New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 775002 | 38 (0.770) | 4 (0.090) | 4/232 | NT | 10.6% | coding (171/363 nt) | PP_0666 | hypothetical protein |
? | NC_002947 | = 775029 | 32 (0.700) | coding (198/363 nt) | PP_0666 | hypothetical protein |
ACTGGCGGTCAGTTACAGGGGCCTGTTCGAAACGGCAGGCATCGTGGCCGAGGACCTGCAACAGGATGTGCAGGGGCAGTTGCGTCAGGCGCTGAGCGTGATCGACGGCCTGATGGTGCAAGCCAACGTCGGCAAGGCGCAGCTGACGCGGGTTCAGATGTGGCTTGCCGACTACCGCCACTTCGACCTGGTCAACGAAGTGTACGACGCCTGGTTGCAAGGCTGTGCAAAACCGGTGCGGGCCTGCGTGGGTGCCGACCTGGGGGCTGGCTACCTGGTAGAGGT > NC_002947/774867‑775151 | aCTGGCGGTCAGTTACAGGGGCCTGTTCGAAACGGCACGCAGCGTGGCCGAGGACCTGCAACAGGATGGGCAGGGGCAGTTGCGTGAGGCGCTGAGCGTGATCGACGTCGTGATGGTGCAAGCGAACGACGGCAGAGCGCGGCTGAcgcg > 2:1229461/1‑150 (MQ=255) tGGCGGTCAGTTACAGGGGCCTGTTCGAAACGGCAGGCATCGTGGCCGAGGACCTGCAACAGGATGTGCAGGGGCAGTTGCGTCAGGCGCTGAGCGTGATCGACGGCCTGATGGTGCAAGCCAACGTCGGCAAGccacatctgaacccgc > 1:10964‑M1/1‑134 (MQ=255) gTCAGTTACAGGGGCCTGTTCGAAACGGCAGGCATCGTGGCCGAGGACCTGCAACAGGATGTGCAGGGGCAGTTGCGTCAGGCGCTGAGCGTGATCGACGGCCTGATGGTGCAAGCCAACGTCGGCAAGGCGCAGCTGACGCGGGTTCAg > 2:315470/1‑150 (MQ=255) gTTACAGGGGCCTGTTCGAAACGGCAGGCATCGTGGCCGAGGACCTGCAACAGGATGTGCAGGGGCAGTTGCGTCAGGCGCTGAGCGTGATCGACGGCCTGATGGTGCAAGCCAACGTCGGCAAGGCGCAGCTGACGCGGGTTCAGAtgt < 1:1029727/150‑1 (MQ=255) gTTACAGGGGCCTGTTCGAAACGGCAGGCATCGTGGCCGAGGACCTGCAACAGGATGTGCAGGGGCAGTTGCGTCAGGCGCTGAGCGTGATCGACGGCCTGATGGTGCAAGCCAACGTCGGCAAGGCGCAGCTGACGCGGGTTCAGAtgt > 2:581649/1‑150 (MQ=255) gTTACAGGGGCCTGTTCGAAACGGCAGGCATCGTGGCCGAGGACCTGCAACAGGATGTGCAGGGGCAGTTGCGTCAGGCGCTGAGCGTGATCGACGGCCTGATGGTGCAAGCCAACGTCGGCAAGGCGCAGCTGACGCGGGTTCAGAtgt < 1:315470/150‑1 (MQ=255) aCAGGGGCCTGTTCGAAACGGCAGGCATCGTGGCCGAGGACCTGCAACAGGATGTGCAGGGGCAGTTGCGTCAGGCGCTGAGCGTGATCGACGGCCTGATGGTGCAAGCCAACGTCGGCAAGGCGCAGCTGACGCGGGTTCAGATGTGGc < 2:776538‑M2/150‑2 (MQ=255) aGGGGCCTGTTCGAAACGGCAGGCATCGTGGCCGAGGACCTGCAACAGGATGTGCAGGGGCAGTTGCGTCAGGCGCTGAGCGTGATCGACGGCCTGATGGTGCAAGCCAACGTCGGCAAGGCGCAGCTGACGCGGGTTCAGATGTGGctt < 1:1086852‑M2/150‑4 (MQ=255) tCGAAACGGCAGGCATCGTGGCCGAGGACCTGCAACAGGATGTGCAGGGGCAGTTGCGTCAGGCGCTGAGCGTGATCGACGGCCTGATGGTGCAAGCCAACGTCGGCAAGccacatctgaacccgcgtcagctgcgccttgccgacgttg < 2:10964‑M1/150‑41 (MQ=255) gAAACGGCATTCATCGTGGCCGAGGACCTGCAACAGGATGTGCAGGGGCAGTTGCGTCAGGAGCTGAGCGTGATCGACGGCCTGATGGTGCAAGCCAACGTCGGCAAGCCGCAGCTGACGGGGGTTCAGATGTGGCTTGCCGACTAcccc > 2:268708/1‑148 (MQ=255) gcaggcaTCGTGGCCGAGGACCTGCAACAGGATGTGCAGGGGCAGTTGCGTCAGGCGCTGAGCGTGATCGACGGCCTGATGGTGCAAGCCAACGTCGGCAAGGCGCAGCTGACGCGGGTTCAGATGTGGCTTGCCGACTACCGCCACTTc > 1:1177959/1‑150 (MQ=255) aTCGTGGCCGAGGACCTGCAACAGGATGTGCAGGGGCAGTTGCGTCAGGCGCTGAGCGTGATCGACGGCCTGATGGTGCAAGCCAACGTCGGCAAGGCGCAGCTGACGCGGGTTc < 1:634026/115‑1 (MQ=255) aTCGTGGCCGAGGACCTGCAACAGGATGTGCAGGGGCAGTTGCGTCAGGCGCTGAGCGTGATCGACGGCCTGATGGTGCAAGCCAACGTCGGCAAGGCGCAGCTGACGCGGGTTc > 2:634026/1‑115 (MQ=255) tCGTGGCCGAGGACCTGCAACAGGATGTGCAGGGGCAGTTGCGTCAGGCGCTGAGCGTGATCGACGGCCTGATGGTGCAAGCCAACGTCGGCAAGGCGCAGCTGACGCGGGTTCAGAtgtg < 1:240636/121‑1 (MQ=255) tCGTGGCCGAGGACCTGCAACAGGATGTGCAGGGGCAGTTGCGTCAGGCGCTGAGCGTGATCGACGGCCTGATGGTGCAAGCCAACGTCGGCAAGGCGCAGCTGACGCGGGTTCAGAtgtg > 2:240636/1‑121 (MQ=255) ccTGCAACAGGGTGTACAGATGCAGTGGCGTCAGTCGCGGAGCGTGATCGACGGCCTGATGGTGCAAGCCAACGTCGGCAAGGCGCAGCTGACGCGGGTTCAGATGTGGCTTGCCGACTACCGCCACTTCGACCTGGTCAACGAAGTGTa > 2:1042683/1‑150 (MQ=255) cAGGATGTGCAGAGGCAGTTGCGTCAGGCGCTGAGCGTGATCGACGGCCTGATGGTGCAAGCCAACGTCGGCAAGGCGCAGCTGACGCGGGTTCAGATGTGGCTTGCCGACTACCGCCACTTCGACCTGGTCAACGAAGTGTACGACGcc < 1:268708/150‑1 (MQ=255) gATGTGCAGGGGCAGTTGCGTCAGGCGCTGAGCGTGATCGACGGCCTGATGGTGCAAGCCAACGTCGGCAAGGCGCAGCTGACGCGGGTTCAGATGTGGCTTGCCGACTACCGCCACTTCGACCTGGTCAACGAAGTGTACGACGCCTgg > 2:1286777/1‑150 (MQ=255) aTGTGCAGGGGCAGTTGCGTCAGGCGCTGAGCGTGATCGACGGCCTGATGGTGCAAGCCAACGTCGGCAAGGCGCAGCTGACGCGGGTTCAGATGTGGCTTGCCGACTACCGCCACTTCGACCTGGTCAACGAAGTGTACGACGCCTGGt < 2:1086852/150‑1 (MQ=255) tgtgCAGGGGCAGTTGCGTCAGGCGCTGAGCGTGATCGACGGCCTGATGGTGCAAGCCAACGTCGGCAAGGCGCAGCTGACGCGGGTTCAGATGTGGCTTGCCGACTACCGCCACTTCGACCTGGTCAACGAAGTGTACGACGCCTGGtt < 1:776538/150‑1 (MQ=255) cAGTTGCGTCAGGCGCTGAGCGTGATCGACGGCCTGATGGTGCAAGCCAACGTCGGCAAGGCGCAGCTGACGCGGGTTCAGATGTGGCTTGCCGACTACCGCCACTTCGACCTGGTCAACGAAGTGTACGACGCCTGGTTGCAAGGCtgt < 2:383744/150‑1 (MQ=255) gTTGCGTCAGGCGCTGAGCGTGATCGACGGCCTGATGGTGCAAGCCAACGTCGGCAAGGCGCAGCTGACGCGGGTTCAGATGTGGCTTGCCGACTACCGCCACTTCGACCTGGTCAACGAAGTGTACGACGCCTGGTTGCAAGGCTGTGc > 2:284931/1‑150 (MQ=255) gTTGCGTCAGGCGCTGAGCGTGATCGACGGCCTGATGGTGCAAGCCAACGTCGGCAAGGCGCAGCTGACGCGGGTTCAGATGTGGCTTGCCGACTACCGCCACTTCGACCTGGTCAACGAAGTGTACGACGCCTGGTTGCAAGGCTGTGc > 2:1248956/1‑150 (MQ=255) aGGCGCTGAGCGTGATCGACGGCCTGATGGTGCAAGCCAACGTCGGCAAGGCGCAGCTGACGCGGGTTCAGATGTGGCTTGCCGACTACCGCCACTTCGACCTGGTCAACGAAGTGTACGACGCCTGGTTGCAAGGCTGTGCAAAACCgg > 1:305351/1‑150 (MQ=255) gcgcTGAGCGTGATCGACGGCCTGATGGTGCAAGCCAACGTCGGCAAGccacatctgaacccgcgtcagctgcgccttgccgacgttggcttgcaccatcaggccgt > 1:483024‑M1/1‑48 (MQ=255) gcgcTGAGCGTGATCGACGGCCTGATGGTGCAAGCCAACGTCGGCAAGccacatctgaacccgcgtcagctgcgccttgccgacgttggcttgcaccatcaggccgt < 2:483024‑M1/107‑60 (MQ=255) cgcTGAGCGTGATCGACGGCCTGATGGTGCAAGCCAACGTCGGCAAGGCGCAGCTGACGCGGGTTCAGATGTGGCTTGCCGACTACCGCCACTTCGACCTGGTCAACGAAGTGTACGACGCCt > 1:131352/1‑123 (MQ=255) cgcTGAGCGTGATCGACGGCCTGATGGTGCAAGCCAACGTCGGCAAGGCGCAGCTGACGCGGGTTCAGATGTGGCTTGCCGACTACCGCCACTTCGACCTGGTCAACGAAGTGTACGACGCCt < 2:131352/123‑1 (MQ=255) gcTGAGCGTGATCGACGGCCTGATGGTGCAAGCCAACGTCGGCAAGGCGCAGCTGACGCGGGTTCAGATGTGGCTTGCCGACTACCGCCACTTCGACCTGGTCAACGAAGTGTACGACGCCTGGTTGCAAGGCTGTGCAAAACCGGTGCg > 1:370097/1‑150 (MQ=255) cTGGGCGTGCTCGACGGCCTGATGGTGCAAGCCAACGTCGGCAAGGCGCAGCTGACGCGGGTTCAGATGTGGCTTGCCGCCTACCGCCACTTCGACCTGGTCAACGAAGTGTACGACGCCTGGTTGCAAGGCTGTGCAAAACCGGTGCgg < 1:472273/150‑1 (MQ=255) tCGACGGCCTGATGGTGCAAGCCAACGTCGGCAAGGCGCAGCTGACGCGGGTTCAGATGTGGCTTGCCGACTACCGCCACTTCGACCTGGTCAACGAAGTGTACGACGCCTGGTTGCAAGGCTGTGCAAAACCGGTGCGGGCCTGCGTgg < 1:1286777/150‑1 (MQ=255) aCGGCCTGATGGTGCAAGCCAACGTCGGCAAGGCGCAGCTGACGCGGGTTCAGATGTGGcttgccgacgttggcttgcaccatcaggccgtcgatcacgctcagcgc > 1:483024‑M2/1‑59 (MQ=255) aCGGCCTGATGGTGCAAGCCAACGTCGGCAAGGCGCAGCTGACGCGGGTTCAGATGTGGcttgccgacgttggcttgcaccatcaggccgtcgatcacgctcagcgc < 2:483024‑M2/107‑49 (MQ=255) gCCTGATGGTGCAAGCCAACGTCGGCAAGGCGCAGCTGACGCGGGTTCAGATGTGGCTTGCCGACTACCGCCACTTCGACCTGGTCAACGAAGTGTACGACGCCTGGTTGCAAGGCTGTGCAAAACCGGTGCGGGCCTGCGTGGGTGCCg > 2:1129419/1‑150 (MQ=255) ccTGATGGTGCAAGCCAACGTCGGCAAGGCGCAGCTGACGCGGGTTCAGATGTGGCTTGCCGACTACCGCCACTTCGACCTGGTCAACGAAGTGTACGACGCCTGGTTGCAAGGCTGTGCAAAACCGGTGCGGGCCTGCGTGGGTGCCGa > 1:497912/1‑150 (MQ=255) gATGGTGCAAGCCAACGTCGGCAAGGCGCAGCTGACGCGGGTTCAGATGTGGCTTGCCGACTACCGCCACTTCGACCTGGTCAACGAAGTGTACGACGCCTGGTTGCaa > 1:682820/1‑109 (MQ=255) gATGGTGCAAGCCAACGTCGGCAAGGCGCAGCTGACGCGGGTTCAGATGTGGCTTGCCGACTACCGCCACTTCGACCTGGTCAACGAAGTGTACGACGCCTGGTTGCaa < 2:682820/109‑1 (MQ=255) gggaaGCCCACGTGTGCAAGGTGAAGTGGATGCGGGTTCAGATGTGGCTTGCCCGCTACCGACTCTTCGACCTGGTCTAGGTTGTGGACGAGGTTTGGTATCTAGACAATGCAATACCGGTGCGGGCCCGAGTGGGTGCCGACCTgggtg < 2:44224/147‑3 (MQ=255) aaGCCAACGTCGGCAAGGCGCAGCTGACGCGGGTTCAGATGTGGCTTGCCGACTACCGCCACTTCGACCTGGTCAACGAAGTGTACGACGCCTGGTTGCAAGGCTGTGCAAAACCGGTGCGGGCCTGCGTGGGTGCCGACCTGGGggctg < 1:1129419/150‑1 (MQ=255) aGCCAACGTCGGCAAGGCGCAGCTGACGCGGGTTCAGATGTGGCTTGCCGACTACCGCCACTTCGACCTGGTCAACGAAGTGTACGACGCCTGGTTGCAAGGCTGTGCAAAACCGGTGCGGGCCTGCGTGGGTGCCGACCTGGGggctgg < 2:305351/150‑1 (MQ=255) cAACGTCGGCAAGGCGCAGCTGACGCGGGTTCAGATGTGGcttgccgacgttggcttgcaccatcaggccgtcgatcacgctcagcgcctgacgcaactgcccctgcacatcctgttgcaggtcctcggccacgatgcctgccgtttcga < 2:10964‑M2/150‑111 (MQ=255) cAACGTCGGCAAGGCGCAGCTGACGCGGGTTCAGATGTGGCTTGCCGACTACCGCCACTTCGACCTGGTCAACGAAGTGTACGACGCCTGGTTGCAAGGCTGTGCAAAACCGTTGCGGGCCTGCGTGGGTGCCGACCTGGGGGCTGGCTa > 1:1231738/1‑150 (MQ=255) aaCGTCGGCAAGGCGCAGCTGACGCGGGTTCAGATGTGGCTTGCCGAATACCGCCACTTCGACCTGGTCAACGAAGTGTACGACGCCTGGTTGCAAGGCTGTGCAAAACCGGTGCGGGCCTGCGTGGGTGCCGACCTGGGGGCTGGCTAc > 1:233771/1‑150 (MQ=255) aCGTCGGCAAGGCGCAGCTGACGCGGGTTCAGATGTGGCTTGCCGACTACCGCCACTTCGACCTGGTCAACGAAGTGTACGACGCCTGGTTGCAAGGCTGTGCAAAACCGGTGCGGGCCTGCGTGGGTGCCGACCTGGGGGCTGGCTAcc < 1:365746/150‑1 (MQ=255) cGTCGGCAAGGCGCAGCTGACGCGGGTTCAGATGTGGCTTGCCGACTACCGCCACTTCGACCTGGTCAACGAAGTGTACGACGCCTGGTTGCAAGGCTGTGCAAAACCGGTGCGGGCCTGCGTGGGTGCCGACCTGGGGGCTGGCTACCt < 1:388458/150‑1 (MQ=255) gTCGGCAAGGCGCAGCTGACGCGGGTTCAGATGTGGCTTGCCGACTACCGCCACTTCGACCTGGTCAACGAAGTGTACGACGCCTGGTTGCAAGGCTGTGCAAAACCGGTGCGGGCCTGCGTGGGTGCCGACCTGGGGGCTGGCTACCTg < 1:284931/150‑1 (MQ=255) ggCAAGGCGCAGCTGACGCGGGTTCAGATGTGGCTTGCCGACTACCGCCACTTCGACCTGGTCAACGAAGTGTACGACGCCTGGTTGCAAGGCTGTGCAAAACCGGTGCGGGCCTGCGTGGGTGCCGACCTGGGGGCTGGCTACCTGGTa < 2:1177959/150‑1 (MQ=255) aaGccacatctgaacccgcgtcagctgcgccttgccgacgttggcttgcaccatcaggccgtcgatcacgctcagcgcctgacgcaactgcccctgcacatcctgttgcaggtcctcggccacgatgcctgccgtttcgaacaggcccct < 1:1086852‑M1/150‑148 (MQ=255) ggCGCAGCTGACGCGGGTTCAGATGTGGCTTGCCGACTACCGCCACTTCGACCTGGTCAACGAAGTGTACGACGCCTGGTTGCAAGGCTGTGCAAAACCGGTGCGGGCCTGCGTGGGTGCCGACCTGGGGGCTGGCTACCTGGTAGAGGt > 1:615641/1‑150 (MQ=255) gccacatctgaacccgcgtcagctgcgccttgccgacgttggcttgcaccatcaggccgtcgatcacgctcagcgcctgacgcaactgcccctgcacatcctgttgcaggtcctcggccacgatgcctgccgtttcgaacaggcccctgt < 2:776538‑M1/150‑150 (MQ=255) | ACTGGCGGTCAGTTACAGGGGCCTGTTCGAAACGGCAGGCATCGTGGCCGAGGACCTGCAACAGGATGTGCAGGGGCAGTTGCGTCAGGCGCTGAGCGTGATCGACGGCCTGATGGTGCAAGCCAACGTCGGCAAGGCGCAGCTGACGCGGGTTCAGATGTGGCTTGCCGACTACCGCCACTTCGACCTGGTCAACGAAGTGTACGACGCCTGGTTGCAAGGCTGTGCAAAACCGGTGCGGGCCTGCGTGGGTGCCGACCTGGGGGCTGGCTACCTGGTAGAGGT > NC_002947/774867‑775151 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |