| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 278734 = | 44 (0.900) | 3 (0.080) | 3/202 | NT | 9.9% | intergenic (‑229/+86) | PP_0224/sctC | DszC family monooxygenase/sulfur compound ABC transporter ATP‑binding protein |
| ? | NC_002947 | 278805 = | 19 (0.480) | intergenic (‑300/+15) | PP_0224/sctC | DszC family monooxygenase/sulfur compound ABC transporter ATP‑binding protein | |||||
CAAGGCCCTGTTTGCAGCGCCGAAGGAAGAGCGTACGCGGCAGTTCTTGCGCAAGTTCCTCGGGACTGCGGCCTCCGAGTAAACCTGTTCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGTGCACAGATCTTGAGGCATGTGTGTAGGAGCGGGTTTACCCGCGAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/278901‑278734‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgtaggagcgggtttacccgcgaaAGGGCCGGAACAGGTTTACTCGGAGGCCGCAGTCCCGAGGAACTTGCGCAAGAACTGCCGCGTACGCTCTTCCTTCGGCGCTGCAAACAGGGCCTTGGCCTCGCCTTGCTCCACGATCACGCCTTTGTCGAAGAAAATCACCCG > NC_002947/278805‑278948 CAAGGCCCTGTTTGCAGCGCCGAAGGAAGAGCGTACGCGGCAGTTCTTGCGCAAGTTCCTCGGGACTGCGGCCTCCGAGTAAACCTGTTCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGTGCACAGATCTTGAGGCATGTGTGTAGG > 1:1203635/1‑150 CTGTTTGCAGCGCCGAAGGAAGAGCGTACGCGGCAGTTCTTGCGCAAGTTCCTCGGGACTGCGGCCTCCGAGTAAACCTGTTCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGTGCACAGATCTTGAGGCATGTGTGTAGGAGCGGGT < 2:175863/150‑1 GTTTGCAGCGCCGAAGGAAGAGCGTACGCGGCAGTTCTTGCGCAAGTTCCTCGGGACTGCGGCCTCCGAGTAAACCTGTTCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGTGCACAGATCTTGAGGCATGTGTGTAGGAGCGGGTTT < 2:1203635/150‑1 GTTTGCAGCGCCGAAGGAAGAGCGTACGCGGCAGTTCTTGCGCAAGTTCCTCGGGACTGCGGCCTCCGAGTAAACCTGTTCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGTGCACAGATCTTGAGGCATGTGTGTAGGAGCGGGTTT > 1:813045/1‑150 TTGCAGCGCCGAAGGAAGAGCGTACGCGGCAGTTCTTGCGCAAGTTCCTCGGGACTGCGGCCTCCGAGTAAACCTGTTCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGTGCACAGATCTTGAGGCATGTGTGTAGGAGCGGGTTTAC < 1:886402/150‑1 GCCGAAGGAAGAGCGTACGCGGCAGTTCACGCGCTTGCCCTACGCGACTGTGTTCTCCGATTAAACCTGTTCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGTGCACAGATCTTGAGGCATGTGTGTAGGAGCGGGTTTACCCGCGAA < 2:851721/150‑1 CGAAGGAAGAGCGTACGCGGCAGTTCTTGCGCAAGTTCCTCGGGACTGCGGCCTCCGAGTAAACCTGTTCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGTGCACAGATCTTGAGGCATGTGTGTAGGAGCGGGTAAACCCGCtccta < 2:1023116/150‑6 AAGAGCGTACGCGGCAGTTCTTGCGCAAGTTCCTCGGGACTGCGGCCTCCGAGTAAACCTGTTCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGTGCACAGATCTTGAGGCATGTGTGTAGGAGCGGGTTTAC > 2:1178539/1‑135 AAGAGCGTACGCGGCAGTTCTTGCGCAAGTTCCTCGGGACTGCGGCCTCCGAGTAAACCTGTTCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGTGCACAGATCTTGAGGCATGTGTGTAGGAGCGGGTTTAC < 1:1178539/135‑1 CCCTTTCGCGGGTAAACCCGCTCCTACAGTGCACAGATCTTGAGGCATGTGTGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGAACAGGTTTACTCGGAGGCCGCAGTCCCGAGGAACTTGCGCAGGAACTGCCGCGTACGCTCTTCCTT > 2:441395/1‑150 CCGCTCCTACAGTGCACAGATCTTGAGGCATGTGTGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGAACAGGTTTACTCGGAGGCCGCAGTCCCGAGGAACTTGCGCAAGA > 1:629282/1‑111 CCGCTCCTACAGTGCACAGATCTTGAGGCATGTGTGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGAACAGGTTTACTCGGAGGCCGCAGTCCCGAGGAACTTGCGCAAGA < 2:629282/111‑1 TGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGAACAGGTTTACTCGGAGGCCGCAGTCCCGAGGAACTTGCGCAAGAACTGCCGCGTACGCTCTTCCTTCGGCGCTGCAAACAGGGCCTTGGCCTCGCCTTGCTCCACGATCACGCCTTT > 2:283338/1‑150 TGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGAACAGGTTTACTCGGAGGCCGCAGTCCCGAGGAACTTGCGCAAGAACTGCCGCGTACGCTCTTCCTTCGGCGCTGCAAACAGGGCCTTGGCCTCGCCTTGCTCCACGATCACGCCTTT > 2:867973/1‑150 AGCGGGTTTACCCGCGAAAGGGCCGGAACAGGTTTACTCGGAGGCCGCAGTCCCGAGGAACTTGCGCAAGAACTGCCGCGTACGCTCTTCCTTCGGCGCTGCAAACAGTGCCTTGGCCTCGCCTTGCTCCACGATCACGCCTTTGTCGAA < 1:851721/150‑1 TTTACCCGCGAAAGGGCCGGAACAGGTTTACTCGGAGGCCGCAGTCCCGAGGAACTTGCGCAAGAACTGCCGCGTACGCTCTTCCTTCGGCGCTGCAAACAGGGCCTTGGCCTCGCCTTGCTCCACGATCACGCCTTTGTCGAAGAAAAT > 2:737127/1‑150 CCGCGAAAGGGCCGGAACAGGTTTACTCGGAGGCCGCAGTCCCGAGGAACTTGCGCAAGAACTGCCGCGTACGCTCTTCCTTCGGCGCTGCAAACAGGGCCTTGGCCTCGCCTTGCTCCACGATCACGCCTTTGTCGAAGAAAATCACCC > 2:1070677/1‑150 CCGCGAAAGGGCCGGAACAGGTTTACTCGGAGGCCGCAGTCCCGAGGAACTTGCGCAAGAACTGCCGCGTACGCTCTTCCTTCGGCGCTGCAAACAGGGCCTTGGCCTCGCCTTGCTCCACGATCACGCCTTTGTCGAAGAAAATCACCC > 1:738273/1‑150 CGCGAAAGGGCCGGAACAGGTTTACTCGGAGTCCGCAGTCCCGAGGAACTTGCGCAAGAACTGCCGCGTACGCTCTTCCTTCGGCGCTGCAAACAGACCGCTTGCCTCGCCTTGCTCCACGATCACGCCTTTGTCGAAGAAAATCACCCG > 1:403098/1‑150 CGCGAAAGGGCCGGAACAGGTTTACTCGGAGGCCGCAGTCTCGAGGAACTTGCGCAAGAACTGCCGCGTACGCTCTTCCTTCGGCGCTGCAAAAAGGGCCTTGGCCTCGCCTTGCTCCACGATCACGCCTTTGTCGAAGAAAATCACCCG > 2:472776/1‑150 CAAGGCCCTGTTTGCAGCGCCGAAGGAAGAGCGTACGCGGCAGTTCTTGCGCAAGTTCCTCGGGACTGCGGCCTCCGAGTAAACCTGTTCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGTGCACAGATCTTGAGGCATGTGTGTAGGAGCGGGTTTACCCGCGAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/278901‑278734‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgtaggagcgggtttacccgcgaaAGGGCCGGAACAGGTTTACTCGGAGGCCGCAGTCCCGAGGAACTTGCGCAAGAACTGCCGCGTACGCTCTTCCTTCGGCGCTGCAAACAGGGCCTTGGCCTCGCCTTGCTCCACGATCACGCCTTTGTCGAAGAAAATCACCCG > NC_002947/278805‑278948 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |