New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 5506637	87 (1.380)	14 (0.280)	12/206	3.4	19.1%	intergenic (+48/‑151)	PP_4839/cycA	iron‑regulated membrane protein/D‑alanine/beta‑alanine/D‑serine/glycine permease
	?	NC_002947	= 5506650	51 (1.040)					intergenic (+61/‑138)	PP_4839/cycA	iron‑regulated membrane protein/D‑alanine/beta‑alanine/D‑serine/glycine permease
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

GCTGGGGGTGATGTTCCCGCTGGTGGGGGTGTCGATGGTGGTGATGTGGGGGGTGGATAGTTTGGTGGTGAGGCGCCGCCGGGTCTTGGCCAGCGCTTG‑AGCCTTGTGTT‑GCCTGTGCTGGCCTCTTCGCGGGTAAACCCGCTCCTACGAGGGACCGCGTTGTAGGAGCG‑GGTTTACCCGCGAAGAGGCCGGTACAGGCGAAATGCTGAGCCGAAAATGCAGAGTCGATCTGTCGCGCCCCGATCTGGAACGCGCGTGTTAGCCTAGCCGGCTACCTCTGACAAGAAGACTGCAGCC  >  NC_002947/5506490‑5506786                                                                                                                                                      |                                                                                                                                                       gctggGGGCCATCTTCCCGCTGGTGGGGGTGTCGATGGTGGTGATGTGGGGGGTGGATAGTTTGGGGTTGAGGCGCCGAAGGGTCTTGGCAAGCGCTTG‑AGCCTTTTGTT‑GCCTGTGCTGGCCTCTTCGCGGGTAAACCCGCTCCTACGa                                                                                                                                                      <  1:507448/150‑1 (MQ=38)  ctggGGGTGATGTTCCCGCTGGTGGGGGTGTCGTTGGATGAGAGGTTGGGGGTGGTTGGTCTGGTGGTGGGGCGCCGGAAGATC‑GGAAGAGCCCCTGTATCCTTGTGTT‑GCCTGTGCTGGCCTCTTCGCGGGTGAACCCTCTCCTACGAg                                                                                                                                                     >  1:1534367/1‑150 (MQ=12)  ctggGGGTGATGTTCCCGCTGGTGGGGGTGTCGATGGTGGTGATGTGGGGGGTGGATAGTTTGGTGGTGAGGCGCCGCCGGGTCTTGGCCAGCGCTTG‑AGCCTTGTGTT‑GCCTGTGCTGGCCTCTTCGCGGGTAAACCCGCTCCTACGAg                                                                                                                                                     <  2:1534367/150‑1 (MQ=255)           aTGTTCCCGCTGGTGGGGGTGTCGATGGTGGTGATGTGGGGGGTGGATAGTTTGGTGGTGAGGCGCCGCCGGGTCTTGGCCAGCGCTTG‑AGCCTTGTGTT‑GCCTGTGCTGGCCTCTTCGCGGGTAAACCCGCTCCTACGAGGGACCGCGt                                                                                                                                            <  2:1492299/150‑1 (MQ=255)            tGTTCCCGCTGGTGGGGGTGTCGATGGTGGTGATGTGGGGGGTGGATAGTTTGGTGGTGAGGCGCCGCCGGGTCTTGGCCAGCGCTTG‑AGCCTTGTGTT‑GCCTGTGCTGGCCTCTTCGCGGGTAAACCCGCTCCTACGAGGGACCGCGtt                                                                                                                                           <  1:831978/150‑1 (MQ=255)            tGTTCCCGCTGGTGGGGGTGTCGATGGTGGTGATGTGGGGGGTGGATAGTTTGGTGGTGAGGCGCCGCCGGGTCTTGGCCAGCGCTTG‑AGCCTTGTGTT‑GCCTGTGCTGGCCTCTTCGCGGGTAAACCCGCTCCTACGAGGGACCGCGtt                                                                                                                                           <  1:954880/150‑1 (MQ=255)              ttCCCGCTGGTGGGGGTGTCGATGGTGGTGATGTGGGGGGTGGTGAGGTTGGTGGTGAGGCGCCGCCGGGGCTTGGCCAGAGCTTG‑AGCCTTGTGTT‑GCCTGTGCTGGCCTCTTCGCGGGTAAACCCGCTCCTACGAGGAGCCGCGTTgg                                                                                                                                         >  1:893632/1‑149 (MQ=38)              ttCCCGCTGGTGGGGGTGTCGATGGTGGTGATGTGGGGGGTGGATAGTTTGGTGGTGAGGCGCCGCCGGGTCTTGGCCAGCGCTTG‑AGCCTTGTGTT‑GCCTGTGCTGGCCTCTTCGCGGGTAAACCCGCTCCTACGAGGGACCGCGTTGt                                                                                                                                         <  2:686472/150‑1 (MQ=255)              ttCCCGCTGGTGGGGGTGTCGATGGTGGTGATGTGGGGGGTGGATAGTTTGGTGGTGAGGCGCCGCCGGGTCTTGGCCAGCGCTTG‑AGCCTTGTGTT‑GCCTGTGCTGGCCTCTTCGCGGGTAAACCCGCTCCTACGAGGGACCGCGTTGt                                                                                                                                         <  1:895538/150‑1 (MQ=255)               tCCCGCTGGTGGGGGTGTCGATGGTGGTGATGTGGGGGGTGGATAGTTTGGTGGTGAGGCGCCGCCGAGTCTTGGCCAGCGCTTG‑AGCCTTGTGTT‑GCCTGTGCTGGCCTCTTCGCGGGTAAACCCGCTCCTACGAGGGACCGCGTTGTa                                                                                                                                        <  2:1433659/150‑1 (MQ=255)                 ccGCTGGTGGGGGTGTCGATGGTGGTGGTGTGGGGGGTGGATAGTTTGGTGGTGAGGCGCCGCCGGGTCTTGGCCAGCGCTTG‑AGCCTTGTGTT‑GCCTGTGCTGGCCTCTTCGCGGGTAAACCCGCTCCTACGAGGGACCGCGTTGTAgg                                                                                                                                      <  2:350604/150‑1 (MQ=255)                 ccGCTGGTGGGGGTGTCGATGGTGGTGATGTGGGGGGTGGATAGTTTGGTGGTGAGGCGCCGCCGGGTCTTGGCCAGCGCTTG‑AGCCTTGTGTT‑GCCTGTGCTGGCCTCTTCGCGGGTAAACCCGCTCCTACGAGGGACCGCGTTGTAgg                                                                                                                                      >  2:1319952/1‑150 (MQ=255)                 ccGCTGGTGGGGGTGTCGATGGTGGTGATGTGGGGGGTGGATAGTTTGGTGGTGAGGCGCCGCCGGGTCTTGGCCAGCGCTTG‑AGCCTTGTGTT‑GCCTGTGCTGGCCTCTTCGCGGGTAAACCCGCTCCTACGAGGGACCGCGTTGTAg                                                                                                                                       >  1:647194/1‑149 (MQ=255)                 ccGCTGGTGGGGGTGTCGATGGTGGTGATGTGGGGGGTGGATAGTTTGGTGGTGAGGCGCCGCCGGGTCTTGGCCAGCGCTTG‑AGCCTTGTGTT‑GCCTGTGCTGGCCTCTTCGCGGGTAAACCCGCTCCTACGAGGGACCGCGTTGTAg                                                                                                                                       <  2:647194/149‑1 (MQ=255)                      ggtggGGGTGTCGATGGTGGTGATGTGGGGGGTGGATAGTTTGGTGGTGAGGCGCCGCCGGGTCTTGGCCAGCGCTTG‑AGCCTTGTGTT‑GCCTGTGCTGGCCTCTTCGCGGGTAAACCCGCTCCTACGAGGGACCGCGTTGTAGGAGCg‑g                                                                                                                                <  2:1087406/150‑1 (MQ=255)                           gggTGTCGATGGTGGTGATGTGGGGGGTGGATAGTTTGGTGGTGAGGCGCCGCCGGGTCTTGGCCAGCGCTTG‑AGCCTTGTGTT‑GCCTGTGCTGGCCTCTTCGCGGGTAAACCCGCTCCTACGAGGGACCGCGTTGTAGGAGCG‑GGTTTa                                                                                                                           <  2:106617/150‑1 (MQ=255)                                tCGATGGTGGTGATGTGGGGGGTGGATAGTTTGGTGGTGAGGCGCTGCCGGGTCTTGGCCAGCGCTTG‑AGCCTTGTGTT‑GCCTGTGCTGGCCTCTTCGCGGGTAAACCCGCTCCTAc                                                                                                                                                        >  1:896317/1‑117 (MQ=255)                                tCGATGGTGGTGATGTGGGGGGTGGATAGTTTGGTGGTGAGGCGCTGCCGGGTCTTGGCCAGCGCTTG‑AGCCTTGTGTT‑GCCTGTGCTGGCCTCTTCGCGGGTAAACCCGCTCCTAc                                                                                                                                                        <  2:896317/117‑1 (MQ=255)                                  gATGGTGGTGATGTGGGGGTTGGATAGTTTGGTGGTGAGGCGCCGCCGGGTCTTGGCCAGCGCTTG‑AGCCTTGTGTT‑GCCTGTGCTGGCCTCTTCGCGGGTAAACCCGCTCCTACGAGGGACCGCGTTGt                                                                                                                                         <  1:1551210/130‑1 (MQ=255)                                  gATGGTGGTGATGTGGGGGTTGGATAGTTTGGTGGTGAGGCGCCGCCGGGTCTTGGCCAGCGCTTG‑AGCCTTGTGTT‑GCCTGTGCTGGCCTCTTCGCGGGTAAACCCGCTCCTACGAGGGACCGCGTTGt                                                                                                                                         >  2:1551210/1‑130 (MQ=255)                                  gATGGTGGTGATGTGGGGGGTGGATAGTTTGGTGGTGAGGCGCCGCCGGGTCTTGGCCAGCGCTTG‑AGCCTTGTGTT‑GCCTGTGCTGGCCTCTTCGCGGGTAAACCCGCTCCTACGAGGGACCGCGTTGTAGGAGCG‑GGTTTACCCGCGa                                                                                                                    >  2:427654/1‑150 (MQ=255)                                  gATGGTGGTGATGTGGGGGGTGGATAGTTTGGTGGTGAGGCGCCGCCGGGTCTTGGCCAGCGCTTG‑AGCCTTGTGCA‑GGTGATCCTGGCCTCTTCGCGGGTAAACCCGATGCTCAGCGGGACCGCGTGGTAGCTTCG‑TGTTTACCCGCGa                                                                                                                    >  1:1054539/1‑150 (MQ=255)                                   aTGGTGGTGATGTGGGGGGTGGATAGTTTGGTGGTGAGGCGCCGCCGGGTCTTGGCCAGCGCTTG‑AGCCTTGTGTT‑GCCTGTGCTGGCCTCTTCGCGGGTAAACCCGCTCCTACGAGGGACCGCGTTGTAGGAGCG‑GGTTTACCCGCGaa                                                                                                                   <  1:914163/150‑1 (MQ=255)                                   aTGGTGGTGATGTGGGGGGTGGATAGTTTGGTGGTGAGGCGCCGCCGGGTCTTGGCCAGCGCTTG‑AGCCTTGTGTT‑GCCTGTGCTGGCCTCTTCGCGGGTAAACCCGCTCCTACGAGGGACCGCGTTGTAGGAGCG‑GGTTTACCCGCGaa                                                                                                                   >  1:643829/1‑150 (MQ=255)                                     ggtggtGATGTGGGGGGTGGATAGTTTGGTGGTGAGGCGCCGCCGGGTCTTGGCCAGCGCTTG‑AGCCTTGTGTT‑GCCTGTGCTGGCCTCTTCGCGGGTAAACCCGCTCCTACGAGGGACCGCGTTGTAGGAGCG‑GGTTTACCCGCGAaga                                                                                                                 <  2:893632/150‑1 (MQ=255)                                       tggtgATGTGGGGGGTGGATAGTTTGGTGGTGAGGCGCCGCCGGGTCTTGGCCAGCGCTTG‑AGCCCTATCTCATCCTGT‑TTTTCCTCTTCGCGGGTAAACCCGCTCCTACGAGCGACCGCGTTGTAGGAGCG‑GGTTTACCCGCGAAGAgg                                                                                                               >  2:53945/1‑150 (MQ=37)                                                    ggTGGATAGTTTGGTGGTGAGGCGCCGCCGGGTCTTGGCCAGCGCTTG‑AGCCTTGTGTT‑GCCTGTGCTGGCCTCTTCGCGGGTAAACCCGCTCCTACGAGGGACCGCGTTGTAGGAGCG‑GGTTTACCCGCGAAGAGGCCGGTACAGGCGa                                                                                                  >  1:1358558/1‑150 (MQ=255)                                                      tGGATAGTTTGGTGGTGAGGCGCCGCCGGGTCTTGGCCAGCGCTTG‑AGCCTTGTGTT‑GCCTGTGCTGGCCTCTTCGCGGGTAAACCCGCTCCTACGAGGGACCGCGTTGTa                                                                                                                                        >  2:1356034/1‑111 (MQ=255)                                                      tGGATAGTTTGGTGGTGAGGCGCCGCCGGGTCTTGGCCAGCGCTTG‑AGCCTTGTGTT‑GCCTGTGCTGGCCTCTTCGCGGGTAAACCCGCTCCTACGAGGGACCGCGTTGTa                                                                                                                                        <  1:1356034/111‑1 (MQ=255)                                                        gATAGTTTGGTGGTGAGGCGCCGCCGGGTCTTGGCCAGCGCTTG‑AGCCTTGTGTT‑GCCTGTGCTGGCCTCTTCGCGGGTAAACCCGCTCCTACGAGGGACCGCGTTGTAGGa                                                                                                                                     <  2:957645/112‑1 (MQ=255)                                                        gATAGTTTGGTGGTGAGGCGCCGCCGGGTCTTGGCCAGCGCTTG‑AGCCTTGTGTT‑GCCTGTGCTGGCCTCTTCGCGGGTAAACCCGCTCCTACGAGGGACCGCGTTGTAGGa                                                                                                                                     >  1:957645/1‑112 (MQ=255)                                                         aTAGTTTGGTGGTGAGGCGCCGCCGGGTCTTGGCCAGCGCTTG‑AGCCTTGTGTT‑GCCTGTGCTGGCCTCTTCGCGGGTAAACCCGCTCCTACGAGGGACCGCGTTGTAGGAGCG‑GGTTTAcc                                                                                                                         <  2:463357/122‑1 (MQ=255)                                                         aTAGTTTGGTGGTGAGGCGCCGCCGGGTCTTGGCCAGCGCTTG‑AGCCTTGTGTT‑GCCTGTGCTGGCCTCTTCGCGGGTAAACCCGCTCCTACGAGGGACCGCGTTGTAGGAGCG‑GGTTTAcc                                                                                                                         >  1:463357/1‑122 (MQ=255)                                                            gTTTGGTGGTGAGGCGCCGCCGGGTCTTGGCCAGCGCTTG‑AGCCTTGTGTT‑GCCTGTGCTGGCCTCTTCGCGGGTAAACCCGCTCCTACGAGGGACCGCGTTGTAGGAGCG‑GGTTTACCCGCGAAGAGGCCGGTACAGGCGAAATGCTGa                                                                                          <  1:1319952/150‑1 (MQ=255)                                                                    gtgAGGCGCCGCCGGGTCTTGGCCAGCGCTTG‑AGCCTTGTGTT‑GCCTGTGCTGGCCTCTTCGCGGGTAAACCCGCTCCTACGAGGGACCGCGCTG‑AAGAGCGTGGTGTACCCGCGAAGAGGCCGGTACAGGCGAAATGCTGAGCCGaaaa                                                                                  >  2:438671/1‑150 (MQ=38)                                                                     tgAGGCGCCGCCGGGTCTTGGCCAGCGCTTG‑AGCCTTGTGTT‑GCCTGTGCTGGCCTCTTCGCGGGTAAACCCGCTCCTACGAGGGACCGCGTTGTAGGAGCG‑GGTTTACCCGCGAAGAGGCCGGTACAGGCGAAATGCTGAGCCGAAAAt                                                                                 <  1:435209/150‑1 (MQ=255)                                                                      gAGGCGCCGCCGGGTCTTGGCGAGCGCTTG‑AGGCTTGTGTT‑GCCTGTGCTGGCCTCTTCGCGGGTAAACCCGCTCCTACGAGGGCCCGCGTTGTCGGAGGG‑GGTTTACCCGCGAAGAGGCCGGTACAGGCGAAATGCTGAGCCGAAAATg                                                                                <  2:949680/150‑1 (MQ=38)                                                                        ggCGCCGCCGGGTCTTGGCCAGCGCTTG‑AGCCTTGTGTT‑GCCTGTGCTGGCCTCTTCGCGGGTAAACCCGCTCCTACGAGGGACCGCGTTGTAGGAGCG‑GGTTTACCCGCGAAGAGGCCGGGGGTTGCGAAATGCTGAGCCGAAAATGCa                                                                              <  1:438671/150‑1 (MQ=37)                                                                        ggCGCCGCCGGGTCTTGGCCAGCGCTTG‑AGCCTTGTGTT‑GCCTGTGCTGGCCTCTTCGCGGGTAAACCCGCTCCTACCAGGGACCGCGTTGTAGGAGCG‑GGTTTACCCGCGAACGCTCCGGTACAGGCGAAATGCTGAGCCGAAAATGCa                                                                              <  1:908595/150‑1 (MQ=38)                                                                         gcgcCGCCGGGTCTTGGCCAGCGCTTG‑AGCCTTGTGTT‑GCCTGTGCTGGCCTCTTCGCGGGTAAACCCGCTCCTACGAGGGACCGCGTTGTAGGAGCG‑GGTTTACCCGCGAAGAGGCCGGTACATGCGGAATGCTTAGCCGAAACTGCag                                                                             >  2:255705/1‑150 (MQ=255)                                                                            ccgccgTGTCTTGGCCAGCGCTTG‑CGCCTTGTGTT‑GCCTGTGCTGGCCTCTTCGCGGGTAAACCCGCTCCTACGAGGGACCGCGTTGTAGGAGCG‑GGTTTACCCGCGAAGAGGCCGGTACAGGCGAAATGCTGAGCCGAAAATGCAGAGt                                                                          <  1:1277722/150‑1 (MQ=255)                                                                              gccgGGTCTTGGCCAGCGCTTG‑AGCCTTGTGTT‑GCCTGTGCTGGCCTCTTCGCGGGTAAACCCGCTCCTACGAGGGACCGCGTTGTa                                                                                                                                        >  1:167647/1‑87 (MQ=255)                                                                              gccgGGTCTTGGCCAGCGCTTG‑AGCCTTGTGTT‑GCCTGTGCTGGCCTCTTCGCGGGTAAACCCGCTCCTACGAGGGACCGCGTTGTa                                                                                                                                        <  2:167647/87‑1 (MQ=255)                                                                                cgGGTCTTGGCCAGCGCTTG‑AGCCTTGTGTT‑GCCTGTGCTGGCCTCTTCGCGGGTAAACCCGCTCCTACGAGGGACCGCGTTGTAGGAGCG‑GGTTTACCCGCGAAGAGGCCGGTACAGGCGAAATGCTGAGCCGAAAATGCAGAGTCGAt                                                                      >  1:1147705/1‑150 (MQ=255)                                                                                    tCTTGGCCAGCGCTTG‑AGCCTTGTGTT‑GCCTGTGCTGGCCTCTTCGCGGGTAAACCCGCTCCTACGAGGGACCGCGTTGTAGGAGCG‑GGTTTACCCGCGAAGAGGCCGGTACAGGCGAAATGCTGAGCCGAAAATGCAGAGTCGATCTGt                                                                  >  2:1277615/1‑150 (MQ=255)                                                                                    tCTTGGCCAGCGCTTG‑AGCCTTGTGTT‑GCCTGTGCTGGCCTCTTCGCGGGTAAACCCGCTCCTACGAGGGACCGCGTTGTAGGAGCA‑TGGTTACCCGCGAAGAGGCCGGTACAGGCGAAATGCTGAGCCGAAAATGCAGAGTCGATCTGt                                                                  >  1:507177/1‑150 (MQ=255)                                                                                      ttGGCCAGCGCTTG‑AGCCTTGTGTT‑GCCTGTGCTGGCCTCTTCGCGGGTAAACCCGCTCCTACGAGGGACCGCGTTGTAGGAGCG‑GGTTTACCCGCGAAGAGGCCg                                                                                                            >  1:364593/1‑106 (MQ=255)                                                                                      ttGGCCAGCGCTTG‑AGCCTTGTGTT‑GCCTGTGCTGGCCTCTTCGCGGGTAAACCCGCTCCTACGAGGGACCGCGTTGTAGGAGCG‑GGTTTACCCGCGAAGAGGCCg                                                                                                            <  2:364593/106‑1 (MQ=255)                                                                                        ggCCAGCGCTTG‑AGCCTTGTGTT‑GCCTGTGCTGGCCTCTTCGCGGGTAAACCCGCTCCTACGAGGGACCGCGTTGTAGGAGCG‑GGTTTACCCGCGAAGAGGCCGGTACAGGCGAAATGCTGa                                                                                          <  2:1029560/122‑1 (MQ=255)                                                                                        ggCCAGCGCTTG‑AGCCTTGTGTT‑GCCTGTGCTGGCCTCTTCGCGGGTAAACCCGCTCCTACGAGGGACCGCGTTGTAGGAGCG‑GGTTTACCCGCGAAGAGGCCGGTACAGGCGAAATGCTGa                                                                                          >  1:1029560/1‑122 (MQ=255)                                                                                          ccAGCGCTTG‑AGCCTTGTGTT‑GCCTGTGCTGGCCTCTTCGCGGGTAAACCCGCTCCTACGAGGGACCGCGTTGTAGGAGCg‑g                                                                                                                                >  1:175927/1‑82 (MQ=255)                                                                                          ccAGCGCTTG‑AGCCTTGTGTT‑GCCTGTGCTGGCCTCTTCGCGGGTAAACCCGCTCCTACGAGGGACCGCGTTGTAGGAGCg‑g                                                                                                                                <  2:175927/82‑1 (MQ=255)                                                                                           cAGCGCTTG‑AGCCTTGTGTT‑GCCTGTGCTGGCCTCTTCGCGGGTAAACCCGCTCCTACGAGGGACCGCGTTGTAGGAGCG‑GGTTTACCCGCGAAGAGGCCGGTACAGGCGAAATGCTGAGCCGAAAATGCAGAGTCGATCTGTCGCGccc                                                           >  1:956339/1‑150 (MQ=255)                                                                                                 ttG‑AGCCTTGTGTT‑GCCTGTGCTGGCCTCTTCGCGGGTAAACCCGCTCCTACGAGGGACCGCGTTGTAGGAGCG‑GGTTTACCCGCGAAGAGGCCGGTACAGGCGAAATGCTGAGCCGAAAATGCAGAGTCGATCTGTCGCGCCCCGATCt                                                     >  1:483996/1‑150 (MQ=255)                                                                                                 ttG‑AGCCTTGTGTT‑GCCTGTGCTGGCCTCTTCGCGGGTAAACCCGCTCCTACGAGGGACCGCGTTGTAGGAGCG‑GGTTTACCCGCGAAGAGGCCGGTACAGGCGAAATGCTGAGCCGAAAATGCAGAGTCGATCTGTCGCGCCCCGATCt                                                     <  2:483996/150‑1 (MQ=255)                                                                                                       ccTTGTGTT‑GCCTGTGCTGGCCTCTTCGCGGGTAAACCCGCTCCTACGAGGGACCGCGTTGTAGGAGCG‑GGTTTACCCGCGAAGAGGCCGGTACAGGCGAAATGCTGAGCCGAAAATGCAGAGTCGATCTGTCGCGCCCCGATCTGGAAc                                                >  2:155252/1‑150 (MQ=255)                                                                                                        cTTGTGTT‑GCCTGTGCTGGCCTCTTCGCGGGTAAACCCGCTCCTACGa                                                                                                                                                      <  1:1411939/48‑1 (MQ=255)                                                                                                        cTTGTGTT‑GCCTGTGCTGGCCTCTTCGCGGGTAAACCCGCTCCTACGa                                                                                                                                                      >  2:1411939/1‑48 (MQ=255)                                                                                                        cTTGTGTT‑GCCTATGCTGGCCTCTTCGCGGGTAAACCCGCTCCTACGAGGGACCGCGTTGTAGGAGCG‑GGTTTACCCGCGAAGAGGCCGGTACAGGCGAAATGCTGAGCCGAAAATGCAGAGTCGATCTGTCGCGCCCCGATCTGGaa                                                 <  1:547470/148‑1 (MQ=255)                                                                                                        cTTGTGTT‑GCCTATGCTGGCCTCTTCGCGGGTAAACCCGCTCCTACGAGGGACCGCGTTGTAGGAGCG‑GGTTTACCCGCGAAGAGGCCGGTACAGGCGAAATGCTGAGCCGAAAATGCAGAGTCGATCTGTCGCGCCCCGATCTGGaa                                                 >  2:547470/1‑148 (MQ=255)                                                                                                         ttGTGTT‑GCCTGTGCTGGCCTCTTCGCGGGTAAACCCGCTCCTACGAGGGACCGCGTTGTAGGAGCG‑GGTTTACCCGCGAAGAGGCCGGTACAGGCGAAATGCTGAGCCGAAAATGCAGAGTCGATCTGTCGCGCCCCGATCTGGAAcgc                                              >  2:816727/1‑150 (MQ=255)                                                                                                                 gCCTGTGCTGGCCTCTTCGCGGGTAAACCCGCTCCTACGAGGGACCGCGTTGTAGGAGCG‑GGTTTACCCGCGAAGAGGCCGGTACAGGCGAAATGCTGAGCCGAAAATGCAGAGTCGATCTGTCGCGCCCCGa                                                        <  1:574187/133‑1 (MQ=255)                                                                                                                 gCCTGTGCTGGCCTCTTCGCGGGTAAACCCGCTCCTACGAGGGACCGCGTTGTAGGAGCG‑GGTTTACCCGCGAAGAGGCCGGTACAGGCGAAATGCTGAGCCGAAAATGCAGAGTCGATCTGTCGCGCCCCGa                                                        >  2:574187/1‑133 (MQ=255)                                                                                                                    tgtgCTGGCCTCTTCGCGGGTAAACCCGCTCCTACGAGGGACCGCGTTGTAGGAGCG‑GGtt                                                                                                                             <  1:1163084/61‑1 (MQ=255)                                                                                                                    tgtgCTGGCCTCTTCGCGGGTAAACCCGCTCCTACGAGGGACCGCGTTGTAGGAGCG‑GGtt                                                                                                                             >  2:1163084/1‑61 (MQ=255)                                                                                                                    tgtgCTGGCCTCTTCGCGGGTAAACCCGCTCCTACGAGGGACCGCGTTGTAGGAGCG‑GGTTTACCCGCGAAGAGGCCGGTACAGGCGAAATGCTGAGc                                                                                        >  1:463088/1‑98 (MQ=255)                                                                                                                    tgtgCTGGCCTCTTCGCGGGTAAACCCGCTCCTACGAGGGACCGCGTTGTAGGAGCG‑GGTTTACCCGCGAAGAGGCCGGTACAGGCGAAATGCTGAGc                                                                                        <  2:463088/98‑1 (MQ=255)                                                                                                                         tGGCCTCTTCGCGGGTAAACCCGCTCCTACGAGGGACCGCCTTGTAGGAGCG‑GGTTTACCCGCGAAGAGGCCGGTACAGGCGAAATGCTGAGCCGAAAATGCAGAGTCGATCTGTCGCGCCCCGATCTGGAACGCGCGGTTtagcctagc                               >  1:1500453/1‑150 (MQ=255)                                                                                                                           gCCTCTTCGCGGGTAAACCCGCTCCTACGAGGGACCGCGTTGTAGGAGCG‑GGTTTACCCGCGAAGAGGCCGGTACAGGCGAAATGCTg                                                                                           >  2:973313/1‑88 (MQ=255)                                                                                                                           gCCTCTTCGCGGGCCAACCCGCTCCTACGAGGGACCGCGTTGTAGGAGCG‑GGTTTACCCGCGAAGAGGCCGGTACAGGCGAAATGCTg                                                                                           <  1:973313/88‑1 (MQ=255)                                                                                                                            ccTCTTCGCGGGTAAACCCGCTCCTACGAGGGACCGCGTTGTAGGAGCG‑GGTTTACCCGCGAAGAGGCCGGTACa                                                                                                       <  2:727552/75‑1 (MQ=255)                                                                                                                            ccTCTTCGCGGGTAAACCCGCTCCTACGAGGGACCGCGTTGTAGGAGCG‑GGTTTACCCGCGAAGAGGCCGGTACa                                                                                                       >  1:727552/1‑75 (MQ=255)                                                                                                                                   gcgGGTAAACCCGCTCCTACGAGGGACCGCGTTGTAGGAGc                                                                                                                                   <  1:963493/41‑1 (MQ=255)                                                                                                                                   gcgGGTAAACCCGCTCCTACGAGGGACCGCGTTGTAGGAGc                                                                                                                                   >  2:963493/1‑41 (MQ=255)                                                                                                                                    cgGGTAAACCCGCTCCTACGAGGGACCGCGTTGTAGGAGCG‑GGTTTACCCGCGAAGAGGCCGGTACAGGCGAAATGCTGAGCCGAAAATGCAGAGTCGATCTGTCGCGCCCCGATCTGGAACGCGCGTGTTAGCCTAGCCGGCTACctct                    >  1:1426500/1‑150 (MQ=255)                                                                                                                                     gggTAAACCCGCTCCTACGAGGGACCGCGTTGTAGGAGCG‑GGTTTACCCGCGAAGAGGCCGGTACAGGCGAAATGCTGAGCCGAAAATGCAGAGTCGATCTGTCGCGCCCCGATCTGGAACGCGCGTGTTAGCCTAGCCGGCTACCTCTg                   <  2:643829/150‑1 (MQ=255)                                                                                                                                       gTAAACCCGCTCCTACGAGGGACCGCGTTGTAGGAGCG‑GGTTTACCCGCGAAGAGGCCGGTACAGGCGAAATGCTGAGCCGAAAATGCAGAGTCGATCTGTCGCGCCCCGATCTGGAACGCGCgtgt                                        >  1:554755/1‑127 (MQ=255)                                                                                                                                       gTAAACCCGCTCCTACGAGGGACCGCGTTGTAGGAGCG‑GGTTTACCCGCGAAGAGGCCGGTACAGGCGAAATGCTGAGCCGAAAATGCAGAGTCGATCTGTCGCGCCCCGATCTGGAACGCGCgtgt                                        <  2:554755/127‑1 (MQ=255)                                                                                                                                           aCCCGCTCCTACGAGGGACCGCGTTGTAGGAGCG‑GGTTTACCCGCGAAGAGGCCGGTACAGGCGAAATGCTGAGCCGAAAATGCAGAGTCGATCTGTCGCGGCCCGATCTGGAACGCGCGTGTTAGCCTAGCCGGCTACCTCTGACaaga             <  1:427654/150‑1 (MQ=255)                                                                                                                                            cccGCTCCTACGAGGGACCGCGTTGTAGGAGCG‑GGTTTACCCGCGAAGAGGCCGGTACAGGCGAAATGCTGAGCCGAAAATGCAGAGTCGAt                                                                      <  2:207396/92‑1 (MQ=255)                                                                                                                                            cccGCTCCTACGAGGGACCGCGTTGTAGGAGCG‑GGTTTACCCGCGAAGAGGCCGGTACAGGCGAAATGCTGAGCCGAAAATGCAGAGTCGAt                                                                      >  1:207396/1‑92 (MQ=255)                                                                                                                                            cccGCTCCTACGAGGGACCGCGTTGTAGGAGCG‑GGTTTACCCGCGAAGAGGCCGGTACAGGCGAAATGCTGAGCCGAAAATGCAGAGTCGATCTGTCGCGCCCCGATCTGGAACGCGCGTGTTAGCCTAGCCGGCTACCTCTGACaagaa            >  1:827267/1‑150 (MQ=255)                                                                                                                                               gCTCCTACGAGGGACCGCGTTGTAGGAGCG‑GGTTTACCCGCGAAGAGGCCGGTACAGGCGaaa                                                                                                <  1:1456245/63‑1 (MQ=255)                                                                                                                                               gCTCCTACGAGGGACCGCGTTGTAGGAGCG‑GGTTTACCCGCGAAGAGGCCGGTACAGGCGaaa                                                                                                >  2:1456245/1‑63 (MQ=255)                                                                                                                                               gCTCCTACGAGGGACCGCGTTGTAGGAGCG‑GGTTTACCCGCGAAGAGGCCGGTACAGGCGAAATGCTGAGCCGAAAATGCAGAGTCGATCTGTCGCGCCCCGATCTGGAACGCGCGTGTTAGCCTAGCCGGCTACCTCTGACAAGAAGAc         <  1:816727/150‑1 (MQ=255)                                                                                                                                                ccccTACGAGGGACCGCGTTGTAGGAGCG‑GGTTCACCCGCGAAGAGGCCGGTACAGGCGAAATGCTGAGCCGAAAATGCAGAGTCGATCTGTCGCGCCCCGATCTGGAACGCGCGTGTTAGCCTAGCCGGCTACCTCTGACAAGAAGACt        <  1:255705/148‑1 (MQ=255)                                                                                                                                                cTCCTACGAGGGACCGCGTTGTAGGAGCG‑GGTTTACCCGCGAAGAGGCCGGTACAGGCGAAATGCTGAGCCGAAAATGCAGAGTCGATCTGTCGCGCCCCGATCTGGAACGCGCGTGTTAGCCTAGCCGGCTACCTCTGACAAGAAGACt        <  1:155252/150‑1 (MQ=255)                                                                                                                                                    tACAAGGGACCGCGTTGTACGAGCG‑GGTTTACCCGCGAAGAGGCCGGTACAGGCGAAATGCTGAGCCGAAAATGCAGAGTCGATCTGTCGCGCCCCGATCTGGAACGCGCGTGTTAGCCTAGCCGGCTACCTCTGACAAGAAGACTGCAg    >  2:1240144/1‑150 (MQ=255)                                                                                                                                                      cGAGGGACCGCGTTGTAGGAGCG‑GGTTTACCCGCGAAGAGGCCGGTACAGGCGAAATGCTGAGCCGAAAATGCAGAGTCGATCTGTCGCGCCCCGATCTGGAACGCGCGTGTTAGCCTAGCCGGCTACCTCTGACAAGAAGACTGCAGcc  <  2:956339/150‑1 (MQ=255)                                                                                                                                                      |                                                                                                                                                       GCTGGGGGTGATGTTCCCGCTGGTGGGGGTGTCGATGGTGGTGATGTGGGGGGTGGATAGTTTGGTGGTGAGGCGCCGCCGGGTCTTGGCCAGCGCTTG‑AGCCTTGTGTT‑GCCTGTGCTGGCCTCTTCGCGGGTAAACCCGCTCCTACGAGGGACCGCGTTGTAGGAGCG‑GGTTTACCCGCGAAGAGGCCGGTACAGGCGAAATGCTGAGCCGAAAATGCAGAGTCGATCTGTCGCGCCCCGATCTGGAACGCGCGTGTTAGCCTAGCCGGCTACCTCTGACAAGAAGACTGCAGCC  >  NC_002947/5506490‑5506786

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.