New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 4731521	66 (1.350)	3 (0.060)	3/246	NT	4.4%	intergenic (‑32/+62)	lpdG/sucB	dihydrolipoyl dehydrogenase/2‑oxoglutarate dehydrogenase dihydrolipoyltranssuccinylase subunit
	?	NC_002947	= 4731573	65 (1.350)					intergenic (‑84/+10)	lpdG/sucB	dihydrolipoyl dehydrogenase/2‑oxoglutarate dehydrogenase dihydrolipoyltranssuccinylase subunit
Rejected: Frequency below/above cutoff threshold.

CCGCCTGGGCCTGCACCGATTACCACTACGTCGAATTTCTGGGTCATAAAAGATTCCTTATCAGCTACAAGCTACAAGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/4731443‑4731521 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcTGCGTACCGTGCCGGGCCTGGCTTCGCAAGAAGCCAGGCCGCGCGGTTCGCGGCTTGTAGCTTGTAGCTGATAAGGAATCTTTTATGACCCAGAAATTCGACGTAGTGGTAATCGGTGCAGGCCCAGGCGGCTATGTGGCTGCCATCAA  <  NC_002947/4731573‑4731425                                                                                                                                                                                                                                      CCGCCTGGGCCTGCACCGATTACCACTACGTCGAATTTCTGGGTCATAAAAGATTCCTTATCAGCTACAAGCTACAAGCTGCGTACCGTGCCGGGCCTGGCTTCGCAAGAAGCCAGGCCGCGCGGTTCGCGGCTT                                                                                               <  1:361088/135‑1 CCGCCTGGGCCTGCACCGATTACCACTACGTCGAATTTCTGGGTCATAAAAGATTCCTTATCAGCTACAAGCTACAAGCTGCGTACCGTGCCGGGCCTGGCTTCGCAAGAAGCCAGGCCGCGCGGTTCGCGGCTT                                                                                               >  2:361088/1‑135                                               TAAAAGATTCCTTATCAGCTACAAGCTACAAGCTGCGTACCGTGCCGGGCCTGGCTTCGCAAGAAGCCAGGCCGCGCGGTTCGCGGCTTGTAGCTTGTAGCTGATAAGGAATCTTTTATGACCCAGAAATTCGACGTAGTGGTAATCGGT                                  >  1:1258446/1‑150                                                                               CTGCGTACCGTGCCGGGCCTGGCTTCGCAAGAAGCCAGGCCGCGCGGTTCGCGGCTTGTAGCTTGTAGCTGATAAGGAATCTTTTATGACCCAGAAATTCGACGTAGTGGTAATCGGTGCAGGCCCAGGCGGCTATGTGGCTGCCATCAA  <  2:1090269/150‑1                                                                                                                                                                                                                                      CCGCCTGGGCCTGCACCGATTACCACTACGTCGAATTTCTGGGTCATAAAAGATTCCTTATCAGCTACAAGCTACAAGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/4731443‑4731521 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcTGCGTACCGTGCCGGGCCTGGCTTCGCAAGAAGCCAGGCCGCGCGGTTCGCGGCTTGTAGCTTGTAGCTGATAAGGAATCTTTTATGACCCAGAAATTCGACGTAGTGGTAATCGGTGCAGGCCCAGGCGGCTATGTGGCTGCCATCAA  <  NC_002947/4731573‑4731425

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.