New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 579595 = | 58 (1.180) | 4 (0.090) | 4/238 | NT | 7.2% | coding (614/657 nt) | fdoI | formate dehydrogenase‑O subunit gamma |
? | NC_002947 | 579613 = | 48 (1.030) | coding (632/657 nt) coding (1/957 nt) |
fdoI fdhE |
formate dehydrogenase‑O subunit gamma formate dehydrogenase formation protein |
TCCAGGCGCGCGGCACGCAGTTCAAACAGGTTGGCGGCGGGCAGGTGCAGAAATGGCGGCGTGACTGCCGACGCTTCGATCTGCCCGGGTTCAAGTATGATGCTCAAGCGCTCATCCTTCTTTTCGTCCGTGATCACCCGGCGTCTTGTCGCCGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/579749‑579595 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgccggGTGATCACGGACGAAAAGAAGGATGAGCGCTTGAGCATCATACTTGAACCCGGGCAGATCGAAGCGTCGGCAGTCACGCCGCCATTTCTGCACCTGCCCGCCGCCAACCTGTTTGAACTGCGTGCCGCGCGCCTGGAGCAACTGGCAGA > NC_002947/579613‑579761 TCCAGGCGCGCGGCACGCAGTTCAAACAGGTTGGCGGCGGGCAGGTGCAGAAATGGCGGCGTGACTGCCGACGCTTCGATCTGCCCGGGTTCAAGTATGATGCTCAAGCGCTCATCCTTCTTTTCGTCCGTGATCACCCGGCGTCTTGTC < 2:758905/150‑1 GGCGCGCGGCACGCAGTTCAAACAGGTTGGCGGCGGGCAGGTGCAGAAATGGCGGCGTGACTGCCGACGCTTCGATCTGCCCGGGTTCAAGTATGATGCTCAAGCGCTCATCCTTCTTTTCGTCCGTGATCACCCGGCGTCTTGTCGCCG < 2:1151470/150‑1 GGCGCGCGGCACGCAGTTCAAACAGGTTGGCGGCGGGCAGGTGCAGAAATGGCGGCGTGACTGCCGACGCTTCGATCTGCCCGGGTTCAAGTATGATGCTCAAGCGCTCATCCTTCTTTTCGTCCGTGATCACCCGGCGTCTTGTCGCCG < 2:202799/150‑1 GATCTGCCCGGGTTCAAGTATGATGCTCAAGCGCTCATCCTTCTTTTCGTCCGTGATCACCCGGCGACAAGACGCCGGGTGATCACGGACGAAAAGAA < 1:408977/98‑1 GATCTGCCCGGGTTCAAGTATGATGCTCAAGCGCTCATCCTTCTTTTCGTCCGTGATCACCCGGCGACAAGACGCCGGGTGATCACGGACGAAAAGAA > 2:408977/1‑98 TTCAAGTATGATGCTCAAGCGCTCATCCTTCTTTTCGTCCGTGATCACCCGGCGACAAGACGCCGGGTGATCA > 1:202787/1‑73 TTCAAGTATGATGCTCAAGCGCTCATCCTTCTTTTCGTCCGTGATCACCCGGCGACAAGACGCCGGGTGATCA < 2:202787/73‑1 GCCGGGTGATCACGGACGAAAAGAAGGATGAGCGCTTGAGCATCATACTTGAACCCGGGCAGATCGAAGCGTCGGCAGTCACGCCGCCATTTCTGCACCTGCCCGCCGCCAACCTGTTTGAACTGCGTGCCGCGCGCCTGGAGCAACTGG < 1:483165/150‑1 GCCGGGTGATCACGGACGAAAAGAAGGATGAGCGCTTGAGCATCATACTTGAACCCGGGCAGATCGAAGCGTCGGCAGTCACGCCGCCATTTCTGCACCTGCCCGCCGCCAACCTGTTTGAACTGCGTGCCGCGCGCCTGGAGCAACTGG > 2:624708/1‑150 GCCGGGTGATCACGGACGAAAAGAAGGATGAGCGCTTGAGCATCATACTTGAACCCGGGCAGATCGAAGCGTCGGCAGTCACGCCGCCATTTCTGCACCTGCCCGCCGCCAACCTGTTTGAACTGCGTGCCGCGCGCCTGGAGCAACTGG > 2:827146/1‑150 GCCGGGTGATCACGGACGAAAAGAAGGATGAGCGCTTGAGCATCATACTTGAACCCGGGCAGATCGAAGCGTCGGCAGTCACGCCGCCATTTCTGCACCTGCCCGCCGCCAACCTGTT < 1:811254/118‑1 GCCGGGTGATCACGGACGAAAAGAAGGATGAGCGCTTGAGCATCATACTTGAACCCGGGCAGATCGAAGCGTCGGCAGTCACGCCGCCATTTCTGCACCTGCCCGCCGCCAACCTGTT > 2:811254/1‑118 GGGTGATCACGGACGAAAAGAAGGATGAGCGCTTGAGCATCATACTTGAACCCGGGCAGATCGAAGCGTCGGCAGTCACGCCGCCATTTCTGCACCTGCCCGCCGCCAACCTGTTTGAACTGCGTGCCGCGCGCCTGGAGCAACTGGCAG > 1:1114825/1‑150 GGGTGATCACGGACGAAAAGAAGGATGAGCGCTTGAGCATCATACTTGAACCCGGGCAGATCGAAGCGTCGGCAGTCACGCCGCCATTTCTGCACCTGCCCGCCGCCAACCTGTTTGAACTGCGTGCCGCGCGCCTGGAGCAACTGGCAG > 2:569399/1‑150 GGTGATCACGGACGAAAAGAAGGATGAGCGCTTGAGCATCATACTTGAACCCGGGCAGATCGAAGCGTCGGCAGTCACGCCGCCATTTCTGCACCTGCCCGCCGCCAACCTGTTTGAACTGCGTGCCGCGCGCCTGGAGCAACTGGCAGA > 1:148770/1‑150 TCCAGGCGCGCGGCACGCAGTTCAAACAGGTTGGCGGCGGGCAGGTGCAGAAATGGCGGCGTGACTGCCGACGCTTCGATCTGCCCGGGTTCAAGTATGATGCTCAAGCGCTCATCCTTCTTTTCGTCCGTGATCACCCGGCGTCTTGTCGCCGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/579749‑579595 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgccggGTGATCACGGACGAAAAGAAGGATGAGCGCTTGAGCATCATACTTGAACCCGGGCAGATCGAAGCGTCGGCAGTCACGCCGCCATTTCTGCACCTGCCCGCCGCCAACCTGTTTGAACTGCGTGCCGCGCGCCTGGAGCAACTGGCAGA > NC_002947/579613‑579761 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |