| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 2429960 | 24 (0.490) | 6 (0.170) | 6/184 | NT | 22.8% | intergenic (+47/+66) | PP_2129/PP_2130 | hypothetical protein/lytic transglycosylase |
| ? | NC_002947 | = 2429975 | 23 (0.640) | intergenic (+62/+51) | PP_2129/PP_2130 | hypothetical protein/lytic transglycosylase | |||||
CCGTGAGCCGATGGCTACGCTGAAGACTTTCCGCGAAAAAGAAGGCGACGTGCTGTTCGGCCAGAACCTGGCTGTGGATGGCAGTGGGTGGCTGGAGGTGGGGATGGAAGTAGAAATCCTGGAATAGGTGTGTTGCCTGTGCCGGCCTCTTCGCGGGTGAACCCGCTCCTACAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/2429787‑2429960‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccggcctcttcgcgggtgaacccgctcctacaaGGGTTTGAGCGGTCGTTGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCACAGGCAACACACCTATTCCAGGATTTCTACTTCCATCCCCACCTCCAGCCACCCACTGCCATCCACAGCCAGGTTCTGGCCGAACAGCACGTCGCCTT < NC_002947/2429975‑2429828 CCGTGAGCCGATGGCTACGCTGAAGACTTTCCGCGAAAAAGAAGGCGACGTGCTGTTCGGCCAGAACCTGGCTGTGGATGGCAGTGGGTGGCTGGAGGTGGGGATGGAAGTAGAAATCCTGGAATAGGTGTGTTGCCTGTGCCGGCCTCT > 1:1166793/1‑150 GCCGATGGCTACGCTGAAGACTTTCCGCGAAAAAGAAGGCGACGTGCTGTTCGGCCAGAACCTGGCTGTGGATGGCAGTGGGTGGCTGGAGGTGGGGATGGAAGTAGAAATCCTGGAATAGGTGTGTTGCCTGTGCCGGCCTCTTCGCGG < 2:452083/150‑1 GCTACGCTGAAGACTTTCCGCGAAAAAGAAGGCGACGTGCTGTTCGGCCAGAACCTGGCTGTGGATGGCAGTGGGTGGCTGGAGGTGGGGATGGAAGTAGAAATCCTGGAATAGGTGTGTTGCCTGTGCCGGCCTCTTCGCGGGTGAACC > 1:986698/1‑150 CGCTGAAGACTTTCCGCGAAAAAGAAGGCGACGTGCTGTTCGGCCAGAACCTGGCTGTGGATGGCAGTGGGTGGCTGGAGGTGGGGATGGAAGTAGAAATCCTGGAATAGGTGTGTTGCCTGTGCCGGCCTCTTCGCGGGTGAACCCGCT > 1:30775/1‑150 TGAAGACTTTCCGCGAAAAAGAAGGCGACGTGCTGTTCGGCCAGAACCTGGCTGTGGATGGCAGTGGGTGGCTGGAGGTGGGGATGGAAGTAGAAATCCTGGAATAGGTGTGTTGCCTGTGCCGGCCTCTTCGCGGGTGAACCCGCTCCT > 1:747430/1‑150 GAAGACTTTCCGCGAAAAAGAAGGCGACGTGCTGTTCGGCCAGAACCTGGCTGTGGATGGCAGTGGGTGGCTGGAGGTGGGGATGGAAGTAGAAATCCTGGAATAGGTGTGTTGCCTGTGCCGGCCTCTTCGCGGGTGAACCCGCTCCTA < 2:747430/150‑1 GAAAAAGAAGGCGACGTGCTGTTCGGCCAGAACCTGGCTGTGGATGGCAGTGGGTGGCTGGAGGTGGGGATGGAAGTAGAAATCCTGGAATAGGTGTGTTGCCTGTGCCGGCCTCTTCGCGG > 2:712125/1‑122 GAAAAAGAAGGCGACGTGCTGTTCGGCCAGAACCTGGCTGTGGATGGCAGTGGGTGGCTGGAGGTGGGGATGGAAGTAGAAATCCTGGAATAGGTGTGTTGCCTGTGCCGGCCTCTTCGCGG < 1:712125/122‑1 AAGAAGGCGACGTGCTGTTCGGCCAGAACCTGGCTGTGGATGGCAGTGGGTGGCTGGAGGTGGGGATGGAAGTAGAAATCCTGGAATAGGTGTGTTGCCTGTGCCGGCCTCTTCGCGG < 2:621337/118‑1 AAGAAGGCGACGTGCTGTTCGGCCAGAACCTGGCTGTGGATGGCAGTGGGTGGCTGGAGGTGGGGATGGAAGTAGAAATCCTGGAATAGGTGTGTTGCCTGTGCCGGCCTCTTCGCGG > 1:621337/1‑118 CTGTTCGGCCAGAACCTGGCTGTGGATGGCAGTGGGTGGCTGGAGGTGGGGATGGAAGTAGAAATCCTGGAATAGGTGTGTTGCCTGTGCCGGCCTCTTCGCGGGTGAACCCGCTCCTACAAGGGTTTGAGCGGTCGTTGTAGGAGCGGG < 2:243800/150‑1 GGCCAGAACCTGGCTGTGGATGGCAGTGGGTGGCTGGAGGTGGGGATGGAAGTAGAAATCCTGGAATAGGTGTGTTGCCTGTGCCGGCCTCTTCGCGGGTGAACCCGCTCCT < 1:1019392/112‑1 GGCCAGAACCTGGCTGTGGATGGCAGTGGGTGGCTGGAGGTGGGGATGGAAGTAGAAATCCTGGAATAGGTGTGTTGCCTGTGCCGGCCTCTTCGCGGGTGAACCCGCTCCT > 2:1019392/1‑112 CTGTGGATGGCAGTGGGTGGCTGGAGGTGGGGATGGAAGTAGAAATCCTGGAATAGGTGTGTTGCCTGTGCCGGCCTCTTCGCGGGTGAACCCGCTCCTACAAGGGTTTGAGCGGTCGTTGTAGGAGCGGGTTCACCCGCGAAGAGGCCG < 2:986698/150‑1 TGGAGGTGGGGATGGAAGTAGAAATCCTGGAATAGGTGTGTTGCCTGTGCCGGCCTCTTCGCGGGTGAACCCGCTCCTACAAGGGTTTGAGCGGTCGTTGTAGGAGCG < 1:392851/108‑1 TGGAGGTGGGGATGGAAGTAGAAATCCTGGAATAGGTGTGTTGCCTGTGCCGGCCTCTTCGCGGGTGAACCCGCTCCTACAAGGGTTTGAGCGGTCGTTGTAGGAGCG > 2:392851/1‑108 GAATAGGTGTGTTGCCTGTGCCGGCCTCTTCGCGGGTGAACCCGCTCCTACAAGGGTTTGAGCGGTCGTTGTAGGAGC > 1:383202/1‑78 GAATAGGTGTGTTGCCTGTGCCGGCCTCTTCGCGGGTGAACCCGCTCCTACAAGGGTTTGAGCGGTCGTTGTAGGAGC < 2:383202/78‑1 GGCCTCTTCGCGGGTGAACCCGCTCCTACAAGGGTTTGAGCGGTCGTTGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCACAGGCAACCCACCTATTCCAGGATTTCTACTTCCATCCCCACCTCCAGCCACCCACTGCCATCCACAcc > 2:560342/1‑148 GGCCTCTTCGCGGGTGAACCCGCTCCTACAAGGGTTTGAGCGGTCGTTGTAGCAGCGGGTTCCCCCGCGCAGAGGCCGGCACCGGCAACACACCTATTCCACGATTTCTACTTCCATCCCCCCCTCCCGCCTCCCCCTGCCATCCACccc > 2:560347/1‑147 GCCTCTTCGCGGGTGAACCCGCTCCTACAAGGGTTTGAGCGGTCGTTGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCACAGGCAACACACCTATTCCAGGATTTCTACTTCCATCCCCACCTCCAGCCACCCACTGCCATCCACAGCC > 1:1114596/1‑150 GCCTCTTCGCGGGTGAACCCGCTCCTACAAGGGTTTGAGCGGTCGTTGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCACAGGCAACACACCTATTCCAGGATTTCTACTTCCATCCCCACCTCCAGCCACCCACTGCCATCCACAGCC > 2:1221592/1‑150 CCTCTTCGCGGGTGAACCCGCTCCTACAAGGGTTTGAGCGGTCGTTGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCACAGGCAACACACCTATTCCAGGATTTCTACTTCCATCCCCACCTCCAGCCACCCACTGCCATCCACAGCCA > 2:697309/1‑150 TCTTCGCGGGTGAACCCGCTCCTACAAGGGTTTGAGCGGTCGTTGTAGGAGCGGGTTCACCCGCGAA < 2:529171/67‑1 TCTTCGCGGGTGAACCCGCTCCTACAAGGGTTTGAGCGGTCGTTGTAGGAGCGGGTTCACCCGCGAA > 1:529171/1‑67 TTCGCGGGTGAACCCGCTCCTACAAGGGTTTGAGCGGTCGTTGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCACAGGCAACACACCTATTCCAGGATTTCTACTTCCATCCCCACCTCCAGC < 2:262153/124‑1 TTCGCGGGTGAACCCGCTCCTACAAGGGTTTGAGCGGTCGTTGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCACAGGCAACACACCTATTCCAGGATTTCTACTTCCATCCCCACCTCCAGC > 1:262153/1‑124 TCGCGGGTGAACCCGCTCCTACAAGGGTTTGAGCGGTCGTTGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCACAGGCAACACACCTATTCCAGGATTTCTACTTCCATCCCCACCTCCAGCCACCCACTGCCATCCACAGCCAGGTTC < 1:697309/150‑1 GCGGGTGAACCCGCTCCTACAAGGGTTTGAGCGGTCGTTGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCACAGGCAACACACCTATTCCAGGATTTCTACTTCCATCCCCACCTCCAGCCACCCACTGCCATCCACAGCCAGGTTCTG < 1:1221592/150‑1 TGAACCCGCTCCTACAAGGGTTTGAGCGGTCGTTGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCACAGGCAACACACCTATTCCAGGATTTCTACTTCCATCCCCACCTCCAGCCACCCACTGCCATCCACAGCCAGGTTCTGGCCGA > 2:20887/1‑150 GAACCCGCGCCTACAGGGGGTTGAGCGGTCGTTGTAGGAGCGGGTTCTCCCGCGAAGAGGCCGGCACAGGCAACACACCTATTCCAGGATTTCTACTTCCATCCCCACCTCCAGCCACCCACTGCCATCCACAGCCAGGTTCTGGCCGAA < 2:413949/150‑1 CCCGCTCCTACAAGGGTTTGAGCGGTCGTTGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCACAGGCAACACACCTATTCCAGGATTTCTACTTCCATCCCCACCTCCAGCCACCCACTGCCATCCACAGCCAGGTTCTGGCCGAAC < 2:73853/148‑1 CCCGCTCCTACAAGGGTTTGAGCGGTCGTTGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCACAGGCAACACACCTATTCCAGGATTTCTACTTCCATCCCCACCTCCAGCCACCCACTGCCATCCACAGCCAGGTTCTGGCCGAAC > 1:73853/1‑148 CCCGCTCCTACAAGGGTTTGAGCGGTCGTTGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCACAGGCAACACACCTATTCCAGGATTTCTACTTCCATCCCCACCTCCAGCCA < 2:993652/114‑1 CCCGCTCCTACAAGGGTTTGAGCGGTCGTTGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCACAGGCAACACACCTATTCCAGGATTTCTACTTCCATCCCCACCTCCAGCCA > 1:993652/1‑114 CCGCTCCTACAAGGGTTTGAGCGGTCGTTGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCACAGGCAACACACCTATTCCAGGATTTCTACTTCCATCCCCACCTCCAGCCACCCACTGCCATCCACAGCCAGGTTCTGGCCGAACAGC > 2:1166793/1‑150 ACAAGGGTTTGAGCGGTCGTTGTAGGAGCGGGTTCACCCGCGAAGAGGCCGG < 1:206282/52‑1 ACAAGGGTTTGAGCGGTCGTTGTAGGAGCGGGTTCACCCGCGAAGAGGCCGG > 2:206282/1‑52 AAGGGTTTGAGCGGTCGTTGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCACAGGCAACACACCTATTCCAGGATTTCTACTTCCATCCCCACCTCCAGCCACCCACTGCCATCCACAGCCAGGTTCTGGCCGAACAGCACGTCGCCTT < 1:145742/150‑1 AAGGGTTTGAGCGGTCGTTGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCACAGGCAACACACCTATTCCAGGATTTCTACTTCCATCCCCACCTCCAGCCACCCACTGCCATCCACAGCCAGGTTCTGGCCGAACAGCACGTCGCCTT > 2:145742/1‑150 CCGTGAGCCGATGGCTACGCTGAAGACTTTCCGCGAAAAAGAAGGCGACGTGCTGTTCGGCCAGAACCTGGCTGTGGATGGCAGTGGGTGGCTGGAGGTGGGGATGGAAGTAGAAATCCTGGAATAGGTGTGTTGCCTGTGCCGGCCTCTTCGCGGGTGAACCCGCTCCTACAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/2429787‑2429960‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccggcctcttcgcgggtgaacccgctcctacaaGGGTTTGAGCGGTCGTTGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCACAGGCAACACACCTATTCCAGGATTTCTACTTCCATCCCCACCTCCAGCCACCCACTGCCATCCACAGCCAGGTTCTGGCCGAACAGCACGTCGCCTT < NC_002947/2429975‑2429828 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |