New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 3991356	45 (0.920)	4 (0.080)	4/240	NT	8.1%	coding (315/894 nt)	PP_3517	hypothetical protein
	?	NC_002947	= 3991373	47 (1.000)					coding (298/894 nt)	PP_3517	hypothetical protein

GGTCGCGTAGTCCATTTGCGCATCGTGATAGGCCAACAGCGACTGCAGAACACCCAGCTCGTTGCGCCCGATACGACGGGCGCGGATTTCGGCACTGCCCGCCTTGAGGTCGAAGCGCCAGCCCTGGCTGGTTCTGGTCAGCGGTATGGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/3991206‑3991356 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgggcGCCGGTCACTGGACC‑TTGCCCATACCGCTGACCAGAACCAGCCAGGGCTGGCGCTTCGACCTCAAGGCGGGCAGTGCCGAAATCCGCGCCCGTCGTATCGGGCGCAACGAGCTGGGTGTTCTGCAGTCGCTGTTGGCCTATCACGA  <  NC_002947/3991373‑3991228                                                                                                                                                                                                                                                                                                            GGTCGCGTAGTCCATTTGCGCATCGTGATAGGCCAACAGCGACTGCAGAACACCCAGCTCGTTGCGCCCGATACGACGGGCGCGGATTTCGGCACTGCCCGCCTTGAGGTCGAAGCGCCAGCCCTGGCTGGTTCTGGTCAGCGGTATGGG                                                                                                                                                      <  1:1068358/150‑1                                         GACTGCAGAACACCCAGCTCGTTGCGCCCGATACGACGGGCGCGGATTTCGGCACTGCCCGCCTTGAGGTCGAAGCGCCAGCCCTGGCTGGTTCTGGTCAGCGGTATGGGCGCCGGTCACTGGACC‑TTGCCCATACCGCTGACCAGAACC                                                                                                             >  1:353342/1‑150                                                                                  GCGGATTTCGGCACTGCCCGCCTTGAGGTCGAAGCGCCAGCCCTGGCTGGTTCTGGTCAGCGGTATGGGCGCCGGTCACTGGACC‑TTGCCCATAC                                                                                                                           >  1:880238/1‑95                                                                                  GCGGATTTCGGCACTGCCCGCCTTGAGGTCGAAGCGCCAGCCCTGGCTGGTTCTGGTCAGCGGTATGGGCGCCGGTCACTGGACC‑TTGCCCATAC                                                                                                                           <  2:880238/95‑1                                                                                                                    CGCCAGCCCTGGCTGGTTCTGGTCAGCGGTATGGGC‑CAGGTCCAGTGACCGGCGCCCATACCGCTGACCAGAACCAGCCAGGGCTGGCGCTTCGACCTCAAGGCGGGCAGTGCCGAAATCCGCGCCCGTCGTATCGGGCGCAACGCGCTG                                  >  2:353342/1‑150                                                                                                                                                    GGGCGCCGGTCACTGGACC‑TTGCCCATACCGCTGACCAGAACCAGCCAGGGCTGGCGCTTCGACCTCAAGGCGGGCAGTGCCGAAATCCGCGCCCGTCGTATCGGGCGCAACGAGCTGGGTGTTCTGCAGTCGCTGTTGGCCTATCACGA  >  1:1102364/1‑150                                                                                                                                                                                                                                                                                                            GGTCGCGTAGTCCATTTGCGCATCGTGATAGGCCAACAGCGACTGCAGAACACCCAGCTCGTTGCGCCCGATACGACGGGCGCGGATTTCGGCACTGCCCGCCTTGAGGTCGAAGCGCCAGCCCTGGCTGGTTCTGGTCAGCGGTATGGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/3991206‑3991356 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgggcGCCGGTCACTGGACC‑TTGCCCATACCGCTGACCAGAACCAGCCAGGGCTGGCGCTTCGACCTCAAGGCGGGCAGTGCCGAAATCCGCGCCCGTCGTATCGGGCGCAACGAGCTGGGTGTTCTGCAGTCGCTGTTGGCCTATCACGA  <  NC_002947/3991373‑3991228

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.