| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 3270926 | 42 (0.860) | 3 (0.070) | 3/232 | NT | 6.7% | coding (1202/1953 nt) | PP_2869 | FMN‑binding oxidoreductase |
| ? | NC_002947 | = 3270943 | 45 (0.990) | coding (1185/1953 nt) | PP_2869 | FMN‑binding oxidoreductase | |||||
CTGCCAGGGCCATTTCCCGTTGCAGGTTGGTACTGGCACCCCCGAACTCGCTACGCCGTGGCAGTAGCTGGGCCAGTAGCACCTGCCCACCGAGCTGCGGGCCCGCCTCGTACAGCGTGACCTGGTGCCCGCGCGCGGCGGCCACGGCGGCGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/3270774‑3270926‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cggcggcggGCCGGCCGGCATGAAGGCCGCCGCCGTGGCCGCCGCGCGCGGGCACCAGGTCACGCTGTACGAGGCGGGCCCGCAGCTCGGTGGGCAGGTGCTACTGGCCCAGCTACTGCCACGGCGTAGCGAGTTCGGGGGTGCCAGTACCAACCTG < NC_002947/3270943‑3270796 CTGCCAGGGCCATTTCCCGTTGCAGGTTGGTACTGGCACCCCCGAACTCGCTACGCCGTGGCAGTAGCTGGGCCAGTAGCACCTGCCCACCGAGCTGCGGGCCCGCCTCGTACAGCGTGACCTGGTGCCCGCGCGCGGCGGCCACGGCGG > 1:844358/1‑150CTGCCAGGGCCATTTCCCGTTGCAGGTTGGTACTGGCACCCCCGAACTCGCTACGCCGTGGCAGTAGCTGGGCCAGTAGCACCTGCCCACCGAGCTGCGGGCCCGCCTCGTACAGCGTGACCTGGTGCCCGCGCGCGGCGGCCACGGCGG > 2:1181754/1‑150 gtCCAGGGCCATTTCCCGTTGCAGGTTGGTACTGGCACCCCCGAACTCGCTACGCCGTGGCAGTAGCTGGGCCAGTAGCACCTGCCCACCGAGCTGCGGGCCCGCCTCGTACAGCGTGACCTGGTGCCCGCGCGCGGCGGGCACGGCGGg > 1:1149506/3‑149 TGCCAGGGCCATTTCCCGTTGCAGGTTGGTACTGGCACCCCCGAACTCGCTACGCCGTGGCAGTAGCTGGGCCAGTAGCACCTGCCCACCGAGCTGCGGGCCCGCCTCGTACAGCGTGACCTGGTGCCCGCGCGCGGCGGCCACGGCGGC > 1:47376/1‑150 CCGAACTCGCTACGCCGTGGCAGTAGCTGGGCCAGTAGCACCTGCCCACCGAGCTGCGGGCCCGCCTCGTACAGCGTGACCTGGTGCCCGCGCGCGGCGGCCACGGCGGCGGGCCGGCCGGCATGAAGGCCGCCGCCGTGGCCGCCGCGC < 2:47376/150‑1 GCTGGGCCAGTAGCACCTGCCCACCGAGCTGCGGGCCCGCCTCGTACAGCGTGACCTGGTGCCCGCGCGCGGCGGCCACGGCGGCGGGCCGGCCGGCATGAAGGCCGCCGCCGTGGCCGCCGCGCGC > 1:368803/1‑127 GCTGGGCCAGTAGCACCTGCCCACCGAGCTGCGGGCCCGCCTCGTACAGCGTGACCTGGTGCCCGCGCGCGGCGGCCACGGCGGCGGGCCGGCCGGCATGAAGGCCGCCGCCGTGGCCGCCGCGCGC < 2:368803/127‑1 CGGCGGCGGGCCGGCCGGCATGAAGGCCGCCGCCGTGGCCGCCGCGCGCGGGCACCAGGTCACGCTGTACGAGGCGGGCCCGCAGCTCGGTGGGCAGGTGCTACTGGCCCAGCTACTGCCACGGCGTAGCGAGTTCGGGGGTGCCA < 1:457659/146‑1 CGGCGGCGGGCCGGCCGGCATGAAGGCCGCCGCCGTGGCCGCCGCGCGCGGGCACCAGGTCACGCTGTACGAGGCGGGCCCGCAGCTCGGTGGGCAGGTGCTACTGGCCCAGCTACTGCCACGGCGTAGCGAGTTCGGGGGTGCCA > 2:457659/1‑146 GGCGGGCCGGCCGGCATGAAGGCCGCCGCCGTGGCCGCCGCGCGCGGGCACCAGGTCACGCTGTACGAGGCGGGCCCGCAGCTCGGTGGGCAGGTGCTACTGGCCCAGCTACTGCCACGGCGTAGCGAGTTCGGGGGTGCCAGTACCAAC < 1:734306/150‑1 GGCGGGCCGGCCGGCATGAAGGCCGCCGCCGTGGCCGCCGCGCGCGGGCACCAGGTCACGCTGTACGAGGCGGGCCCGCAGCTCGGTGGGCAGGTGCTACTGGCCCAGCTACTGCCACGGCGTAGCGAGTTCGGGGGTGCCAGTACCAAC < 1:941148/150‑1 GGGCCGGCCGGCATGAAGGCCGCCGCCGTGGCCGCCGCGCGCGGGCACCAGGTCACGCTGTACGAGGCGGGCCCGCAGCTCGGTGGGCAGGTGCTACTGGCCCAGCTACTGCCACGGCGTAGCGAGTTCGGGGGTGCCAGTACCAACCTG > 2:497820/1‑150 CTGCCAGGGCCATTTCCCGTTGCAGGTTGGTACTGGCACCCCCGAACTCGCTACGCCGTGGCAGTAGCTGGGCCAGTAGCACCTGCCCACCGAGCTGCGGGCCCGCCTCGTACAGCGTGACCTGGTGCCCGCGCGCGGCGGCCACGGCGGCGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/3270774‑3270926‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cggcggcggGCCGGCCGGCATGAAGGCCGCCGCCGTGGCCGCCGCGCGCGGGCACCAGGTCACGCTGTACGAGGCGGGCCCGCAGCTCGGTGGGCAGGTGCTACTGGCCCAGCTACTGCCACGGCGTAGCGAGTTCGGGGGTGCCAGTACCAACCTG < NC_002947/3270943‑3270796 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |