| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 611507 = | NA (NA) | 8 (0.170) | 8/236 | NT | NA | coding (401/966 nt) | PP_0526 | transposase |
| ? | NC_002947 | 611536 = | NA (NA) | coding (430/966 nt) | PP_0526 | transposase | |||||
CCCCGCCTTCTTGATCACCGCACGCAGCTGTTTTTCCAGCGAAAGCTCTATGCGTTCGAGCACTTCCTCAACACGTTTGAGTTCTGAGGCAAACAATTTGTCGCCCGACAAGCTCATCCGCAGCATGCCGCGCACTGCTACAAGTTTGGCGCGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/611661‑611507‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcgcggcATGCTGCGGATGAGCTTGTCGGGCGACAAATTGTTTGCCTCAGAACTCAAACGTGTTGAGGAAGTGCTCGAACGCATAGAGCTTTCGCTGGAAAAACAGCTGCGTGCGGTGATCAAGAAGGCGGGGCTTTCCGATCAGATGCGCCGTGT > NC_002947/611536‑611684 CCCCGCCTTCTTGATCACCTCACTCAGCTGGTTTTCCAGCGAAAGCTCTATGCGTTCGAGCACTTTGGTGACTCGTTTGAGTTCTGAGGCAAACAATTTGTCGCCCGACAAGCTCATCCGCAGCATGCCGCGCACTGCTACAAGTTTGGC < 1:1043123/150‑1CCCCGCCTTCTTGATCACCGCACGCAGCTGTTTTTCCAGCGAAAGCTCTATGCGTTCGAGCACTTCCTCAACACGTTTGAGTTCTGAGGCAAACAATTTGTCGCCCGACAAGCTCATCCGCAGCATGCCGCGCACTGCTACAAGTTTGGC < 2:245125/150‑1CCCCGCCTTCTTGATCACCGCACGCAGCTGTTTTTCCAGCGAAAGCTCTATGCGTTCGAGCACTTCCTCAACACGTTTGAGTTCTGAGGCAAACAATTTGTCGCCCGACAAGCTCATCCGCAGCATGCCGCGCACTGCTACAAGTTTGGC > 1:134356/1‑150CCCCGCCTTCTTGATCAACGCACGCAGCTGTTTTTCCAGCTAAAGCTCTATGCGTTCGAGCACTTCCTCAACACGTTTGAGTTCTGAGGCAAACAATTTGTCGCCCGACAAGCTCATCCGCAGCATGCCGCGCACTGCTACAAGTTTGGC > 2:185619/1‑150 CCCGCCTTCTTGATCACCGCACGCAGCTGTTTTTCCAGCGAAAGCTCTATGCGTTCGAGCACTTCCTCAACACGTTTGAGTTCTGAGGCAAACAATTTGTCGCCCGACAAGCTCATCCGCAGCATGCCGCGCACTGCTACAAGTTTGGCG > 2:673090/1‑150 CGCCTTCTTGATCACCGCACGCAGCTGTTTTTCCAGCGAAAGCTCTATGCGTTCGAGCACTTCCTCAACACGTTTGAGTTCTGAGGCAAACAATTTGTCGCCCGACAAGCTCATCCGCAGCATGCCGCGCACTGCTCCAAGTTTGGCGCG > 2:847356/1‑150 TTTTTCCAGCGAAAGCTCTATGCGTTCGAGCACTTCCTCAACACGTTTGAGTTCTGAGGCAAACAATTTGTCGCCCGACAAGCTCATCCGCAGCATGCCGCGCACTGCTACAAGTTTGGCG < 1:558191/121‑1 TTTTTCCAGCGAAAGCTCTATGCGTTCGAGCACTTCCTCAACACGTTTGAGTTCTGAGGCAAACAATTTGTCGCCCGACAAGCTCATCCGCAGCATGCCGCGCACTGCTACAAGTTTGGCG > 2:558191/1‑121 AAAGCTCTATGCGTTCGAGCACTTCCTCAACACGTTTGAGTTCTGAGGCAAACAATTTGTCGCCCGACAAGCTCATCCGCAGCATGCCGCGCACTGCTACAAGTTTGGCGC < 2:705259/111‑1 AAAGCTCTATGCGTTCGAGCACTTCCTCAACACGTTTGAGTTCTGAGGCAAACAATTTGTCGCCCGACAAGCTCATCCGCAGCATGCCGCGCACTGCTACAAGTTTGGCGC > 1:705259/1‑111 AAAGCTCTATGCGTTCGAGCACTTCCTCAACACGTTTGAGTTCTGAGGCAAACAATTTGTCGCCCGACAAGCTCATCCGCAGCATGCCGCGCACTGCTACAAGTTTGG < 1:527727/108‑1 AAAGCTCTATGCGTTCGAGCACTTCCTCAACACGTTTGAGTTCTGAGGCAAACAATTTGTCGCCCGACAAGCTCATCCGCAGCATGCCGCGCACTGCTACAAGTTTGG > 2:527727/1‑108 AACAATTTGTCGCCCGACAAGCTCATCCGCAGCATGCCGCGCACTGCTACAAGTTTGGC > 1:914708/1‑59 AACAATTTGTCGCCCGACAAGCTCATCCGCAGCATGCCGCGCACTGCTACAAGTTTGGC < 2:914708/59‑1 TCCGCAGCATGCCGCGCACTGCTACAAGTTTGGCGCGGCATGCTGCGGATGAGCTTGTCGGGCGACAAATTGTTTGCCTCAGAACTCAAACGTGTTGAGGAAGTGC < 2:746288/106‑1 TCCGCAGCATGCCGCGCACTGCTACAAGTTTGGCGCGGCATGCTGCGGATGAGCTTGTCGGGCGACAAATTGTTTGCCTCAGAACTCAAACGTGTTGAGGAAGTGC > 1:746288/1‑106 ATGCCGCGCACTGCTACAAGTTTGGCGCGGCATGCTGCGGATGAGCTTGTCGGGCGACAAATTGTTTGCCTCAGAACTCAAACGTGTTGAGGAAGTGCTCGAACGCATAGAGCTTTCGCTGGAAAAACAGCTGCGTGCGG > 1:613226/1‑140 ATGCCGCGCACTGCTACAAGTTTGGCGCGGCATGCTGCGGATGAGCTTGTCGGGCGACAAATTGTTTGCCTCAGAACTCAAACGTGTTGAGGAAGTGCTCGAACGCATAGAGCTTTCGCTGGAAAAACAGCTGCGTGCGG < 2:613226/140‑1 TGCCGCGCACTGCTACAAGTTTGGCGCGGCATGCTGCGGATGAGCTTGTCGGGCGACAAATTGTTTGCCTCAGAACTCAAACGTGTTGAGGAAGTGCTCGAACGCATA < 1:439033/108‑1 TGCCGCGCACTGCTACAAGTTTGGCGCGGCATGCTGCGGATGAGCTTGTCGGGCGACAAATTGTTTGCCTCAGAACTCAAACGTGTTGAGGAAGTGCTCGAACGCATA > 2:439033/1‑108 GCCGCGCACTGCTACAAGTTTGGCGCGGCATGCTGCGGATGAGCTTGTCGGGCGACAAATTGTTTGCCTCAGAACTCAAACGTGTTGAGGAAGTGCTCGAACGCATAGAGCTTTCGCTGGAAAAACAGCTGCGTGCGGTGATCAA < 1:1064739/145‑1 GCCGCGCACTGCTACAAGTTTGGCGCGGCATGCTGCGGATGAGCTTGTCGGGCGACAAATTGTTTGCCTCAGAACTCAAACGTGTTGAGGAAGTGCTCGAACGCATAGAGCTTTCGCTGGAAAAACAGCTGCGTGCGGTGATCAA > 2:1064739/1‑145 GCGCGGCATGCTGCGGATGAGCTTGTCGGGCGACAAATTGTTTGCCTCAGAACTCAAACGTGTTGAGGAAGTGCTCGAACGCATAGAGCTTTCGCTGGAAAAACAGCTGCGTGCGGTGATCAAGAAGGCGGGGCTTTCCGATCAGATGCG > 1:4825/1‑150 CGCGGCATGCTGCGGATGAGCTTGTCGGGCGACAAATTGTTTGCCTCAGAACTCAAACGTGTTGAGGAAGTGCTCGAACGCATAGAGCTTTCGCTGGAAAAACAGCTGCGTGCGGTGATCAAGAAGGCGGGGCTTTCCGATCAGATGCGC < 1:1206249/150‑1 GCGGCATGCTGCGGATGAGCTTGTCGGGCGACAAATTGTTTGCCTCAGAACTCAAACGTGTTGAGGAAGTGCTCGAACGCATAGAGCTTTCGCTGGAAAAACAGCTGCGTGCGGTGATCAAGAAGGCGGGGCTTTCCGATCAGATGCGCC > 2:305086/1‑150 GCGGCATGCTGCGGATGAGCTTGTCGGGCGACAAATTGTTTGCCTCAGAACTCAAACGTGTTGAGGAAGTGCTCGAACGCATAGAGCTTTCGCTGGAAAAACAGCTGCGTGCGGTGATCAAGAAGGCGGGGCTTTCCGATCAGATGCGCC > 1:889389/1‑150 GCGGCATGCTGCGGATGAGCTTGTCGGGCGACAAATTGTTTGCCTCAGAACTCAAACGTGTTGAGGAAGTGCTCGAACGCATAGAGCTTTCGCTGGAAAAACAGCTGCGTGCGGTGATCAAGAAGGCGGGGCTTTCCGATCAGATGCGCC > 1:736638/1‑150 GCGGCATGCTGCGGATGAGCTTGTCGGGCGACAAATTGTTTGCCTCAGAACTCAAACGTGTTGAGGAAGTGCTCGAACGCATAGAGCTTTCGCTGGAAAAACAGCTGCGTGCGGTGATCAAGAAGGCGGGGCTTTCCGATCAGATGCGCC < 1:1168104/150‑1 GGCATGCTGCGGATGAGCTTGTCGGGCGACAAATTGTTTGCCTCAGAACTCAAACGTGTTGAGGAAGTGCTCGAA < 2:474789/75‑1 GGCATGCTGCGGATGAGCTTGTCGGGCGACAAATTGTTTGCCTCAGAACTCAAACGTGTTGAGGAAGTGCTCGAA > 1:474789/1‑75 CATGCTGCGGATGAGCTTGTCGGGCGACAAATTGTTTGCCTCAGAACTCAAATGTGTTGAGGAAGTGCTCGAACGCATAGAGCTTTCGCTGGAAAAACAGCTGCGTGCGGTGATCAAGAAGGCGGGGCTTTCCGATCAGATGCGCCGTGT > 2:1145236/1‑150 CATGCTGCGGATGAGCTTGTCGGGCGACAAATTGTTTGCCTCAGAACTCAAACGTGTTGAGGAAGTGCTCGAACGCATAGAGCTTTCGCTGGAAAAACAGCTGCGTGCGGTGATCAAGAAGGCGGGGCTTTCCGATCAGA > 2:598246/1‑140 CATGCTGCGGATGAGCTTGTCGGGCGACAAATTGTTTGCCTCAGAACTCAAACGTGTTGAGGAAGTGCTCGAACGCATAGAGCTTTCGCTGGAAAAACAGCTGCGTGCGGTGATCAAGAAGGCGGGGCTTTCCGATCAGA < 1:598246/140‑1 CATGCTGCGGATGAGCTTGTCGGGCGACAAATTGTTTGCCTCAGAACTCAAACGTGTTGAGGAAGTGCTCGAACGCATAGAGCTCTCGCTCGAAAAACTACTGCGTGCGTTGATCAAGAAGGCGGGGCTTTCCGATCAGATGCGCCGTGT < 1:989565/150‑1 CCCCGCCTTCTTGATCACCGCACGCAGCTGTTTTTCCAGCGAAAGCTCTATGCGTTCGAGCACTTCCTCAACACGTTTGAGTTCTGAGGCAAACAATTTGTCGCCCGACAAGCTCATCCGCAGCATGCCGCGCACTGCTACAAGTTTGGCGCGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/611661‑611507‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcgcggcATGCTGCGGATGAGCTTGTCGGGCGACAAATTGTTTGCCTCAGAACTCAAACGTGTTGAGGAAGTGCTCGAACGCATAGAGCTTTCGCTGGAAAAACAGCTGCGTGCGGTGATCAAGAAGGCGGGGCTTTCCGATCAGATGCGCCGTGT > NC_002947/611536‑611684 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |