New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 254680 = | 67 (1.370) | 7 (0.150) | 7/238 | NT | 10.2% | coding (437/1731 nt) | PP_0203 | dipeptidase |
? | NC_002947 | 254712 = | 59 (1.260) | coding (405/1731 nt) | PP_0203 | dipeptidase |
CGCATCAAGTATGGCAAAGCCGCTACCGAAACCCTGCGCGAACTGGTAGCCATCCCCACCTTCAATGTCGAGGGTACGCCGCAGTACGAAAACCCTGAATTCCTCAAGATCGCCGACAAGATCAAGGCCTTGGCCGACCGCTTCGGCC‑TGGCCTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/254834‑254680 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggccttGATCTTGTCGGCGATCTTGAGGAATTCAGGGTTTTCGTACTGCGGCGTACCCTCGACATTGAAGGTGGGGATGGCTACCAGTTCGCGCAGGGTTTCGGTAGCGGCTTTGCCATACTTGATGCGGGTATACAGGCCGAGCAGGCGGTTG > NC_002947/254712‑254859 CGCATCAAGTATGGCAAAGCCGCTACCGAAACCCTGCGCGAACTGGTAGCCATCCCCACCTCCAATGTCGAGGGTACGCCGCAGTACGAAAACCCTGAATTCCTCAAGATCGCCGACAAGATCAAGGCCTTGGCCGACCGCTTCGGCC‑TG > 1:122963/1‑150 GCATCAAGTATGGCAAAGCCGCTACCGAAACCCTGCGCGAACTGGTAGCCATCCCCACCTTCAATGTCGAGGGTACGCCGCAGTACGAAAACCCTGAATTCCTCAAGATCGCCGACAAGATCAAGGCCTTGGCCGACCGCTTCGGCC‑TGG > 2:770597/1‑150 GATCAAGGCCTTGGCCGACCGCTTCGGCC‑TGGCCTTGATCTTGTCGGCGATCTTGAGGAATTCAGGGTTTTCGTACTGCGACGTACGCTCGACATTGAAGGTGGGGATGGCTACCAGTTCGCGCAGGGTTTCGGTAGCGGCTTTTCCATA > 1:686538/1‑150 GGCCTTGGCCGACCGCTTCGGCC‑TGGCCTTGATCTTGTCGGCGATCTTGAGGAATTCAGGGTTTTCGTACTGCGGCGTACCCTCGACATTGAAGGTGGGGATGGCTACCAGTTCGCGCAGGGTTTCGGTAGCGGCTTTGCCATACTTGAT > 2:4878/1‑150 GCCTTGGCCGACCGCTTCGGCC‑TGGCCTTGATCTTGTCGGCGATCTTGAGGAATTCAGGGTTTTCGTACTGCGGCGTACCCTCGACATTGAAGGTGGGGATGGCTAC > 1:791390/1‑107 GCCTTGGCCGACCGCTTCGGCC‑TGGCCTTGATCTTGTCGGCGATCTTGAGGAATTCAGGGTTTTCGTACTGCGGCGTACCCTCGACATTGAAGGTGGGGATGGCTAC < 2:791390/107‑1 CTTGGCCGACCGCTTCGGCCAAGGCCTTGATCTTGTCGGCGATCTTGAGGAATTCAGGGTTTTCGTACTGCGGCGTACCCTCGACATTGAAGGTGGGGATGGCTACCAGTTCGCGCAGGGTTTCGGTAGCGGCTTTGCCATACTTGATGC > 1:1021446/1‑150 TTGGCCGACCGCTTCGGCC‑TGGCCTTGATCTTGTCGGCGATCTTGAGGAATTCAGGGTTTTCGTACTGCGGCGTACCCTCGACATTGAAGGTGGGGATGGCTACCAGTTCGCGCAGGGTTTCGGTAGCGGCTTTGCCATACTTGATGCGG < 1:4878/150‑1 TTGGCCGACCGCTTCGGCC‑TGGCCTTGATCTTGTCGGCGATCTTGAGGAATTCAGGGTTTTCGTACTGCGGCGTACCCTCGACATTGAAGGTGGGGATGGCTACCAGTTCGCGCAGGGTTTCGGTAGCGGCTTTGCCATACTTGATGCGG > 2:215347/1‑150 GGCCTTTATCTTGTCGGCGATCTTGAGGAATTCAGGGTTTTCGTACTGCGGCGTACCCTCGACATTGAAGGTGGGGATGGCTACCAGTTCGCGCAGGGTTTCGGTAGCGGCTTTGCCATACTTGATGCGGGTATACAGGCCGAGCAGGCG < 2:1045856/150‑1 CTTGATCTTGTCGGCGATCTTGAGGAATTCAGGGTTTTCGTACTGCGGCGTACCCTCGACATTGAAGGTGGGGATGGCTA < 1:827302/80‑1 CTTGATCTTGTCGGCGATCTTGAGGAATTCAGGGTTTTCGTACTGCGGCGTACCCTCGACATTGAAGGTGGGGATGGCTA > 2:827302/1‑80 TTGATCTTGTCGGCGATCTTGAGGAATTCAGGGTTTTCGTACTGCGGCGTACCCTCGACATTGAAGGTGGGGATGGCTACCAGTTCGCGCAGGGTTTCGGTAGCGGCTTTGCCATACTTGATGCGGGTATACAGGCCGAGCAGGCGGTTG > 2:260841/1‑150 CGCATCAAGTATGGCAAAGCCGCTACCGAAACCCTGCGCGAACTGGTAGCCATCCCCACCTTCAATGTCGAGGGTACGCCGCAGTACGAAAACCCTGAATTCCTCAAGATCGCCGACAAGATCAAGGCCTTGGCCGACCGCTTCGGCC‑TGGCCTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/254834‑254680 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggccttGATCTTGTCGGCGATCTTGAGGAATTCAGGGTTTTCGTACTGCGGCGTACCCTCGACATTGAAGGTGGGGATGGCTACCAGTTCGCGCAGGGTTTCGGTAGCGGCTTTGCCATACTTGATGCGGGTATACAGGCCGAGCAGGCGGTTG > NC_002947/254712‑254859 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |