCGCTTCAACAGCTTCTTGCACCGCTCCGACAAATGCACCACGCGCAAATGCTTGCCCGCCTTGGCATa                                                   >  1:841991/1‑150 (MQ=255)                                                                                                cccTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGACCGCAACAGTTTTCAATGCTGCTCGCCCGCCCGCTTCAACAGCTTCTTGCACCGCTCCGACAAATGCACCACGCGCAAATGCTTGCCCGCCTTGGCATAGCGCTCgcgc                                         >  1:219751/1‑150 (MQ=255)                                                                                                 ccTGTAGGAGCGGGTCTCCCAGCGCAACGCCCTTCACATACCCGAAGATTTTTCAATGCTGCTCGCCCGCCCGCTTCAACAGCTTCTTGCACCGCTCCGACAAATGCACCACGCGCAAATGCTTGCCCGCCTTGGCATAGCGCTCGCGCa                                        <  2:1461299/150‑1 (MQ=255)                                                                                                   tGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGACCGCAACAGTTTTCAATGCTGCTCGCCCGCCCGCTTCAACAGCTTCTTGCACCGCTCCGACAAATGCACCACGCGCAAATGCTTGCCCGCCGTGGCATAGCGCTCGCGCAgg                                      <  1:1626738/150‑1 (MQ=255)                                                                                                   ggTAGGGGCGGGTTGACCCGCGAAGAGGCCGGCACAGACCGCAACAGTTTTCAATGCTGCTCGCCCGCCCGTGTCAACAGCTTCTTGCACCGCTCCGACAAATGCACCACGCGCAAATGCTTGCCCGCCTTGGCATAGCGCTCGCGCAgg                                      <  1:541982/149‑1 (MQ=255)                                                                                                        gAGCGGGTTTACCCGCGAAGAGGCCGGCACAGACCGCAAGAGTTTTCAATGCTGCTCGCCCGCCCGCTTCAACAGCTTCTTGCACCGCTCCGACAAATGCACCACGCGCAAATGCTTGCCCGACTCGGCCTAGGTCGCGCGCggggcgtt                                 >  2:97400/1‑146 (MQ=255)                                                                                                        gAGCGGGTTTACCCGCGAAGAGGCCGGCACAGACCGCAACAGTTTTCAATGCTGCTCGCCCGCCCGCTTCAACAGCTTCTTGCACCGCTCCGACAAATACACCACGCGCAAATGCTTGCCCGCCTTGGCATAGCGCTCGCGCAGGGtttt                                 >  2:1228632/1‑150 (MQ=255)                                                                                                           cGGGTTTACCCGCGAAGAGGCCGGCACAGACCGCAACAGTTTTCAATGCTGCTCGCCCGCCCGCTTCAACAGCTTCTTGCACCGCTCCGACAAATGCACCACGCGCAAATGCTTGCCCGCCTTGGCATAGCGCTCGCGCAGGGTTTTCAg                              <  1:332543/150‑1 (MQ=255)                                                                                                             ggTTTACCCGAGAAGAGGCCGGCACAGACCGCAACAGTTTTCAATGCTGCTCGCTCGCCCGCTTCAACAGCTTCTTGCACCGCTCTGACAAATGCACCACGCGCAACTGCTTGCCCGCCTTGGCATAGCGCTCGCTCGGGGTTTTCAgcg                            >  2:246922/1‑150 (MQ=255)                                                                                                              gTTTACCCGCGAAGAGGCCGGCACAGACCGCAACAGTTTTCAATGCTGCTCGCCCGCCCGCTTCAACAGCTTCTTGCACCGCTCCGACAAATGCACCACGCGCAAATGCTTGCCCGCCTTGGCATAGCGCTCGCGCAGGGTTTTCAgcgc                           >  1:156463/1‑150 (MQ=255)                                                                                                                      gcgAAGAGGCCGGCACAGACCGCAACAGTTTTCAATGCTGCTCGCCCGCCCGCTTCAACAGCGTCTTGCACCGCTCCGACAAATGCACCACGCGCAAATGCTTGCCCGCCTTGGCATAGCGCTCGCGCAGTGCTTTCAGCGCCGCAACgg                   >  1:938524/1‑150 (MQ=255)                                                                                                                            agGCCGGCACAGACCGCAACAGTTTTCAATGCTGCTCGCCCGCCCGCTTCAACAGCTTCTTGCACCGCTCCGACAAATGCACCACGCGCAAATGCTTGCCCGCCTTGGCATAGCGCTCGCGCAGGGTTTTCAGCGCCGCAACGGCCGaat             <  1:167770/150‑1 (MQ=255)                                                                                                                              gCCGGCACAGACCGCAACAGTTTTCAATGCTGCTCGCCCGCCCGCTTCAACAGCTTCTTGCACCGCTCCGACAAATGCACCACGCGCAAATGCTTGCCCGCCTTGGCATAGCGCTCGCGCAGGGTTTTCAGCGCCGCAACGGCCGaataa           >  2:398736/1‑150 (MQ=255)                                                                                                                                cGGCACAGACCGCAACAGTTTTCAATGCTGCTCGCCCGCCCTCGCCAACAGCTTGTTGCGCCGATTCGGCGCCGCCACCACCGGAAAATGCTCGCACGTCTTGTGCTGGCACTCCCGCGGGCTTTTCGCCGCGGCACCGGCCGagtcgtc         >  2:512026/1‑144 (MQ=255)                                                                                                                                      aGACCGCAACAGTTTTCAATGCTGCTCGCCCGCCCGCTTCAACAGCTTCTTGCACCGCTCCGACAAATGCACCACGCGCAAATGCTTGCCCGCCTTGGCATAGCGCTCGCGCAGGGTTTTCAGCGCCGCAACGGCCGAATAATCGACaaa   >  2:137880/1‑150 (MQ=255)                                                                                                                                       gACCGCAACAGTTTTCAATGCTGCTCGCCCGCCCGCTTCAACAGCTTCTTGCACCGCTCCGACAAATGCACCACGCGCAAATGCTTGCCCGCCTTGGCATAGCGCTCGCGCAGGGTTTTCAGCGCCGCAACGGCCGAATAATCGACAAAg  <  2:841991/150‑1 (MQ=255)                                                                                                                                        aCCGCAACAGTTTTCAATGCTGCTCGCCCGCCCGCTTCAACAGcttc                                                                                                        <  2:1557742/47‑1 (MQ=255)                                                                                                                                        aCCGCAACAGTTTTCAATGCTGCTCGCCCGCCCGCTTCAACAGcttc                                                                                                        >  1:1557742/1‑47 (MQ=255)                                                                                                                                        |                                                                                                                                                     AAGAGCCGCGGGGAGTAAGCGGTTCTCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGATGGCCGCAGGCCCAAACATTGTGCGCCCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGACCGCAACAGTTTTCAATGCTGCTCGCCCGCCCGCTTCAACAGCTTCTTGCACCGCTCCGACAAATGCACCACGCGCAAATGCTTGCCCGCCTTGGCATAGCGCTCGCGCAGGGTTTTCAGCGCCGCAACGGCCGAATAATCGACAAAG  >  NC_002947/4647576‑4647859

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.