| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 1126598 = | 57 (1.160) | 7 (0.170) | 5/208 | NT | 13.4% | intergenic (‑47/+103) | tdcG‑II/gcvP‑I | L‑serine dehydratase/glycine dehydrogenase |
| ? | NC_002947 | 1126656 = | 43 (1.050) | intergenic (‑105/+45) | tdcG‑II/gcvP‑I | L‑serine dehydratase/glycine dehydrogenase | |||||
GGCGACCGCAACCTGGTGTGCGCCTGCCCGTCGATCGAGAGCTATCAGGACGCCTGATAGCCCTCCCCGCCACCTGGCTTGGGTGGCGGGCTCTGTGTAGGAGCGGGTTTACCCGCGAATGCGATGGTGGCTATACCTCCGCATTCGCGGGTAAACCCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1126757‑1126598‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgcattcgcgggtaaacccgcTCCTACACAGAGC‑C‑CG‑CCACCCAAGCCAGGTGGCGGGGAGGGCTATCAGGCGTCCTGATAGCTCTCGATCGACGGGCAGGCGCACACCAGGTTGCGGTCGCCGAACACGTTGTCGACCCGGCCGACCGGCGGCCAGTACTTGCCTTCCA > NC_002947/1126656‑1126804 GGCGACCGCAACCTGGTGTGCGCCTGCCCGTCGATCGAGAGCTATCAGGCCCCCGGATAGCCCTCCCCGCCACCTGGCTTGGGTGGCGGGCTCTGTGTAGGAGCGGGTTTACCCGCGAATGCGATGGTGGCTATACCTCCGCATTCGCGG < 2:998042/150‑1GGCGACCGCAACCTGGTGTGCGCCTGCCCGTCGATCGAGAGCTATCAGGACGCCTGATAGCCCTCCCCGCCACCTGGCTTGGGTGGCGGGCTCTGTGTAGGAGCGGGTTTACCCGCGAATGCGATGGTGGCTATACCTCCGCATTCGCGG < 2:52905/150‑1 GCGACCGCAACCTGGTGTGCGCCTGCCCGTCGATCGAGAGCTATCAGGACGCCTGATAGCCCTCCCCGCCACCTGGCTTGGGTGGCGGGCTCTGTGTAGGAGCGGGTTTACCCGCGAATGCGATGGTGGCTATACCTCCGCATTCGCGGG > 2:380012/1‑150 CAACCTGGTGTGCGCCTGCCCGTCGATCGAGAGCTATCAGGACGCCTGATAGCCCTCCCCGCCACCTGGCTTGGGTGGCGGGCTCTGTGTAGGAGCGGGTTTACCCGCGAATGCGATGGTGGCTATACCTCCGCATTCGCGGGTAAACCC < 1:771920/150‑1 GTGTGCGCCTGCCCGTCGATCGAGAGCTATCAGGACGCCTGATAGCCCTCCCCGCCACCTGGCTTGGGTGGCGGGCTCTGAGTAGGAGCGGGTTTACCCGCGAATGCGATGGTGGCTATACCTCCGCATTCGCGGGTAAACCCGC < 1:1174260/145‑1 GTGTGCGCCTGCCCGTCGATCGAGAGCTATCAGGACGCCTGATAGCCCTCCCCGCCACCTGGCTTGGGTGGCGGGCTCTGAGTAGGAGCGGGTTTACCCGCGAATGCGATGGTGGCTATACCTCCGCATTCGCGGGTAAACCCGC > 2:1174260/1‑145 GGGTGGCGGGCTCTGTGTAGGAGCGGGTTTACCCGCGAATGCGATGGTGGCTATACCTCCGCATTCGCGGG > 1:601873/1‑71 GGGTGGCGGGCTCTGTGTAGGAGCGGGTTTACCCGCGAATGCGATGGTGGCTATACCTCCGCATTCGCGGG < 2:601873/71‑1 CCGCGAATGCGATGGTGGCTATACCTCCGCATTCGCGGGTAAACCCGCTCCTACACAGAGC‑C‑CG‑CCACCCAAGCCAGGTGGCGGGGA < 2:1206986/87‑1 CCGCGAATGCGATGGTGGCTATACCTCCGCATTCGCGGGTAAACCCGCTCCTACACAGAGC‑C‑CG‑CCACCCAAGCCAGGTGGCGGGGA > 1:1206986/1‑87 CCGCGAATGCGATGGTGGCTATACCTCCGCATTCGCGGGTAAACCCGCTCCTACACAGAGC‑C‑CG‑CCACCCAAGC < 2:916705/74‑1 CCGCGAATGCGATGGTGGCTATACCTCCGCATTCGCGGGTAAACCCGCTCCTACACAGAGC‑C‑CG‑CCACCCAAGC > 1:916705/1‑74 CCGCGAATGCGATGGTGGCTATACCTCCGCATTCGCGGGTAAACCCGCGCCTACAGGGCTC‑AATGTCCACCCAAGCCAGGTGGCGGGGAGGGCTATCAGGCGTCCTGATAGCTCTCGATCGACGGGCAGGCGCACACCAGGTTGCGG < 2:1161950/147‑1 CCGCGAATGCGATGGTGGCGATACCTCCGCATTCGCGGGTAAACCCGCGCCTACAGGGCTCAA‑TGTCCACCCAAGCCAGGTGGCGGGGAGGGCTATCAGGCGTCCTGATAGCTCTCGATCGACGGGCAGGCGCACACCAGGTTGCGG > 1:1161950/1‑147 GCGAATGCGATGGTGGCTATACCTCCGCATTCGCGGGTAAACCCGCTCCTACACAGAGC‑C‑CG‑CCACCCAAGCCAGGTGGCGGGGAGGGCTATCAGGCGTCCTGATAGCTCTCGATCGACGGGCAGGCGCACACCAGGTTGCGGTCGCCGA > 2:394080/1‑150 GCGGGTAAACCCGCTCCTACACAGAGC‑C‑CG‑CCACCCAAGCCAGGTGGCGGGGAGGGCTATCAGGCGTCCTGATAGCTCTCGATCGACGGGCAGGCGCACACCAGGTTGCGGTCGCCGAACACGTTGTCGACCCGGCCGACCGGCGGCCAG > 1:406264/1‑150 TAAACCCGCTCCTACACAGAGC‑C‑CG‑CCACCCAAGCCAGGTGGCGGGGAGGGCTATCAGGCGTCCTGATAGCTCTCGATCGACGGGCAGGCGCACACCAGGTTGCGGTCGCCGAACACGTTGTCGACCCGGCCGACCGGCGGCCAGTACTT < 1:296933/150‑1 AACCCGCTCCTACACAGAGC‑C‑CG‑CCACCCAAGCCAGGTGGCGGGGAGGGCTATCAGGCGTCCTGATAGCTCTCGATCGACGGGCAGGCGCACACCAGGTTGCGGTCGCCGAACACGTTGTCGACCCGGCCGACCGGCGGCCAGTACTTGC < 2:385828/150‑1 AACCCGCTCCTACACAGAGC‑C‑CG‑CCACCCAAGCCAGGTGGCGGGGAGGGCTATCAGGCGTCCTGATAGCTCTCGATCGACGGGCAGGCGCACACCAGGTTGCGGTCGCCGAACACGTTGTCGACCCGGCCGACCGGCGGCCAGTACTTGC < 2:985353/150‑1 ACCCGCTCCTACACAGAGC‑C‑CG‑CCACCCAAGCCAGGTGGCGGGGAGGGCTATCAGGCGTCCTGATAGCTCTCGATCGACGGGCAGGCGCACACCAGGTTGCGGTCGCCGAACACGTTGTCGACCCGGCCGACCGGCGGCCAGTACTTGCC > 2:543975/1‑150 CCCGCTCCTACACAGAGC‑C‑CG‑CCACCCAAGCCAGGTGGCGGGGAGGGCTATCAGGCGTCCTGATAGCTCTCGATCGACGGGCAGGCGCACACCAGGTTGCGGTCGCCGAACACGTTGTCGACCCGGCCGACCGGCGGCCAGTACTTGCCT > 1:1258766/1‑150 CCCGCTCCTACACAGAGC‑C‑CG‑CCACCCAAGCCAGGTGGCGGGGAGGGCTATCAGGCGTCCTGATAGCTCTCGATCGACGGGCAGGCGCACACCAGGTTGCGGTCGCCGAACACGTTGTCGACCCGGCCGACCGGCGGCCAGTACTTGCCT < 1:394080/150‑1 GCTCCTACACAGAGC‑C‑CG‑CCACCCAAGCCAGGTGGCGGGGAGGGCTATCAGGCGTCCTGATAGCTCTCGATCGACGGGCAGGCGCACACCAGGTTGCGGTCGCCGAACACGTTGTCGACCCGGCCGACCGGCGGCCAGTACTTGCCTTCC > 2:827752/1‑150 CTCCTACACAGAGC‑C‑CG‑CCACCCAAGCCAGGTGGCGGGGAGGGCTATCAGGCGTCCTGATAGCTCTCGATCGACGGGCAGGCGCACACCAGGTTGCGGTCGCCGAACACGTTGTCGACCCGGCCGACCGGCGGCCAGTACTTGCCTTCCA < 2:771920/150‑1 GGCGACCGCAACCTGGTGTGCGCCTGCCCGTCGATCGAGAGCTATCAGGACGCCTGATAGCCCTCCCCGCCACCTGGCTTGGGTGGCGGGCTCTGTGTAGGAGCGGGTTTACCCGCGAATGCGATGGTGGCTATACCTCCGCATTCGCGGGTAAACCCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1126757‑1126598‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgcattcgcgggtaaacccgcTCCTACACAGAGC‑C‑CG‑CCACCCAAGCCAGGTGGCGGGGAGGGCTATCAGGCGTCCTGATAGCTCTCGATCGACGGGCAGGCGCACACCAGGTTGCGGTCGCCGAACACGTTGTCGACCCGGCCGACCGGCGGCCAGTACTTGCCTTCCA > NC_002947/1126656‑1126804 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |