New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 5627662 | 49 (1.000) | 3 (0.060) | 3/238 | NT | 5.0% | intergenic (‑110/+83) | PP_4944/rlmJ | carbamoyltransferase/23S rRNA (adenine(2030)‑N(6))‑methyltransferase |
? | NC_002947 | = 5627735 | 67 (1.440) | intergenic (‑183/+10) | PP_4944/rlmJ | carbamoyltransferase/23S rRNA (adenine(2030)‑N(6))‑methyltransferase |
CATGGCTAAGGGCGCCGGACAGGCCAAGAATCGTCAATGCCAAGGGATTAGCCTCTTCATTCGGTAAAAATGCGCCAGCGGCCTCTTGGGCGGATGGCGGCTAAAGGGCGGGATTATAACGCAAACATTGGAGGCACACCGCCCCCTTGTAGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/5627510‑5627662 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgtaggCGCGGGTTTGCCCGCGAACACCGGCTACGCCGGTGCCATCCACCGCGTTGCCTGCTTCGCGGGTGAACCCGCCCCTACAAGGGGGCGGTGTGCCTCCAATGTTTGCGTTATAATCCCGCCCTTTAGCCGCCATCCGCCCAAGAGGCCGC < NC_002947/5627735‑5627587 CATGGCTAAGGGCGCCGGACAGGCCAAGAATCGTCAATGCCAAGGGATTAGCCTCTTCATTCGGTAAAAATGCGCCAGCGGCCTCTTGGGCGGATGGCGGCTAAAGGGCGGGATTATAACGCAAACATTGGAGGCACACCGCCCCCTTGT > 2:537147/1‑150 GGCTAAGGGCGCCGGACAGGCCAAGAATCGTCAATGCCAAGGGATTAGCCTCTTCATTCGGTAAAAATGCGCCAGCGGCCTCTTGGGCGGATGGCGGCTAAAGGGCGGGATTATAACGCAAACATTGGAGGCACACCGCCCCCTTGTAGG > 2:488523/1‑150 TCGGTAAAAATGCGCCAGCGGCCTCTTGGGCGGATGGCGGCTAAAGGGCGGGATTATAACGCAAACATTGGAGGCACACCGCCCCCTTGTAGGCGCGGGTTTGCCCGCGAACACCGGCTACGCCGGTGCCATCCACCGCGTTGCCTGCTT > 2:113974/1‑150 TGCGCCAGCGGCCTCTTGGGCGGATGGCGGCTAAAGGGCGGGATTATAACGCAAACATTGGAGGCACACCGCCCCCTTGTAGGCGCGGGTTTGCCCGCGAACACCGGCTACGCCGGTGCCATCCACCGCGTTGCCTGCTTCGCGGGTGAA < 2:1254908/150‑1 CGGCCTCTTGGGCGGATGGCGGCTAAAGGGCGGGATTATAACGCAAACATTGGAGGCACACCGCCCCCTTGTAGGCGCGGGTTTGCCCGCGAACACCGGCTACGCCGGTGCCATCCACCGCGTTGCCTGCTTCGCGGGTGAACCCGCCCC < 1:113974/150‑1 TAGGCGCGGGTTTGCCCGCGAACACCGGCTACGCCGGTGCCATCCACCGCGTTGCCTGCTTCGCGGGTGAACCCGCCCCTACAAGGGGGCGGTGTGCCTCCAATGTTTGCGTTATAATCCCGCCCTTTAGCCGCCATCCGCCCAAGAGGC < 1:775856/150‑1 GCGCGGGTTTGCCCGCGAACACCGGCTACGCCGGTGCCATCCACCGCGTTGCCTGCTTCGCGGGTGAACCCGCCCCTACAAGGGGGCGGTGTGCCTCCAATGTTTGCGTTATAATCACGCCCTTTAGCCGCCATCCGCCCAAGAGGCCGC > 1:866279/1‑150 CATGGCTAAGGGCGCCGGACAGGCCAAGAATCGTCAATGCCAAGGGATTAGCCTCTTCATTCGGTAAAAATGCGCCAGCGGCCTCTTGGGCGGATGGCGGCTAAAGGGCGGGATTATAACGCAAACATTGGAGGCACACCGCCCCCTTGTAGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/5627510‑5627662 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgtaggCGCGGGTTTGCCCGCGAACACCGGCTACGCCGGTGCCATCCACCGCGTTGCCTGCTTCGCGGGTGAACCCGCCCCTACAAGGGGGCGGTGTGCCTCCAATGTTTGCGTTATAATCCCGCCCTTTAGCCGCCATCCGCCCAAGAGGCCGC < NC_002947/5627735‑5627587 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |