New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 5560785 = | 67 (1.370) | 5 (0.110) | 5/224 | NT | 7.8% | intergenic (‑238/+64) | hisZ/hflC | ATP phosphoribosyltransferase regulatory subunit/integral membrane ATP‑dependent zinc metallopeptidase |
? | NC_002947 | 5560822 = | 59 (1.340) | intergenic (‑275/+27) | hisZ/hflC | ATP phosphoribosyltransferase regulatory subunit/integral membrane ATP‑dependent zinc metallopeptidase |
AGGCATACCGCGAGAGCTTCTCGAGCAAGAGCGACGTGATGGTCCTGGACCCGAAGAACGAATTCTTCCGTTACCTGGACAAGAGCAGACCGTGATGCTCAGGCCCTGATTTTCATGCAGCGGCACCCCGCCTGGCAGCTAATGCACCAGGCGGGGTGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5560943‑5560785 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccaggcggggtgcCGCTGCATGAAAATCAGGGCCTGAGCATCACGGTCTGCTCTTGTCCAGGTAACGGAAGAATTCGTTCTTCGGGTCCAGGACCATCACGTCGCTCTTGCTCGAGAAGCTCTCGCGGTATGCCTGCAGGCTACGGTGGAACGCATAGAA > NC_002947/5560822‑5560968 AGGCATACCGCGAGAGCTTCTCGAGCAAGAGCGACGTGATGGTCCTGGACCCGAAGAACGAATTCTTCCGTTACCTGGACAAGAGCAGACCGTGATGCTCAGGCCCTGATTTTCATGCAGCGGCACCCCGCCTGGCAGCTAATGCACCAG < 2:725659/150‑1 ATACCGCGAGAGCTTCTCGAGCAAGAGCGACGTGATGGTCCTGGACCCGAAGAACGAATTCTTCCGTTACCTGGACAAGAGCAGACCGTGATGCTCAGGCCCTGATTTTCATGCAGCGGCACCCCGCCTGGCAGCTAATGCACCAGGCGG > 1:1062853/1‑150 ACCGCGAGAGCTTCTCGAGCAAGAGCGACGTGATGGTCCTGGACCCGAAGAACGAATTCTTCCGTTACCTGGACAACACACGTCTGTGATGCTCAGGCCCTGATTTTCATGCAGCGGCACCCCGCCTGGCAGCTAATGCACCAGGCGGGG > 1:222762/1‑150 CCGCGAGAGCTTCTCGAGCAAGAGCGACGTGATGGTCCTGGACCCGAAGAACGAATTCTTCCGTTACCTGGACAAGAGCAGACCGTGATGCTCAGGCCCTGATTTTCATGCAGCGGCACCCCGCCTGGCAGCTAATGCACCAGGCGGGGT < 2:730845/150‑1 GCGAGAGCTTCTCGAGCAAGAGCGACGTGATGGTCCTGGACCCGAAGAACGAATTCTTCCGTTACCTGGACAAGAGCAGACCGTGATGCTCAGGCCCTGATTTTCATGCAGCGGCACCCCGCCTGGCAGCTAATGCACCAGGCGGGGTGC < 1:1243678/150‑1 GCACCCCGCCTGGCAGCTAATGCACCAGGCGGGGTGCCGCTGCATGAAAATCAGGGCCTGAGCATCACGGTCTGCTCTTGTCCAGGTAACGGAA < 1:213980/94‑1 GCACCCCGCCTGGCAGCTAATGCACCAGGCGGGGTGCCGCTGCATGAAAATCAGGGCCTGAGCATCACGGTCTGCTCTTGTCCAGGTAACGGAA > 2:213980/1‑94 CCCGCCTGGCAGCTAATGCACCAGGCGGGGTGCCGCTGCATGAAAATCAGGGCCTGAGCATCACG < 1:919847/65‑1 CCCGCCTGGCAGCTAATGCACCAGGCGGGGTGCCGCTGCATGAAAATCAGGGCCTGAGCATCACG > 2:919847/1‑65 CTGGCAGCTAATGCACCAGGCGGGGTGCCGCTGCATGAAAATCAGGGCCTGAGCATCACGGTCTGCTCTTGTCCAGGTAACGGAAGAATTCGTTCTTCGGGTCCAGGACCATCACGTCGCTCTTGCTCGAGAAGCTCTCGCGGTATGCCT > 1:1226210/1‑150 CAGGCGGGGTGCCGGTGTGTGAAAATCAGGGCCTGAGCATCACGGTCTGCTCTTGTCCAGGTAACGGAAGAATTCGTTCTTCGGGTCCAGGACCATCACGTCGCTCTTGCTCGAGAAGCTCTCGCGGTATGCCTGCAGGCTACGGTGGAA > 1:685086/1‑150 GCGGGGTGCCGCTGCATGAAAATCAGGGCCTGAGCATCACGGTCTGCTCTTGTCCAGGTAACGGAAGAATTCGTTCTTCGGGTCCAGGACCATCACGTCGCTCTTGCTCGAGAAGCTCTCGCGGTATGCCTGCAGGCTACGGTGGAACGC < 2:1226210/150‑1 TGCCGCTGCATGAAAATCAGGGCCTGAGCATCACGGTCTGCTCTTGTCCAGGTAACGGAAGAATTCGTTCTTCGGGTCCAGGACCATCACGTCGCTCTTGCTCGAGAAGCTCTCGCGGTATGCCTGCAGGCTACGGTGGAACGCATAGAA < 1:842181/150‑1 CCGCTGCATGAAAATCAGGGCCTGAGCATCACGGTCTGCTCTTGTCCAGGTAACGGAAGAATTCGTTCTTCGGGTCCAGGACCATCACGTCGCTCTTGCTCGAGAAGCTCTCG < 1:1172760/113‑1 CCGCTGCATGAAAATCAGGGCCTGAGCATCACGGTCTGCTCTTGTCCAGGTAACGGAAGAATTCGTTCTTCGGGTCCAGGACCATCACGTCGCTCTTGCTCGAGAAGCTCTCG > 2:1172760/1‑113 AGGCATACCGCGAGAGCTTCTCGAGCAAGAGCGACGTGATGGTCCTGGACCCGAAGAACGAATTCTTCCGTTACCTGGACAAGAGCAGACCGTGATGCTCAGGCCCTGATTTTCATGCAGCGGCACCCCGCCTGGCAGCTAATGCACCAGGCGGGGTGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5560943‑5560785 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccaggcggggtgcCGCTGCATGAAAATCAGGGCCTGAGCATCACGGTCTGCTCTTGTCCAGGTAACGGAAGAATTCGTTCTTCGGGTCCAGGACCATCACGTCGCTCTTGCTCGAGAAGCTCTCGCGGTATGCCTGCAGGCTACGGTGGAACGCATAGAA > NC_002947/5560822‑5560968 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |