| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 5538592 = | 55 (1.120) | 9 (0.220) | 8/208 | NT | 18.4% | intergenic (+34/+87) | PP_4871/PP_4872 | lysine decarboxylase family protein/hypothetical protein |
| ? | NC_002947 | 5538647 = | 34 (0.830) | intergenic (+89/+32) | PP_4871/PP_4872 | lysine decarboxylase family protein/hypothetical protein | |||||
GGAGCGCAAAGAGGCGAGCAAGGGTGGCAAGGGCAACAAGAAGCCGCGTCAGCCTGTCATTCCGCGTTAACTGATCGACTATTGGGGCTGCTTTGCAGCCCATCGCGACACAAGGCCGCTCCCCCATTGCCTTTGTGGGAGCGGCCTTGTGTCGCGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5538748‑5538592‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gggagcggccttgtgtcgcgaTGGGCTGCAAAGCAGCCCCAATAGTCGATCAGTTAACGCGGAATGACAGGCTGACGCGGCTTCTTGTTGCCCTTGCCACCCTTGCTCGCCTCTTTGCGCTCCTTGGCAGCCTGCTGGTTACGCGCAAACGCCTCGGCCTTGGCC > NC_002947/5538647‑5538790 GGAGCGCAAAGAGGCGAGCAAGGGTGGCAAGGGCAACAAGAAGCCGCGTCAGCCTGTCATTCCGCGTTAACTGATCGACTATTGGGGCTGCTTTGCAGCCCATCGCGACACAAGGCCGCTCCCCCATTGCCTTTGTGGGAGCGGCCTTGT < 2:973037/150‑1 GAGCGCAAAGAGGCGAGCAAGGGTGGCAAGGGCAACAAGAAGCCGCGTCAGCCTGTCATTCCGCGTTAACTGATCGACTATTGGGGCTGCTTTGCAGCCCATCGCGACACAAGGCCGCTCCCCCATTGCCTTTGTGGGAGCGGCCTTGTG < 2:611773/150‑1 GCAAAGAGGCGAGCAAGGGTGGCAAGGGCAACAAGAAGCCGCGTCAGCCTGTCATTCCGCGTTAACTGATCGACTATTGGGGCTGCTTTGCAGCCCATCGCGACACAAGGCCGCTCCCCCATTGCCTTTGTGGGAGCGGCCTT < 2:540785/143‑1 GCAAAGAGGCGAGCAAGGGTGGCAAGGGCAACAAGAAGCCGCGTCAGCCTGTCATTCCGCGTTAACTGATCGACTATTGGGGCTGCTTTGCAGCCCATCGCGACACAAGGCCGCTCCCCCATTGCCTTTGTGGGAGCGGCCTT > 1:540785/1‑143 CAAAGAGGCGAGCAAGGGTGGCAAGGGCAACAAGAAGCCGCGTCAGCCTGTCATTCCGCGTTAACTGATCGACTATTGGGGCTGCTTTGCAGCCCATCGCGACACAAGGCCGCTCCCCCATTGCCTTTGTGGGAGCGGCCTTGTGTCGCG > 1:1091273/1‑150 GAGCAAGGGTGGCAAGGGCAACAAGAAGCCGCGTCAGCCTGTCATTCCGCGTTAACTGATCGACTATTGGGGCTGCTTTGCAGCCCATCGCGACACAAGGCCGCTCCCCCATTGCCTTTGTGGGA < 1:1271038/125‑1 GAGCAAGGGTGGCAAGGGCAACAAGAAGCCGCGTCAGCCTGTCATTCCGCGTTAACTGATCGACTATTGGGGCTGCTTTGCAGCCCATCGCGACACAAGGCCGCTCCCCCATTGCCTTTGTGGGA > 2:1271038/1‑125 CGACACAAGGCCGCTCCCCCATTGCCTTTGTGGGAGCGGCCTTGTGTCGCGATGGGCTGCAAAGCAG > 1:498416/1‑67 CGACACAAGGCCGCTCCCCCATTGCCTTTGTGGGAGCGGCCTTGTGTCGCGATGGGCTGCAAAGCAG < 2:498416/67‑1 CAAGGCCGCTCCCCCATTGCCTTTGTGGGAGCGGCCTTGTGTCGCGATGGGCTGCAAAGCAGCCCCAATAGTCGATCAGTTAACGCGGAATGACAGGCTGACGCGGCTTCTTGT > 2:510802/1‑114 CAAGGCCGCTCCCCCATTGCCTTTGTGGGAGCGGCCTTGTGTCGCGATGGGCTGCAAAGCAGCCCCAATAGTCGATCAGTTAACGCGGAATGACAGGCTGACGCGGCTTCTTGT < 1:510802/114‑1 GCCGCTCCCCCATTGCCTTTGTGGGAGCGGCCTTGTGTCGCGATGGGCTGCAAAGCAGCCCCAATAGTCGATCAGTTAACGCGGAATGACAGGCTGACGCGGCTTCTTGg > 1:926148/1‑109 GCCGCTCCCCCATTGCCTTTGTGGGAGCGGCCTTGTGTCGCGATGGGCTGCAAAGCAGCCCCAATAGTCGATCAGTTAACGCGGAATGACAGGCTGACGCGGCTTCTTGT < 2:926148/110‑1 CGCTCCCCCATTGCCTTTGTGGGAGCGGCCTTGTGTCGCGATGGGCTGCAAAGCAGCCCCAATAGTCGATCAGTTAACGCGGAATGACAGGCTGACGCGGCTTCTTGTTGCCCTTGCCACCCTTGCTCGCCTCTTTGCGCTCCTTGGCAG > 1:586618/1‑150 TCCCCCATTGCCTTTGTGGGAGCGGCCTTGTGTCGCGATGGGCTGCAAAGCAGCCCCAATAGTCGATCAGTTAACGCGGAATGACAGGCTGACGCGGCTTCTTG < 2:318790/104‑1 TCCCCCATTGCCTTTGTGGGAGCGGCCTTGTGTCGCGATGGGCTGCAAAGCAGCCCCAATAGTCGATCAGTTAACGCGGAATGACAGGCTGACGCGGCTTCTTG > 1:318790/1‑104 CCTTGTGTCGCGATGGGCTGCAAAGCAGCCCCAATAGTCGATCAGTTAACGCGGAATGACAGGCTGACGCGGCTTCTTGTTGCCCTTGCCACCCTTGCTCGCCTCTTTGCGCTCCTTGGCAGCCTGCTGGTTACGCGCAAACGCCTC < 2:50202/147‑1 CCTTGTGTCGCGATGGGCTGCAAAGCAGCCCCAATAGTCGATCAGTTAACGCGGAATGACAGGCTGACGCGGCTTCTTGTTGCCCTTGCCACCCTTGCTCGCCTCTTTGCGCTCCTTGGCAGCCTGCTGGTTACGCGCAAACGCCTC > 1:50202/1‑147 GTGTCGCGATGGGCTGCAAAGCAGCCCCAATAGTCGATCAGTTAACGCGGAATGACAGGCTGACGCGGCTTCTTGTTGCCCTTGCCACCCTTGCTCGCCTCTTTGCGCTCCTTGGCAGCCTGCTGGTTACGCGCAAACGCCTCGGCCTTG < 1:1135922/150‑1 TCGCGATGGGCTGCAAAGCAGCCCCAATAGTGGATCAGTTAACGCGGAATGACAGGCTGACGCGGCTTCTTGTTGCCCTTGCCACCCTTGCTCGCCTCTTTGCGCTCCTTGGCAGCCTGCTGGTTACGCGCAAACGCCTCGGCCTTGGCC > 1:447457/1‑150 GGAGCGCAAAGAGGCGAGCAAGGGTGGCAAGGGCAACAAGAAGCCGCGTCAGCCTGTCATTCCGCGTTAACTGATCGACTATTGGGGCTGCTTTGCAGCCCATCGCGACACAAGGCCGCTCCCCCATTGCCTTTGTGGGAGCGGCCTTGTGTCGCGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5538748‑5538592‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gggagcggccttgtgtcgcgaTGGGCTGCAAAGCAGCCCCAATAGTCGATCAGTTAACGCGGAATGACAGGCTGACGCGGCTTCTTGTTGCCCTTGCCACCCTTGCTCGCCTCTTTGCGCTCCTTGGCAGCCTGCTGGTTACGCGCAAACGCCTCGGCCTTGGCC > NC_002947/5538647‑5538790 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |