New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 4002976	57 (1.160)	3 (0.060)	3/238	NT	5.3%	coding (190/600 nt)	PP_3531	hypothetical protein
	?	NC_002947	= 4002991	54 (1.160)					coding (205/600 nt)	PP_3531	hypothetical protein

ACCTCTGCCCTGGCCGCCGATGACTGGCGCCTGGCCTACGACCGCGAAGGCATTCGCGTTTACGTGAGCAGCGCAGGCGCCTCGTCCTACCAGCAGTTTCGTGGTGTCAGCACCATGAAAGCCAGCGTGCGCACGCTCACTGACCTGCAGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/4002826‑4002976 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgcaggCCACCCGCAGGTTATCCTGCAGGTCAGTGAGCGTGCGCACGCTGGCTTTCATGGTGCTGACACCACGAAACTGCTGGTAGGACGAGGCGCCTGCGCTGCTCACGTAAACGCGAATGCCTTCGCGGTCGTAGGCCAGGCGCCAGTCATCG  <  NC_002947/4002991‑4002843                                                                                                                                                                                                                                                                                                              ACCTCTGCCCTGGCCGCCGATGACTGGCGCCTGGCCTACGACCGCGAAGGCATTCGCGTTTACGTGAGCAGCGCAGGCGCCTCGTCCTACCAGCAGTTTCGTGGTGTCAGCACCATGAAAGCCAGCGTGCGCACGCTCACTGACCTGCAG                                                                                                                                                        <  2:368618/150‑1                                 GGCCTACGACCGCGAAGGCATTCGCGTTTACGTGAGCAGCGCAGGCGCCTCGTCCTACCAGCAGTTTCGTGGTGTCAGCACCATGAAAGCCAGCGTGCGCACGCTCACTGACCTGCAGGCCACCCGCAGGTTATCCTGCAGGTCAGTGAG                                                                                                                        <  1:198073/150‑1                                                                                                                    TGAAAGCCAGCGTGCGCACGCTCACTGACCTGCAGGCCACCCGCAGGTTATCCT                                                                                                                                     >  1:1177788/1‑54                                                                                                                    TGAAAGCCAGCGTGCGCACGCTCACTGACCTGCAGGCCACCCGCAGGTTATCCT                                                                                                                                     <  2:1177788/54‑1                                                                                                                                                     AGGCCACCCGCAGGTTATCCTGCAGGTCAGTGAGCGTGCGCACGCTGGCTTTCATGGTGCTGACACCACGAAACTGCTGGTAGGACGAGGCGCCTGCGCTGCTCACGTAAACGCGAATGCCTTCGCGGTCGTAGGCCAGGCGCCAGTCAT    <  2:37307/150‑1                                                                                                                                                      GGCCACCCGCAGGTTATCCTGCAGGTCAGTGAGCGTGCGCACGCTGGCTTTCATGGTGCTGACACCACGAAACTGCTGGTAGGACGAGGCGCCTGCGCTGCTCACGTAAACGCGAATGCCTTCGCGGTCGTAGGCCAGGCGCCAGTCATC   <  1:881676/150‑1                                                                                                                                                       GCCACCCGCAGGTTATCCTGCAGGTCAGTGAGCGTGCGCACGCTGGCTTTCATGGTGCTGACACCACGAAACTGCTGGTAGGACGAGGCGCCTGCGCTGCTCACGTAAACGCGAATGCCTTCGCGGTCGTAGGCCAGGCGCCAGTCATCG  <  1:935045/150‑1                                                                                                                                                       GCCACCCGCAGGTTATCCTGCAGGTCAGTGAGCGTGCGCACGCTGGCTTTCATGGTGCTGACACCACGAAACTGCTGGTAGGACGAGGCGCCTGCGCTGCTCACGTAAACGCGAATGCCTTCGCGGTCGTAGGCCAGGCGCCAGTCATCG  <  2:739518/150‑1                                                                                                                                                                                                                                                                                                              ACCTCTGCCCTGGCCGCCGATGACTGGCGCCTGGCCTACGACCGCGAAGGCATTCGCGTTTACGTGAGCAGCGCAGGCGCCTCGTCCTACCAGCAGTTTCGTGGTGTCAGCACCATGAAAGCCAGCGTGCGCACGCTCACTGACCTGCAGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/4002826‑4002976 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgcaggCCACCCGCAGGTTATCCTGCAGGTCAGTGAGCGTGCGCACGCTGGCTTTCATGGTGCTGACACCACGAAACTGCTGGTAGGACGAGGCGCCTGCGCTGCTCACGTAAACGCGAATGCCTTCGCGGTCGTAGGCCAGGCGCCAGTCATCG  <  NC_002947/4002991‑4002843

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.