| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 2474161 = | 48 (0.980) | 10 (0.250) | 8/204 | NT | 24.6% | intergenic (‑23/+157) | PP_2167/tal | PhoD‑like phosphatase/transaldolase |
| ? | NC_002947 | 2474229 = | 22 (0.550) | intergenic (‑91/+89) | PP_2167/tal | PhoD‑like phosphatase/transaldolase | |||||
TGAAAAGGCCTGATACAGTTCGTGTTTGCCTGACGGGCGGGAAGTGTTCAGTATTTTCCGCCCGTTTTGTTTGCCACGCCTTAGTTGTGTATTGAATTCTCGGGCCTGTTCGCGGGCAAGCCCGCTCCTACACTGATCGATGTAAGGGCGGGCTTGCCCGCGAACAGGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2474330‑2474161‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcgggcttgcccgcgaacaggccCGAGAATTCAATACACAACTAAGGCGTGGCAAACAAAACGGGCGGAAAATACTGAACACTTCCCGCCCGTCAGGCAAACACGAACTGTATCAGGCCTTTTCAGCTATCAACTTCTCAAGCTTTTCCTGGTCCCGTGCAAACTGACGG > NC_002947/2474229‑2474375 TGAAAAGGCCTGATACAGTTCGTGTTTGCCTGACGGGCGGGAAGTGTTCAGTATTTTCCGCCCGTTTTGTTTGCCACGCCTTAGTTGTGTATTGAATTCTCGGGCCTGTTCGCGGGCAAGCCCGCTCCTACACTGATCGATGTAAGGGCG > 2:1034492/1‑150 GAAAAGGCCTGATACAGTTCGTGTTTGCCTGACGGGCGGGAAGTGTTCAGTATTTTCCGCCCGTTTTGTTTGCCACGCCTTAGTTGTGTATTGAATTCTCGGGCCTGTTCGCGGGCAAGCCCGCTCCTACACTGATCGATGTAAGGGCGG > 2:895579/1‑150 GAAAAGGCCTGATACAGTTCGTGTTTGCCTGACGGGCGGGAAGTGTTCAGTATTTTCCGCCCGTTTTGTTTGCCACGCCCTAGTTGTGTATTGAATTCTCGGGCCTGTTCGCGGGCAAGCCCGCTCCTACACTGATCGATGTAAGGGCGG > 1:569026/1‑150 AGGCCTGATACAGTTCGTGTTTGCCTGACGGGCGGGAAGTGTTCAGTATTTTCCGCCCGTTTTGTTTGCCACGCCTTAGTTGTGTATTGAATTCTCGGGCCTGTTCGCGGGCAAGCCCGCTCCTACACTGATCGATGTAAGGGCGGGCTT < 2:604168/150‑1 catcATACAGTTCTTGTTTGCCTGCCAGGCGGGAATTGTTCAGGATTTTCCGCCCGTTTTGTTTGCCACGCCTTAGTTGTGTATTGAATTCTCGGGCCTGTTCGCGGGCAAGCCCGCTCCTACACTGATCGATGTAAGGGCGGGCTTGCC < 1:208024/146‑1 CTGATACAGTTCGTGTTTGCCTGACGGGCGGGAAGTGTTCAGTATTTTCCGCCCGTTTTGTTTGCCACGCCCTAGTTGTGTATTGAATTCTCGGGCCTGTTCGCGGGCAAGCCCGCTCCTACACTGATCGATGTAAGGGCGGGCTTGCCC < 2:569026/150‑1 CTGATACAGTTCGTGTTTGCCTGACGGGCGGGAAGTGCTCAGTATTTTCCCCCCGTTTTGTTTGCCACGCCTTAGTTGTGTATTGAATTCCCGGGCCTGTTCGCGGGCAAGCCCGCTCCTACACTGATCGATGTAAGGGCGGGCTTGCCC > 2:45037/1‑150 GATACAGTTCGTGTTTGCCTGACGGGCGGGAAGTGTTCAGTATTTTCCGCCCGTTTTGTTTGCCACGCCTTAGTTGTGTATTGAATTCTCGGGCCTGTTCGCGGGCAAGCCCGCTCCTACACTGATCGATGTAAGGGCGGGCTTGCCCGC < 1:516608/150‑1 TACAGTTCGTGTTTGCCTGACGGGCGGGAAGTGTTCAGTATTTTCCGCCCGTTTTGTTTGCCACGCCTTAGTTGTGTATTGAATTCTCGGGCCTGTTCGCGGGCAAGCCCGCTCCTACACTGATCGATGTAAGGGCGGGCAAGCCCGCcc < 1:842198/150‑3 CAGTTCGTGTTTGCCTGACGGGCGGGAAGTGTTCAGTATTTTCCGCCCGTTTTGTTTGCCACGCCTTAGTTGTGTATTGAATTCTCGGGCCTGTTCGCGGGCAAGCCCGCTCCTACACTGATCGATGTAAGGGCGGGCTTGCCCGCGAAC < 2:765386/150‑1 CAGTATTTTCCGCCCGTTTTGTTTGCCACGCCTTAGTTGTGTATTGAATTCTCGGGCCTGTTCGCGGGCAAGCCCGCTCCTACACTGATCGATGTAAGGGCGGGCTT > 2:85614/1‑107 CAGTATTTTCCGCCCGTTTTGTTTGCCACGCCTTAGTTGTGTATTGAATTCTCGGGCCTGTTCGCGGGCAAGCCCGCTCCTACACTGATCGATGTAAGGGCGGGCTT < 1:85614/107‑1 AGTATTTTCCGCCCGTTTTGTTTGCCACGCCTTAGTTGTGTATTGAATTCTCGGGCCTGTTCGCGGGCAAGCCCGCTCCTACACTGATCGATGTAAGGGCGGGCTTGCCCGCGAACAGGCC > 2:1111342/1‑121 AGTATTTTCCGCCCGTTTTGTTTGCCACGCCTTAGTTGTGTATTGAATTCTCGGGCCTGTTCGCGGGCAAGCCCGCTCCTACACTGATCGATGTAAGGGCGGGCTTGCCCGCGAACAGGCC < 1:1111342/121‑1 CGTTTTGTTTGCCACGCCTTAGTTGTGTATTGAATTCTCGGGCCTGTTCGCGGGCAAGCCCGCTCCTACACTGATCGATGTAAGGGCGG < 1:1188549/89‑1 CGTTTTGTTTGCCACGCCTTAGTTGTGTATTGAATTCTCGGGCCTGTTCGCGGGCAAGCCCGCTCCTACACTGATCGATGTAAGGGCGG > 2:1188549/1‑89 CAAGCCCGCTCCTACACTGATCGATGTAAGGGCGGGCTTGCCCGCGAACAGGCCCGAGAATTCAATACACAACTAAGGCGTGGCAAACAAAACGGGCGGAAAATACTGAACACTTCCCGCCCGTCAGGCAAACACGAACTGTATCAGGCC > 1:1245936/1‑150 AAGCCCGCTCCTACACTGATCGATGTAAGGGCGGGCTTGCCCGCGAACAGGCCCGAGAATTCAATACACAACTAAGGCGTGGCAAACAAAACGGGCGGAAAATACTGAACACTTCCCGCCCGTCAGGCAAACACGAACTGTATCAGGCCT > 1:696205/1‑150 AAGCCCGCTCCTACACTGATCGATGTAAGGGCGGGCTTGCCCGCGAACAGGCCCGAGAATTCAATACACAACTAAGGCGTGGCAAACAAAACGGGCGGAAAATACTGAACACTTCCCGCCCGTCAGGCAAACACGAACTGTATCAGGCCT > 2:584411/1‑150 GCCCGCTCCTACACTGATCGATGTAAGGGCGGGCTTGCCCGCGAACAGGCCCGAGAATTCAATACACAACTAAGGCGTGGCAAACAAAACGGGCGGAAAATACTGAACACTTCCCGCCCGTCAGGCAAACACGAACTGTATCAGGCCTTT > 2:579493/1‑150 GCCCGCTCCTACACTGATCGATGTAAGGGCGGGCTTGCCCGCGAACAGGCCCGAGAATTCAATACACAACTAAGGCGTGGCAAACAAAACGGGCGGAAAATACTGAACACTTCCCGCCCGTCAGGCAAACACGAACTGTATCAGGCCTTT > 2:688871/1‑150 CCCGCTCCTACACTGATCGATGTAAGGGCTGGCTTGCCCGCGAACAGGCCCGAGAATTCAATACACAACTAAGGCGTGGCAAACAAAACGGGCGGAAAATACTGAACACTTCCCGCCCGTCAGGCAAACACGAACTGTATCAGGCCTTTT > 1:128330/1‑150 CCGCTCCTACACTGATCGATGTAAGGGCGGGCTTGCCCGCGAACAGGCCCGAGAATTCAATACACAACTAAGGCGTGGCAAACAAAACGGGCGGAAAATACTGAACACTTCCCGCCCGTCAGGCAAACACGAACTGTATCAGGC > 2:763807/1‑144 CCGCTCCTACACTGATCGATGTAAGGGCGGGCTTGCCCGCGAACAGGCCCGAGAATTCAATACACAACTAAGGCGTGGCAAACAAAACGGGCGGAAAATACTGAACACTTCCCGCCCGTCAGGCAAACACGAACTGTATCAGGC < 1:763807/144‑1 CACTGATCGATGTAAGGGCGGGCTTGCCCGCGAACAGGCCCGAGAATTCAATACACAACTAAGGCGTGGCAAACAAAACGGGCGGAAAATACTGAACACTTCCCGCCCGTCAGGCAAACACGAACTGTATCAGGCCTTTTCAGCTATCAA < 2:696205/150‑1 CGATGTAAGGGCGGGCTTGCCCGCGAACAGGCCCGAGAATTCAATACACAACTAAGGCGTGGCAAACAAAACGGGCGGAAAATACTGAACACTTCCCGCCCGTCAGGCAAACACGAACTGTATCAGGCCTTTTCAGCTATCAACTTCTCA < 1:584411/150‑1 CGGGCTTGCCCGCGAACAGGCCCGAGAATTCAATACACAACTAAGGCGTGGCAAACAAAACGGGCGGAAAATACTGAACACTTCCCGCCCGTCAGGCAAACACGAACTGTATCAGGCCTTTTCAGCTATCAACTTCTCAAGCTTTTCCTG < 1:579493/150‑1 GCTTGCCCGCGAACAGGCCCGAGAATTCAATACACAACTAAGGCGTGGCAAACAAAACGGGCGGAAAATACTGAACACTTCCCGCCCGTCAGGCAAACACGAACTGTATCAGGCCTTTTCAGCTATCAACTTCTCAAGCTTTTCCTGGTC < 1:604168/150‑1 GCCCGCGAACAGGCCCGAGAATTCAATACACAACTAAGGCGTGGCAAACAAAACGGGCGGAAAATACTGAACACTTCCCGCCCGTCAGGCAAACACGAACTGTATCAGGCCTTTTCAGCTATCAACTTCTCAAGCTTTTCCTGGTCCCGT < 2:516608/150‑1 ctggGAACAGGGCCGAGAAGTCAATAGACAACTAAGGCGGGGTAAACAAAACGGGCGGAAAATACTGAACACTTCCCGCCCGGCAGGCAAACACGAAATGTATCAGGCCTTTTCAGCTATCAACTTCTCAAGCTTTTCCTGGTCCCGTGC > 2:378041/5‑150 CCGCGAACAGGCCCGAGAATTCAATACACAACTAAGGCGTGGCAAACAAAACGGGCGGAAAATACTGAACACTTCCCGCCCGTCAGGCAAACACGAACTGTATCAGGCCTTTTCAGCTATCAACTTCTCAAGCTTTTCCTGGTCCCGTGC > 1:253505/1‑150 CCGCGAACAGGCCCGAGAATTCAATACACAACTAAGGCGTGGCAAACAAAACGGGCGGAAAATACTGAACACTTCCCGCCCGTCAGGCAAACACGAACTGTATCAGGCCTTTTCAGCTATCAACTTCTCAAGCTTTTCCTGGTCCCGTGC > 1:737855/1‑150 GCCCGAGAATTCAATACACAACTAAGGCGTGGCAAACAAAACGGGCGGAAAATACTGAACACTTCCCGCCCGTCAGGCAAACACGAACTGTATCAGGCCTTTTCAGCTATCAACTTCTCAAGCTTTTCCTGGTCCCGTGCAAACTGACGG > 2:278834/1‑150 TGAAAAGGCCTGATACAGTTCGTGTTTGCCTGACGGGCGGGAAGTGTTCAGTATTTTCCGCCCGTTTTGTTTGCCACGCCTTAGTTGTGTATTGAATTCTCGGGCCTGTTCGCGGGCAAGCCCGCTCCTACACTGATCGATGTAAGGGCGGGCTTGCCCGCGAACAGGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2474330‑2474161‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcgggcttgcccgcgaacaggccCGAGAATTCAATACACAACTAAGGCGTGGCAAACAAAACGGGCGGAAAATACTGAACACTTCCCGCCCGTCAGGCAAACACGAACTGTATCAGGCCTTTTCAGCTATCAACTTCTCAAGCTTTTCCTGGTCCCGTGCAAACTGACGG > NC_002947/2474229‑2474375 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |