New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 5537105	60 (1.220)	17 (0.440)	14/196	NT	24.5%	intergenic (+34/+69)	nadE/PP_4870	NH(3)‑dependent NAD(+) synthetase/azurin
	?	NC_002947	= 5537127	58 (1.510)					intergenic (+56/+47)	nadE/PP_4870	NH(3)‑dependent NAD(+) synthetase/azurin

CATGGCGTGACCTACGCGCAGATCGATGCCTTCCTGCATGGGCAGCCGGTTGACCAGGCAGCGTTCGACATCATCGTCGCCACCTACCGCAAGACCCAGCACAAGCGCGAACTGCCGTTCGCTCCTTGATAAGTGGCCTGCAGGAGCGGGTTCACCCGCGAAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/5536943‑5537105 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cctgcaggagcgggttcacccgcgaatGCGTCGGTGGGTTCACCCTCGTATTCGCGGGTGAACCCGCTCCTGCAGGCCACTTATCAAGGAGCGAACGGCAGTTCGCGCTTGTGCTGGGTCTTGCGGTAGGTGGCGACGATGATGTCGAACGCTGCCTGGTCAACCGGCT  <  NC_002947/5537127‑5536986                                                                                                                                                                                                                                                                                                                   CATGGCGTGACCTACGCGCAGATCGATGCCTTCCTGCATGGGCAGCCGGTTGACCAGGCAGCGTTCGACATCATCGTCGCCACCTACCGCAAGACCCAGCACAAGCGCGAACTGCCGTTCGCTCCTTGATAAGTGGCCTGCAGGAGCGGG                                                                                                                                                             <  2:318720/150‑1      CGTGACCTACGCGCAGATCGATGCCTTCCTGCATGGGCAGCCGGTTGACCAGGCAGCGTTCGACATCATCGTCGCCACCTACCGCAAGACCCAGCACAAGCGCGAACTGCCGTTCGCTCCTTGATAAGTGGCCTGCAGGAGCGGGTTCAC                                                                                                                                                        <  1:913270/150‑1                  GCAGATCGATGCCTTCCTGCATGGGCAGCCGGTTGACCAGGCAGCGTTCGACATCATCGTCGCCACCTACCGCAAGACCCAGCACAAGCGCGAACTGCCGTTCGCTCCTTGATAAGTGGCCTGCAGGAGCGG                                                                                                                                                              >  1:1008095/1‑132                  GCAGATCGATGCCTTCCTGCATGGGCAGCCGGTTGACCAGGCAGCGTTCGACATCATCGTCGCCACCTACCGCAAGACCCAGCACAAGCGCGAACTGCCGTTCGCTCCTTGATAAGTGGCCTGCAGGAGCGG                                                                                                                                                              <  2:1008095/132‑1                              CTTCCTGCATGGGCAGCCGGTTGACCAGGCAGCGTTCGACATCATCGTCGCCACCTACCGCAAGACCCAGCACAAGCGCGAACTGCCGTTCGCTCCTTGATAAGTGGCCTGCAGGAGC                                                                                                                                                                <  2:749209/118‑1                              CTTCCTGCATGGGCAGCCGGTTGACCAGGCAGCGTTCGACATCATCGTCGCCACCTACCGCAAGACCCAGCACAAGCGCGAACTGCCGTTCGCTCCTTGATAAGTGGCCTGCAGGAGC                                                                                                                                                                >  1:749209/1‑118                                    GCATGGGCAGCCGGTTGACCAGGCAGCGTTCGACATTATCGTCGCCACCTACCGCAAGACCCAGCACAAGCGCGAACTGCCGTTCGCTCCTTGATAAGTGGCCTGCAGGA                                                                                                                                                                  <  1:557385/110‑1                                    GCATGGGCAGCCGGTTGACCAGGCAGCGTTCGACATTATCGTCGCCACCTACCGCAAGACCCAGCACAAGCGCGAACTGCCGTTCGCTCCTTGATAAGTGGCCTGCAGGA                                                                                                                                                                  >  2:557385/1‑110                                     CATGGGCAGCCGGTTGACCAGGCAGCGTTCGACATCATCGTCGCCACCTACCGCAAGACCCATCACAAGCGCGAACTGCCGTTCGCTCCTTGATAAGTGGCCTGCAGGAGCGGGT                                                                                                                                                            >  2:629917/1‑115                                     CATGGGCAGCCGGTTGACCAGGCAGCGTTCGACATCATCGTCGCCACCTACCGCAAGACCCATCACAAGCGCGAACTGCCGTTCGCTCCTTGATAAGTGGCCTGCAGGAGCGGGT                                                                                                                                                            <  1:629917/115‑1                                         GGCAGCCGGTTGACCAGGCAGCGTTCGACATCATCGTCGCCACCTACCGCAAGACCCAGCACAAGCGCGAACTGCCGTTCGCTCCTTGATAAGTGGCCTGCAGGAGCGGGTTCACCCGCGAATGCGTCGGTGGGTTCACCCTCGTATTCG                                                                                                                     <  2:342418/150‑1                                          GCAGCCGGTCGACCAGGCAGCGTGCGACATCATCGGCGCCACCTACCGCAAGCCCCAGCACAAGCGCGAACTGCCGTTCTCTCCTTGATAAGGGGCCGGCAGGAGCGGGTTCACCCGCGAATGCGTCGGTGGGTTCACCCTCGGATTCac                                                                                                                    <  2:318800/150‑3                                           CAGCCGGTTGACCAGGCAGCGTTCGACATCATCGTCGCCACCTACCGCAAGACCCAGCACAAGCGCGAACTGCCGTTCGCTCCTTGATAAGTGGCCTGCAGGAGCGAGTTCACCCGCGAATGCGTCGGTGGGTTCACCCTCGTATTCGCG                                                                                                                   <  2:544847/150‑1                                            AGCCGGTTGACCAGGCAGCGTTCGACATCATCGTCGCCACCTACCGCAAGACCCAGCACAAGCGCGAACTGCCGTTCGCTCCTTGATAAGTGGCCTGCAGGAGCGGGTTCACCCGCGAATGCGTCGGTGGGTTCACCCTCGTATTCGCGG                                                                                                                  <  2:575810/150‑1                                                  TTGACCAGGCAGCGTTCGACATCATCGTCGCCACCTACCGCAAGACCCAGCACAAGCGCGAACTGCCGTTCGCTCCTTGATAAGTGGCCTGCAGGAGCGGGTTCACCCGCGAATGCGTCGGTGGGTTCACCCTCGTATTCGCGGGTGAAC                                                                                                            <  1:409082/150‑1                                                              CGTTCGACATCATCGTCGCCACCTACCGCAAGACCCAGCACAAGCGCGAACTGCCGTTCGCTCCTTGATAAGTGGCCTGCAGGAGCGGGTTCACCCGCGAATACGTCGGTGGGTTCACCCTCGTATTCGCGG                                                                                                                  <  1:633115/132‑1                                                              CGTTCGACATCATCGTCGCCACCTACCGCAAGACCCAGCACAAGCGCGAACTGACGTTCGCTCCTTGATAAGTGGCCTGCAGGAGCGGGTTCACCCGCGAATACGTCGGTGGGTTCACCCTCGTATTCGCGG                                                                                                                  >  2:633115/1‑132                                                               GTTCGACATCATCGTCGCCACCTACCGCAAGACCCAGCACAAGCGCGAACTGCCGTTCGCTCCTTGATAAGTGGCCTGCAGGAGCGGGTTCACCCGCGAATGCGTCGGTGGGTTCACCCTCGTATTCGCGG                                                                                                                  >  1:1020430/1‑131                                                               GTTCGACATCATCGTCGCCACCTACCGCAAGACCCAGCACAAGCGCGAACTGCCGTTCGCTCCTTGATAAGTGGCCTGCAGGAGCGGGTTCACCCGCGAATGCGTCGGTGGGTTCACCCTCGTATTCGCGG                                                                                                                  <  2:1020430/131‑1                                                                TTCGACATCATCGTCGCCACCTACCGCAAGACCCAGCACAAGCGCGAACTGCCGTTCGCTCCTTGATAAGTGGC                                                                                                                                                                          >  1:649237/1‑74                                                                TTCGACATCATCGTCGCCACCTACCGCAAGACCCAGCACAAGCGCGAACTGCCGTTCGCTCCTTGATAAGTGGC                                                                                                                                                                          <  2:649237/74‑1                                                                   GACATCATCGTCGCCACCTACCGCAAGACCCAGCACAAGCGCGAACTGCCGTTCGCTCCTTGATAAGTGGCCTGCAGGAGCGGGTTCACCCGCGAATGCGTCGGTGGGTTCACCCTCGTATTCGCGG                                                                                                                  >  2:491985/1‑127                                                                   GACATCATCGTCGCCACCTACCGCAAGACCCAGCACAAGCGCGAACTGCCGTTCGCTCCTTGATAAGTGGCCTGCAGGAGCGGGTTCACCCGCGAATGCGTCGGTGGGTTCACCCTCGTATTCGCGG                                                                                                                  <  1:491985/127‑1                                                                      ATCATCGTCGCCACCTACCGCAAGACCCAGCACAAGCGCGAACTGCCGTTCGCTCCTTGATAAGTGGCCTGCAGGAGCGGGTTCACCCGCGAATGCGTCGGTGGGTTCACCCTC                                                                                                                            <  2:285141/114‑1                                                                      ATCATCGTCGCCACCTACCGCAAGACCCAGCACAAGCGCGAACTGCCGTTCGCTCCTTGATAAGTGGCCTGCAGGAGCGGGTTCACCCGCGAATGCGTCGGTGGGTTCACCCTC                                                                                                                            >  1:285141/1‑114                                                                                   CCTACCGCAAGACCCAGCACAAGCGCGAACTGCCGTTCGCTCCTTGATAAGTGGCCTGCAGGAGCGGGTTCACCCGCGAATGCGTCGGTGGGTTCACCCTCGTATTCGCGGGTGAA                                                                                                             >  2:261262/1‑116                                                                                   CCTACCGCAAGACCCAGCACAAGCGCGAACTGCCGTTCGCTCCTTGATAAGTGGCCTGCAGGAGCGGGTTCACCCGCGAATGCGTCGGTGGGTTCACCCTCGTATTCGCGGGTGAA                                                                                                             <  1:261262/116‑1                                                                                                   GCACAAGCGCGAACTGCCGTTCGCTCCTTGATAAGTGGCCTGCAGGAGCGGGTTCACCCGCGAATGCGTCGGTGGGTTCACCCTCGTATTCGCGGG                                                                                                                 >  2:628177/1‑96                                                                                                   GCACAAGCGCGAACTGCCGTTCGCTCCTTGATAAGTGGCCTGCAGGAGCGGGTTCACCCGCGAATGCGTCGGTGGGTTCACCCTCGTATTCGCGGG                                                                                                                 <  1:628177/96‑1                                                                                                                                          CTGCAGGAGCGGGTTCACCCGCGAATGCGTCGGTGGGTTCACCCTCGTATTCGCGGGTGAACCCGCTCCTGCAGGCCACTTATCAAGGAGCGAACGGCAGTTCGCGCTTGTGCTGGGTCTTGCGGTAGGTGGCGACGATGATGTCGAACG                    >  1:877293/1‑150                                                                                                                                                GAGCGGGTTCACCCGCGAATACGAGGGTGAACCCACCGACGCATTCGCGGGTGAACCCGCTCCTGCAGGCCACTTATCAAGGAGCGAACGGCAGTTCGCGCTTGTGCTGGGTCTTGCGGTAGGTGGCGACGATGATGTCGAACGCTGCCT              >  1:882052/1‑150                                                                                                                                                       TTCACGCGCGAATGCGTCGGGGTGCTCACCTGCGTGTTCGGGGCTGAACCCGCTCCTGCAGGTCACTTATCATGGAGCGAACGGCAGTTCGCGCTTGTGCTGGGTCTTGCGGTAGGTGGCGACGATGATGTCGAACGCTGCCTGGTCAAC       <  1:221933/150‑1                                                                                                                                                        TCACCCGCGAATGCGTCGGTGGGTTCACCCTCGTATTCGCGGGTGAACCCGCTCCTGCAGGCCCCTTCTCCAGGAGCGAACGGCAGTTCGCGCTTGTGCTGGGTCTTGCGGTAGGTGGCGCCAGCGGGGTCGAACACTGCCTGGTCAACC      >  1:293/1‑150                                                                                                                                                          ACCCGCGAATGCGTCGGTGGGTTCACCCTCGTATTCGCGGGTGAACCCGCTCCTGCAGGCCACTTATCAAGGAGCGAACGGCAGTTCGCGCTTGTGCTGGGTCTTGCGGTAGGTGGCGACGATGATGTCGAACGCTGCCTGGTCAACCGG    >  1:1057185/1‑150                                                                                                                                                            CCGCGAATGCGTCGGTGGGTTCACCCTCGTATTCGCGGGTGAACCCGCTCCTGCAGGCCACTTATCAAGGAGCGAACGGCAGTTCGCGCTTGTGCTGGGTCTTGCGGTAGGTGGCGACGATGATGTCGAACGCTGCCTGGTCAACCGGCT  >  2:1124266/1‑150                                                                                                                                                                                                                                                                                                                   CATGGCGTGACCTACGCGCAGATCGATGCCTTCCTGCATGGGCAGCCGGTTGACCAGGCAGCGTTCGACATCATCGTCGCCACCTACCGCAAGACCCAGCACAAGCGCGAACTGCCGTTCGCTCCTTGATAAGTGGCCTGCAGGAGCGGGTTCACCCGCGAAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/5536943‑5537105 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cctgcaggagcgggttcacccgcgaatGCGTCGGTGGGTTCACCCTCGTATTCGCGGGTGAACCCGCTCCTGCAGGCCACTTATCAAGGAGCGAACGGCAGTTCGCGCTTGTGCTGGGTCTTGCGGTAGGTGGCGACGATGATGTCGAACGCTGCCTGGTCAACCGGCT  <  NC_002947/5537127‑5536986

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.