| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 4570378 | 79 (1.610) | 4 (0.090) | 4/236 | NT | 5.1% | coding (198/2775 nt) | treY | maltooligosyl trehalose synthase |
| ? | NC_002947 | = 4570402 | 75 (1.620) | coding (222/2775 nt) | treY | maltooligosyl trehalose synthase | |||||
TTCACCCTCGACCACGCTGTACCGCTGGTGCCGTATTTCGCCCAGCTGGGCATCAGCCACCTGTATGCCTCGCCCATCCTCAAGGCCCGCGCGGGCTCGCGCCATGGCTACGACGTGGTCGATCCTACCTGCGTCAACCCGGAGCTGGGCGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/4570226‑4570378‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gggcggcAACCAGGCGCTCCAGCGCGGCCTCGCCGCCCAGCTCCGGGTTGACGCAGGTAGGATCGACCACGTCGTAGCCATGGCGCGAGCCCGCGCGGGCCTTGAGGATGGGCGAGGCATACAGGTGGCTGATGCCCAGCTGGGCGAAATACGGCA < NC_002947/4570402‑4570254 TTCACCCTCGACCACGCTGTACCGCTGGTGCCGTATTTCGCCCAGCTGGGCATCAGCCACCTGTATGCCTCGCCCATCCTCAAGGCCCGCGCGGGCTCGCGCCACGGCTACGACGTGGTCGATCCTACCTGCGTCAACCCGGAGCTGGGC > 1:780806/1‑150 GCCCATCCTCAAGGCCCGCGCGGGCTCGCGCCATGGCTACGACGTGGTCGATCCTACCTGCGTCAACCCGGAGCTGGGCGGCAACCAGGCGCTCCAGCGCGGCCTCGCCGCCCAGCTCCGGGTTGA > 1:409241/1‑126 GCCCATCCTCAAGGCCCGCGCGGGCTCGCGCCATGGCTACGACGTGGTCGATCCTACCTGCGTCAACCCGGAGCTGGGCGGCAACCAGGCGCTCCAGCGCGGCCTCGCCGCCCAGCTCCGGGTTGA < 2:409241/126‑1 TCAAGGCCCGCGCGGGCTCGCGCCATGGCTACGACGTGGTCGATCCTACCTGCGTCAACCCGGAGCTGGGCGGCAACCAGGCGCTCCAGCGCGGCCTCGCCGCCCAGCTCCGGGTTGACGCAGGTAGGATC < 1:89835/131‑1 TCAAGGCCCGCGCGGGCTCGCGCCATGGCTACGACGTGGTCGATCCTACCTGCGTCAACCCGGAGCTGGGCGGCAACCAGGCGCTCCAGCGCGGCCTCGCCGCCCAGCTCCGGGTTGACGCAGGTAGGATC > 2:89835/1‑131 GCGGCAACCAGGCGCTCCAGCGCGGCCTCGCCGCCCAGCTCCGGGTTGACGCAGGTAGGATCGACCACGTCGTAGCCATGGCGCGAGCCCGCGCGGGCCTTGAGGATGGGCGAGGCATACAGGTGGCTGATGCCCAGCTGGGCGAAATAC > 1:6367/1‑150 GCGGCAACCAGGCGCTCCAGCGCGGCCTCGCCGCCCAGCTCCGGGTTGACGCAGGTAGGATCGACCACGTCGTAGCACTGGCGCGAGCCCGCGCGGGCCTTGAGGATGGGCGAGGCATACAGGTGGCTGATGCCCAGCTGGGCGAAATAC < 1:930240/150‑1 CGGCACCCAGGCGCTCCAGCGCGGCCTCGCCGCCCAGCTCCGGGTTGACACAGGTAGGATCGACCACGTCGTAGCCATGGCGCGAGCCCGCGCGGGCCTTGAGGATGGACGAGGCATACAGGTGGCTGATGCCCAGCTGGGCGAAATACG < 1:97262/150‑1 CAACCAGGCGCTCCAGCGCGGCCTCGCCGCCCAGCTCCGGGTTGACGCAGGTAGGATCGACCACGTCGTAGCCATGGCGCGAGCCCGCGCGGTCCTTGAGGATGGGCGAGGCATACAGGTGGCTGATGCCCAGCTGGGCGAAATACGGCA < 2:324479/150‑1 CAACCAGGCGCTCCAGCGCGGCCTCGCCGCCCAGCTCCGGGTTGACGCAGGTAGGATCGACCACGTCGTAGCCATGGCGCGAGCCCGCGCGGGCCTTGAGGATGGGCGAGGCATACAGGTGGCTGATGCCCAGCTGGGCGAAATACGG > 1:1101105/1‑148 CAACCAGGCGCTCCAGCGCGGCCTCGCCGCCCAGCTCCGGGTTGACGCAGGTAGGATCGACCACGTCGTAGCCATGGCGCGAGCCCGCGCGGGCCTTGAGGATGGGCGAGGCATACAGGTGGCTGATGCCCAGCTGGGCGAAATACGG < 2:1101105/148‑1 TTCACCCTCGACCACGCTGTACCGCTGGTGCCGTATTTCGCCCAGCTGGGCATCAGCCACCTGTATGCCTCGCCCATCCTCAAGGCCCGCGCGGGCTCGCGCCATGGCTACGACGTGGTCGATCCTACCTGCGTCAACCCGGAGCTGGGCGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/4570226‑4570378‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gggcggcAACCAGGCGCTCCAGCGCGGCCTCGCCGCCCAGCTCCGGGTTGACGCAGGTAGGATCGACCACGTCGTAGCCATGGCGCGAGCCCGCGCGGGCCTTGAGGATGGGCGAGGCATACAGGTGGCTGATGCCCAGCTGGGCGAAATACGGCA < NC_002947/4570402‑4570254 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |