New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 5864480 | 64 (1.300) | 3 (0.070) | 3/234 | NT | 4.8% | coding (1727/2253 nt) | cadA‑III | cadmium translocating P‑type ATPase |
? | NC_002947 | = 5864515 | 58 (1.260) | coding (1692/2253 nt) | cadA‑III | cadmium translocating P‑type ATPase | |||||
Rejected: Frequency below/above cutoff threshold. |
AGCTTGTCGGCCGGCAACAGGTTGCCCTCGGCGCGGTCGATTCCCACCACGGCAGCAATGGCCTGCGCAGTATGCGGATTGTCACCGGTCAGCATGACAGTCTTGATACCCAGCTGATGCAATTCGGCGATCGCCTGACGGCTGCTGTCCTTGACCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/5864324‑5864480 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cttgaccgCTCCGGGCCACTGGCACTGTTCGCCGTGGCCGACACGGTCAAGGACAGCAGCCGTCAGGCGATCGCCGAATTGCATCAGCTGGGTATCAAGACTGTCATGCTGACCGGTGACAATCCGCATACTGCGCAGGCCATTGCTGCCGTGGTGG < NC_002947/5864515‑5864367 AGCTTGTCGGCCGGCAACAGGTTGCCCTCGGCGCGGTCGATTCCCACCACGGCAGCAATGGCCTGCGCAGTATGCGGATTGTCACCGGTCAGCATGACAGTCTTGATACCCAGCTGATGCAATTCGGCGATCGCCTGACGGCTGCTGTCC < 1:725509/150‑1 GCTTGTCGGCCGGCAACAGGTTGCCCTCGGCGCGGTCGATTCCCACCACGGCAGCAATGGCCTGCGCAGTATGCGGATTGTCACCGGTCAGCATGACAGTCTTGATACCCAGCTGATGCAATTCGGCGATCGCCTGACGGCTGCTGTCCT > 1:1257765/1‑150 GCTTGTCGGCCGGCAACAGGTTGCCCTCGGCGCGGTCGATTCCCACCACGGCAGCAATGGCCTGCGCAGTATGCGGATTGTCACCGGTCAGCATGACAGTCTTGATACCCAGCTGATGCAATTCGGCGATCGCCTGACGGCTGCTGTCCT > 1:678472/1‑150 TGTCGGCCGGCAACAGGTTGCCCTCGGCGCGGTCGATTCCCACCACGGCAGCAATGGCCTGCGCAGTATGCGGATTGTCACCGGTCAGCATGACAGTCTTGATACCCAGCTGATGCAATTCGGCGATCGCCTGACGGCTGCTGTCCTTGA < 2:1106013/150‑1 TCGGCCGGCAACAGGTTGCCCTCGGCGCGGTCGATTCCCACCACGGCAGCAATGGCCTGCGCAGTATGCGGATTGTCACCGGTCAGCATGACAGTCTTGATACCCAGCTGATGCAATTCGGCGATCGCCTGACGGCTGCTGTCCTTGACC < 2:1088436/150‑1 CGCAGTATGCGGATTGTCACCGGTCAGCATGACAGTCTTGATACCCAGCTGATGCAATTCGGCGATCGCCTGACGGCTGCTGTCCTTGACCGCTCCGGGCCACTGGCACTGTTCGCCGTGGCCGACACGGTCAAGGACAGCAGCCGTCAG < 2:678472/150‑1 AGCATGACAGTCTTGATACCCAGCTGATGCAATTCGGCGATCGCCTGACGGCTGCTGTCCTTGACCGCTCCGGGCCACTGGCACTGTTCGCCGTGGCCGACACGGTCAA > 1:355069/1‑109 AGCATGACAGTCTTGATACCCAGCTGATGCAATTCGGCGATCGCCTGACGGCTGCTGTCCTTGACCGCTCCGGGCCACTGGCACTGTTCGCCGTGGCCGACACGGTCAA < 2:355069/109‑1 GACCGCTCCGGGCCACTGGCACTGTTCGCCGTGGCCGACACGGTCAAGGACAGCAGCCGTCAGGCGATCGCCGAATTGCATCAGCTGGGTATCAAGACTGTCATGCTGACCGGTGACAATCCGCATACTGCGCAGGCCATTGCTGCCGTG > 2:1257765/1‑150 GACCGCTCCGGGCCACTGGCACTGTTCGCCGTGGCCGACACGGTCAAGGACAGCAGCCGTCAGGCGATCGCCGAATTGCATCAGCTGGGTATCAAGACTGTCATGCTGACCGGTGACAATCCGCATACTGCGCAGGCCATTGCTGCCGTG < 2:864258/150‑1 ACCGCTCCGGGCCACTGGCACTGTTCGCCGTGGCCGACACGGTCAAGGACAGCAGCCGTCAGGCGATCGCCGAATTGCATCAGCTGG > 1:1166299/1‑87 ACCGCTCCGGGCCACTGGCACTGTTCGCCGTGGCCGACACGGTCAAGGACAGCAGCCGTCAGGCGATCGCCGAATTGCATCAGCTGG < 2:1166299/87‑1 CCGCTCCGGGCCACTGGCACTGTTCGCCGTGGCCGACACGGTCAAGGACAGCAGCCGTCAGGCGATCGCCGAATTGCATCAGCTGGGTATCAAGACTGTCATGCTGACCGGTGACAATCCGCATACTGCGCAGGCCATTGCTGCCGTGGT < 1:752671/150‑1 GCTCCGGGCCACTGGCACTGTTCGCCGTGGCCGACACGGTCAAGGACAGCAGCCGTCAGGCGATCGCCGAATTGCATCAGCTGGGTATCAAGACTGTCATGCTGACCGGTGACAATCCGCATACTGCGCAGGCCATTGCTGCCGTGGTGG < 2:311989/150‑1 AGCTTGTCGGCCGGCAACAGGTTGCCCTCGGCGCGGTCGATTCCCACCACGGCAGCAATGGCCTGCGCAGTATGCGGATTGTCACCGGTCAGCATGACAGTCTTGATACCCAGCTGATGCAATTCGGCGATCGCCTGACGGCTGCTGTCCTTGACCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/5864324‑5864480 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cttgaccgCTCCGGGCCACTGGCACTGTTCGCCGTGGCCGACACGGTCAAGGACAGCAGCCGTCAGGCGATCGCCGAATTGCATCAGCTGGGTATCAAGACTGTCATGCTGACCGGTGACAATCCGCATACTGCGCAGGCCATTGCTGCCGTGGTGG < NC_002947/5864515‑5864367 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |