| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 380858 | 27 (0.550) | 5 (0.120) | 5/204 | NT | 16.9% | intergenic (+45/+64) | gbcB/PP_0317 | glycine‑betaine dioxygenase subunit/methyl‑accepting chemotaxis transducer |
| ? | NC_002947 | = 380892 | 27 (0.670) | intergenic (+79/+30) | gbcB/PP_0317 | glycine‑betaine dioxygenase subunit/methyl‑accepting chemotaxis transducer | |||||
TCAAACTGGGCGGCGAGGTGGAAATGGAGCACAACGGCGGGATTACCGAAGAGGACGAAGCCGAGGGCTACATCCTGTCGTGCTGCAGCGTGCCGAAAGGGGATGTGCGGATCGATTACTGATCCAGTGGCCAGTCTGGCTTCTTCGCGGGCACGCCCGCTCCCACA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/380692‑380858‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tcgcgggcacgcccgctcccacaAGGTTCACCGCAGTCCTGAAGATAGCGATGACCCTGTGGGAGCGGGCGTGCCCGCGAAGAAGCCAGACTGGCCACTGGATCAGTAATCGATCCGCACATCCCCTTTCGGCACGCTGCAGCACGACAGGATGTAGCCCTCGGCTTCGTC < NC_002947/380892‑380745 TCAAACTGGGCGGCGAGGTGGAAATGGAGCACAACGGCGGGATTACCGAAGAGGACGAAGCCGAGGGCTACATCCTGTCGTGCTGCAGCGTGCCGAAAGGGGATGTGCGGATCGATTACTGATCCAGTGGCCAGTCTGGCTTCTTCGCGG > 1:453089/1‑150 TGGGCGGCGAGGTGGAAATGGAGCACAACGGCGGGATTACCGAAGAGGACGAAGCCGAGGGCTACATCCTGTCGTGCTGCAGCGTGCCGAAAGGGGATGTGCGGATCGATTACTGATCCAGTGGCCAGTCTGGCTTCTTAGCGGGCACGC > 1:910415/1‑150 GCGAGGTGGAAATGGAGCACAACGGCGGGATTACCGAAGAGGACGAAGCCGAGGGCTACATCCTGTCGTGCTGCAGCGTGCCGAAAGGGGATGTGCGGATCGATTACTGATCCAGTGGCCAGTCTGGCTTCTTCGCGGGCGTGCCCGCga < 2:359659/150‑3 CGAGGTGGAAATGGAGCACAACGGCGGGATTACCGAAGAGGACGAAGCCGAGGGCTACATCCTGTCGTGCTGCAGCGTGCCGAAAGGGGATGTGCGGATCGATTACTGATCCAGTGGCCAGTCTGGCTTCTTCGCGGGCACGCCCGCTCC < 2:1092585/150‑1 GAGGTGGAAATGGAGCACAACGGCGGGATTACCGAAGAGGACGAAGCCGAGGGCTACATCCTGTCGTGCTGCAGCGTGCCGAAAGGGGATGTGCGGATCGATTACTGATCCAGTGGCCAGTCTGGCTTCTTCGCGGGCACGCCCGCTCCC < 2:525838/150‑1 TGGAAATGGAGCACAACGGCGGGATTACCGAAGAGGACGAAGCCGAGGGCTACATCCTGTCGTGCTGCAGCGTGCCGAAAGGGGATGTGCGGATCGATTACTGATCCAGTGGCCAGTCTGGCTTCTTGGCGGGCACGCCCGCTCCCcctc < 2:374749/150‑5 AATGGAGCACAACGGCGGGATTACCGAAGAGGACGAAGCCGAGGGCTACATCCTGTCGTGCTGCAGCGTGCCGAAAGGGGATGTGCGGATCGATTACTGATCCAGTGGCCAGTCTGGCTTCTTCGCGGGCACGCCCGCTCCCACAAGGTT > 2:757103/1‑150 CGAAGAGGACGAAGCCGAGGGCTACATCCTGTCGTGCTGCAGCGTGCCGAAAGGGGATGTGCGGATCGATTACTGATCCAGTGGCCAGTCTGGCTTCTTCGCGGGCGTGCCCGCgaagaa < 1:1217896/120‑7 CGAAGAGGACGAAGCCGAGGGCTACATCCTGTCGTGCTGCAGCGTGCCGAAAGGGGATGTGCGGATCGATTACTGATCCAGTGGCCAGTCTGGCTTCTTCGCGGGCGTGCCCGCgaagaa > 2:1217896/1‑114 CCGAGGGCTACATCCTGTCGTGCTGCAGCGTGCCGAAAGGGGATGTGCGGATCGATTACTGATCCAGTGGCCAGTCTGGCTTCTTCGCGGGCACGC < 2:825687/96‑1 CCGAGGGCTACATCCTGTCGTGCTGCAGCGTGCCGAAAGGGGATGTGCGGATCGATTACTGATCCAGTGGCCAGTCTGGCTTCTTCGCGGGCACGC > 1:825687/1‑96 GCTACATCCTGTCGTGCTGCAGCGTGCCGAAAGGGGATGTGCGGATCGATTACTGATCCAGTGGCCAGTCTGGCTTCTTCGCGGGCACGCCCGCTCCCACAAGGTTCACCGCAGTCCTGAAGATAGCGATGACCCTGTGGGAGCGGGCGT < 1:757103/150‑1 GAAAGGGGATGTGCGGATCGATTACTGATCCAGTGGCCAGTCTGGCTTCTTCGCGGGCACGCCCGCTCCCACAAGGTTCACCGCAGTCCTGAAGATAGCGATGACCCTGTGG < 2:479750/112‑1 GAAAGGGGATGTGCGGATCGATTACTGATCCAGTGGCCAGTCTGGCTTCTTCGCGGGCACGCCCGCTCCCACAAGGTTCACCGCAGTCCTGAAGATAGCGATGACCCTGTGG > 1:479750/1‑112 AGGGGATGTGCGGATCGATTACTGATCCAGTGGCCAGTCTGGCTTCTTCGCGGGCACGCCCGCTCCCACAAGGTTCACCGCAGTCCTGAAGATAGCGATGAC < 1:484110/102‑1 AGGGGATGTGCGGATCGATTACTGATCCAGTGGCCAGTCTGGCTTCTTCGCGGGCACGCCCGCTCCCACAAGGTTCACCGCAGTCCTGAAGATAGCGATGAC > 2:484110/1‑102 TCGCGGGCACGCCCGCTCCCACAAGGTTCACCGCAGTCCTGAAGATAGCGATGACCCTGTGGGAGCGGGCGTGCCCGCGAAGAAGCCAGACTGGCCACTGGATCAGTAATCGATCCGCACATCCCCTTTCGGCCCGCTGCAGCACGACAc > 2:1060462/1‑149 TCGCGGGCACGCCCGCTCCCACAAGGTTCACCGCAGTCCTGAAGATAGCGATGACCCTGTGGGAGCGGGCGTGCCCGCGAAGAAGCCAGACTGGCCACTGGATCAGTAATCGATCCGCACATCCCCTTTCGGCACGCTGCAGCACGACAG > 1:746776/1‑150 CGCGGGCACGCCCGCTCCCACAAGGTTCACCGCAGTCCTGAAGATAGCGATGACCCTGT > 2:1127866/1‑59 CGCGGGCACGCCCGCTCCCACAAGGTTCACCGCAGTCCTGAAGATAGCGATGACCCTGT < 1:1127866/59‑1 GCGGGCACGCCCGCTCCCACAAGGTTCACCGCAGTCCTGAAGATAGCGATGACCCTGTGGGAGCGGGCGTGCCCGCGAAGAAGCCAGACTGGCCACTGGATCAGTAATCGATCCGCACATCCCCTTTCGGCACGCTGCAGCACGACAGGA < 1:614484/150‑1 GGCACGCCCGCTCCCACAAGGTTCACCGCAGTCCTGAAGATAGCGATGACCCTGTGGGAGCGGGCGTGCCCGCGAAGAAGCCAGACTGGCCACTGGATCAGTAATCGATCCGCACATCC < 1:692373/119‑1 GGCACGCCCGCTCCCACAAGGTTCACCGCAGTCCTGAAGATAGCGATGACCCTGTGGGAGCGGGCGTGCCCGCGAAGAAGCCAGACTGGCCACTGGATCAGTAATCGATCCGCACATCC > 2:692373/1‑119 GCACGCCCGCTCCCACAAGGTTCACCGCAGTCCTGAAGATAGCGATGACCCTGTGGGAGCGGGCGTGCCCGCGAAGAAGCCAGACTGGCCACTGGATCAGTAATCGATCCGCACATCCCCTTTCGGCACGCTGCAGCACGACAGGATGTA < 2:746776/150‑1 ACGCCCGCTCCCACAAGGTTCACCGCAGTCCTGAAGATAGCGATGACCCTGTGGGAGCGGGCGTGCCCGCGAAGAAGGCAGACTGGCCACTGGATCAGTAATCGATCCGCACATC > 1:409230/1‑115 ACGCCCGCTCCCACAAGGTTCACCGCAGTCCTGAAGATAGCGATGACCCTGTGGGAGCGGGCGTGCCCGCGAAGAAGCCAGACTGGCCACTGGATCAGTAATCGATCCGCACATC < 2:409230/115‑1 GCCCGCTCCCACAAGGTTCACCGCAGTCCTGAAGATAGCGATGACCCTGTGGGAGCGGGCGTGCCCGCGAAGAAGCCAGACTGGCCACTGGATCAGTAATCGATCCGCACATCCCCTTTCGGCACGCTGCAGCACGACAGGATGTAGCCC > 2:20121/1‑150 CCCGCTCCCACAAGGTTCACCGCAGTCCTGAAGATAGCGATGACCCTGTGGGAGCGGGCGTGCCCGCGAAGAAGCCAGACTGGCCACTGGATCAGTAATCGATCCGCACATCCCCTTTCGGCACGCTGCAGCACGA < 2:996415/136‑1 CCCGCTCCCACAAGGTTCACCGCAGTCCTGAAGATAGCGATGACCCTGTGGGAGCGGGCGTGCCCGCGAAGAAGCCAGACTGGCCACTGGATCAGTAATCGATCCGCACATCCCCTTTCGGCACGCTGCAGCACGA > 1:996415/1‑136 CCGCTCCCACAAGGTTCACCGCAGTCCTGAAGATAGCGATGACCCTGTGGGAGCGGGCGTGCCCGCTAAGAAGCCAGACTGGCCACTGGATCAGTAATCGATCCGCACATCCCCTTTCGGCACGCTGCAGCACGACAGGATGTAGCCCTC > 2:910415/1‑150 CCGCTCCCACAAGGTTCACCGCAGTCCTGAAGATAGCGATGACCCTGTGGGAGCGGGCGTGCCCGCGAAGAAGC < 2:941871/74‑1 CCGCTCCCACAAGGTTCACCGCAGTCCTGAAGATAGCGATGACCCTGTGGGAGCGGGCGTGCCCGCGAAGAAGC > 1:941871/1‑74 GCTCCCACAAGGTTCACCGCAGTCCTGAAGATAGCGATGACCCTGTGGGAGCGGGCGTGCCCGCGAAGAAGCCAGACTGGCCACTGGATCAGTAATCGATCCGCACATCCCCTTTCGGCACGCTGCAGCACGACAGGATGTAGCCCTCGG > 1:1039779/1‑150 CCACAAGGTTCACCGCAGTCCTGAAGATAGCGATGACCCTGTGGGAGCGGGCGTGCCCGCGAAGAAGCCAGACTGGCCACTGGATCAGTAATCGATCCGCACATCCCCTTTCGGCACGCTGCAGCACGACAGGATGTAGCCCTCGGCTTC > 1:592968/1‑150 CACAAGGTTCACCGCAGTCCTGAAGATAGCGATGACCCTGTGGGAGCGGGCGTGCCCGCGAAGAAGCCAGACTGGCCACTGGATCAGTAATCGATCCGCACATCCCCTTTCGGCACGCTGCAGCACGACAGGATGTAGCCCTCGGCTTCG > 1:270290/1‑150 CAAGGTTCACCGCAGTCCTGAAGATAGCGATGACCCTGTGGGAGCGGGCGTGCCCGCGAAGAAGCCAGACTGGCCACTGGATCAGTAATCGATCCGCACATCCCCTTTCGGCACGCTGCAGCACGACAGGATGTAGCCCTCGGCTTCGTC < 1:662741/150‑1 AAGGTTCACCGCAGTCCTGAAGATAGCGATGACCCTGTGGGAGCGGGCGTGCCCGCGAAGAAGCCAGACTGGCCACTGGATCAGTAATCGATCCGCACATCCCCTTTCGGCACGC > 2:158811/1‑115 AAGGTTCACCGCAGTCCTGAAGATAGCGATGACCCTGTGGGAGCGGGCGTGCCCGCGAAGAAGCCAGACTGGCCACTGGATCAGTAATCGATCCGCACATCCCCTTTCGGCACGC < 1:158811/115‑1 TCAAACTGGGCGGCGAGGTGGAAATGGAGCACAACGGCGGGATTACCGAAGAGGACGAAGCCGAGGGCTACATCCTGTCGTGCTGCAGCGTGCCGAAAGGGGATGTGCGGATCGATTACTGATCCAGTGGCCAGTCTGGCTTCTTCGCGGGCACGCCCGCTCCCACA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/380692‑380858‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tcgcgggcacgcccgctcccacaAGGTTCACCGCAGTCCTGAAGATAGCGATGACCCTGTGGGAGCGGGCGTGCCCGCGAAGAAGCCAGACTGGCCACTGGATCAGTAATCGATCCGCACATCCCCTTTCGGCACGCTGCAGCACGACAGGATGTAGCCCTCGGCTTCGTC < NC_002947/380892‑380745 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |