New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 2681535 | 40 (0.820) | 5 (0.110) | 5/242 | NT | 9.9% | coding (58/1890 nt) | prpE | propionyl‑CoA synthetase |
? | NC_002947 | = 2681560 | 52 (1.100) | coding (83/1890 nt) | prpE | propionyl‑CoA synthetase |
CCCATGGCGGCGTGGGTATAGCGGTCCATACTCAAGTTTCGCCCTTCAATAACAACAAGTACCGGGTTTCTAACGACATGAGCTACCAGCACAGCTACGCCCATTCCATTTCCGACCCTGCCGCTTTCTGGGCGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/2681401‑2681535 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcggTGCCAGGCCAGGTGTGCGGCCTGTTCCGCCCAGAAAGCG < NC_002947/2681560‑2681522 CCCATGGCGGCGTGGGTATAGCGGTCCATACTCAAGTTTCGCCCTTCAATAACAACAAGTACCGGGTTTCTAACGACATGAGCTACCAGCACAGCTACGCCCATTCCATTTCCGACCCTGCCGCTTTCTGGGCGGTGCCAGGCCAGGTGT > 2:204925/1‑150 GTATAGCGGTCCATACTCAAGTTTCGCCCTTCAATAACAACAAGTACCGGGTTTCTAACGACATGAGCTACCAGCACAGCTACGCCCATTCCATTTCCGACCCTGCCGCTTTCTGGGCGGTGCCAGGCCAGGTGTGCGGCCTGTTCCGCC < 2:888704/150‑1 ATAGCGGTCCATACTCAAGTTTCGCCCTTCAATAACAACAAGTACCGGGTTTCTAACGACATGAGCTACCAGCACAGCTACGCCCATTCCATTTCCGACCCTGCCGCTTTCTGGGCGGTGCCAGGCCAGGTGTGCGGCCTGTTCCGCCCA < 1:204925/150‑1 TTCAATAACAACAAGTACCGGGTTTCTAACGACATGAGCTACCAGCACAGCTACGCCCATTCCATTTCCGACCCTGCCGCTTTCTGGGCGGTGCCAGGCCAGGTGTGCGGCCTGTTCCGCCCAGAAAGCG > 1:445135/1‑130 TTCAATAACAACAAGTACCGGGTTTCTAACGACATGAGCTACCAGCACAGCTACGCCCATTCCATTTCCGACCCTGCCGCTTTCTGGGCGGTGCCAGGCCAGGTGTGCGGCCTGTTCCGCCCAGAAAGCG < 2:445135/130‑1 CCCATGGCGGCGTGGGTATAGCGGTCCATACTCAAGTTTCGCCCTTCAATAACAACAAGTACCGGGTTTCTAACGACATGAGCTACCAGCACAGCTACGCCCATTCCATTTCCGACCCTGCCGCTTTCTGGGCGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/2681401‑2681535 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcggTGCCAGGCCAGGTGTGCGGCCTGTTCCGCCCAGAAAGCG < NC_002947/2681560‑2681522 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |