New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 = 158905864 (1.300)5 (0.110) 4/236 NT 7.4% coding (83/876 nt) PP_1393 transcriptional regulator
?NC_002947 = 1589076 64 (1.380)coding (65/876 nt) PP_1393 transcriptional regulator

GCAGCCAGTCCAGGCCTTCACGGGTCAGGCTCAACCCACGCGCCTCGCGCTTGAACAGGGCATAACCGAGGTGTTCTTCGAGGGCTGCAATCTGGCGGCTGACAGCGCCCTGGGTGATATGCAACTGCTGCCCGGCGCGGGTGAAGTTGCAGTGCTGGGCGGTGACCAGAAACGTGTGCAGGGCAGGCAGGGGCGGGAGACGTTTCATTGCAGTAAGCCATGATCAAAGGACATGGCTAGTATGTGTTTTTTTACATTGTGGCGATAGCCGTGGCTTGGGTCCAATAAGG  >  NC_002947/1588933‑1589222
                                                                                                                                               |                                                                                                                                                  
gCAGCCAGTCCAGGCCTTCACGGGTCAGGCTCAACCCACGCGCCTCGCGCTTGAACAGGGCATAACCGAGGTGTTCTTCGAGGGCTGCAATCTGGCGGCTGACAGCGCCCTGGGTGATATGCAACTGCTGCCCGGCGCGGGTGAagttgc                                                                                                                                              <  1:1091656‑M2/150‑7 (MQ=255)
gCAGCCAGTCCAGGCCTTCACGGGTCAGGCTCAACCCACGCGCCTCGCGCTTGAACAGGGCATAACCGAGGTGTTCTTCGAGGGCTGCAATCTGGCGGCTGACAGCGCCCTGGGTGATATGCAACTGCTGCCCGGCGCGGGTGAagttgc                                                                                                                                              <  2:565816‑M2/150‑7 (MQ=255)
  aGCCAGTCCAGGCCTTCACGGGTCAGGCTCAACCCACGCGCCTCGCGCTTGAACAGGGCATAACCGAGGTGTTCTTAGAAGGAGGCAATCTGGCGGCTGACAGCGCCCTGGGTGACACGCCCCTCCCCCCCCCCGCGGGTGAAGTTGCAg                                                                                                                                            >  1:80460/1‑150 (MQ=255)
        tCCAGGCCTTCCCGGGTCAGGCTCAACCCACGCGCCTCGCGCTTGAACAGGGCATAACCGAGGTGTTCTTCGAGGGCTGCAATCTGGCGGCTGACAGCGCCCTGGGTGATATGCAACTGCTGCCCGGCGCGGGTGAAGTTGCAGTGCTgg                                                                                                                                      <  1:363966/150‑1 (MQ=255)
          cAGGCCTTCACGGGTCAGGCTCAACCCACGCGCCTCGCGCTTGAACAGGGCATAACCGAGGTGTTCTTCGAGGGCTGCAATCTGGCGGCTGACAGCGCCCTGGGTGATATGCAACTGCTGCCCGGCGCGGGTGAAGTTGCAGTGCTGGGc                                                                                                                                    <  2:774915/150‑1 (MQ=255)
           aGGCCTTCACGGGTCAGGCTCAACCCACGCGCCTCGCGCTTGAACAGGGCATAACCGAGGTGTTCTTCGAGGGCTGCAATCTGGCGGCTGACAGCGCCCTGGGTGATATGCAACTGCTGCCCGGCGCGGGTGAAGTTGCCGTGCTGGGCg                                                                                                                                   >  2:614283/1‑150 (MQ=255)
           aGGCCTTCACGGGTCAGGCTCAACCCACGCGCCTCGCGCTTGAACAGGGCATAACCGAGGTGTTCTTCGAGGGCTGCAATCTGGCGGCTGACAGCGCCCTGGGTGATATGCAACTGCTGCCCGGCGCGGGTGAAGTTGCAGTGCTGGGCg                                                                                                                                   >  1:21002/1‑150 (MQ=255)
           aGGCCTTCACGGGTCAGGCTCAACCCACGCGCCTCGCGCTTGAACAGGGCATAACCGAGGTGTTCTTCGAGGGATGCAATCTGGCGGCTGACAGCGCCCTGGGTGATATGCAACTGCTGCCCGGCGCGGGTGAAGTTGCAGTGCTGGGCg                                                                                                                                   <  1:237021/150‑1 (MQ=255)
             gCCTTCACGGGTCAGGCTCAACCCACGCGCCTCGCGCTTGAACAGGGCATAACCGAGGTGTTCTTCGAGGGCTGCAATCTGGCGGCTGACAGCGCCCTGGGTGATATGCAACTGCTGCCCGGCGCGGGTGAATTTGCATTGCTGGGCGGt                                                                                                                                 <  2:437814/150‑1 (MQ=255)
             gCCTTCACGGGTCAGGCTCAACCCACGCGCCTCGCGCTTGAACAGGGCATAACCGAGGTGTTCTTCGAGGGCTGCAATCTGGCGGCTGACAGCGCCCTGGGTGATATGCAACTGCTGCCCGGCGCGGGTGAAGTTGCAGTGCTGGGCGGt                                                                                                                                 >  2:1249229/1‑150 (MQ=255)
                  cACGGGTCAGGCTCAACCCACGCGCCTCGCGCTTGAACAGGGCATAACCGAGGTGTTCTTCGAGGGCTGCAATCTGGCGGCTGACAGCGCCCTGGGTGATATGCAACTGCTGCCCGGCGCGGGTGAAGTTGCAGTGCTGGGCGGTGACCa                                                                                                                            <  2:854502/150‑1 (MQ=255)
                    cGGGTCAGGCTCAACCCACGCGCCTCGCGCTTGAACAGGGCATAACCGAGGTGTTCTTCGAGGGCTGCAATCTGGCGGCTGACAGCGCCCTGGGTGATATGCAACTGCTGCCCGGCGCGGGTGAAGTTGCAGTGCTGGGCGGTGACCAGa                                                                                                                          >  1:501127/1‑150 (MQ=255)
                       gTCAGGCTCAACCCACGCGCCTCGCGCTTGAACAGGGCATAACCGAGGTGTTCTTCGAGGGCTGCAATCTGGCGGCTGACAGCGCCCTGGGTGATATGCAACTGCTGCCCGGCGCGGGTGAAGTTGCAGTGCTGGGCGGTGACCAGAAAc                                                                                                                       >  2:386395/1‑150 (MQ=255)
                            gCTCAACCCACGCGCCTCGCGCTTGAACAGGGCATAACCGAGGTGTTCTTCGAGGGCTGCAATCTGGCGGCTGACAGCGCCCTGGGTGATATGCAACTGCTGCCCGGCGCGGGTGAAGTTGCAGTGCTGGGCGGTGACCAGAAACGtgtg                                                                                                                  <  1:131191/150‑1 (MQ=255)
                              tCAACCCACGCGCCTCGCGCTTGAACAGGGCATAACCGAGGTGTTCTTCGAGGGCTGCAATCTGGCGGCTGACAGCGCCCTGGGTGATATGCAACTGCTGCCCGGCGCGGGTGAAGTTGCAGTGCTGGGCGGTGACCAGAAACGTGTgca                                                                                                                <  2:202132/150‑1 (MQ=255)
                              tCAACCCACGCGCCTCGCGCTTGAACAGGGCATAACCGAGGTGTTCTTCGAGGGCTGCAATCTGGCGGCTGACAGCGCCCTGGGTGATATGCAACTGCTGCCCGGCGCGGGTGAAGTTGCAGTGCTGGGCGGTGACCAGAAACGTGTgca                                                                                                                >  1:1262546/1‑150 (MQ=255)
                               cAACCCACGCGCCTCGCGCTTGAACAGGGCATAACCGAGGTGTTCTTCGAGGGCTGCAATCTGGCGGCTGACAGCGCCCTGGGTGATATGCAACTGCTGCCCGGCGCGGGTGAAGTTGCAGTGCTGGGCGGTGACCAGAAACGTGTgcag                                                                                                               <  2:501127/150‑1 (MQ=255)
                                aaCCCACGCGCCTCGCGCTTGAACAGGGCATAACCGAGGTGTTCTTCGAGGGCTGCAATCTGGCGGCTGACAGCGCCCTGGGTGATATGCAACTGCTGCCCGGCGCGGGTGAAGTTGCAGTGCTGGGCGGTGACCAGAAACGTGTgcagg                                                                                                              <  2:1091656/150‑1 (MQ=255)
                                   ccACGCGCCTCGCGCTTGAACATGGCATAACCGAGGTGTTCTTCGAGGGCTGCAATCTGGCGGCTGACAGCGCCCTGGGTGATATGCAACTGCTGCCCGGCGCGGGTGAAGTTGCAGTGCTGGGCGGTGACCAGAAACGTGTgcagggca                                                                                                           <  1:615935/150‑1 (MQ=255)
                                   ccACGCGCCTCGCGCTTGAACAGGGCATAACCGAGGTGTTCTTCGAGGGCTGCAATCTGGCGGCTGACAGCGCCCTGGGTGATATGCAACTGCTGCCCGGCGCGGGTGAAGTTGCAGTGCTGGGCGGTGACCAGAAACGTGTgcagggca                                                                                                           >  2:64306/1‑150 (MQ=255)
                                    cACGCGCCTCGCGCTTGAACAGGGCATAACCGAGGTGTTCTTCGAGGGCTGCAATCTGGCGGCTGACAGCGCCCTGGGTGATATGCAACTGCTGCCCGGCGCGGGTGAAGTTGCAGTGCt                                                                                                                                        <  2:97981/120‑1 (MQ=255)
                                    cACGCGCCTCGCGCTTGAACAGGGCATAACCGAGGTGTTCTTCGAGGGCTGCAATCTGGCGGCTGACAGCGCCCTGGGTGATATGCAACTGCTGCCCGGCGCGGGTGAAGTTGCAGTGCt                                                                                                                                        >  1:97981/1‑120 (MQ=255)
                                    cACGCGCCTCGCGCTTGAACAGGGCATAACCGAGGTGTTCTTCGAGGGCTGCAATCTGGCGGCTGACAGCGCCCTGGGTGATATGCAACTGCTGCCCGGCGCGGGTGAAGTTGCAGTGCTGGGCGGTGACCAGAAACGTGTgcagggcag                                                                                                          >  2:201011/1‑150 (MQ=255)
                                         gcCTCGCGCTTGAACAGGGCATAACCGAGGTGTTCTTCGAGGGCTGCAATCTGGCGGCTGACAGCGCCCTGGGTGATATGCAACTGCTGCCCGGCGCGGGTGAAGTTGCAGTGCTGGGCGGTGACCAGAAACGTGTGCAGGGcaggcagg                                                                                                     >  2:560615/1‑150 (MQ=255)
                                              gcgcTTGAACAGGGCATAACCGAGGTGTTCTTCGAGGGCTGCAATCTGGCGGCTGACAGCGCCCTGGGTGATATGCAACTGCTGCCCGGCGCGGGTGAAGTTGCAGTGCTGGGCGGTGACCAGAAACGTGTGCAGGGCAGGCAGGGGCgg                                                                                                <  2:137621/150‑1 (MQ=255)
                                              gcgcTTGAACAGGGCATAACCGAGGTGTTCTTCGAGGGCTGCAATCTGGCGGCTGACAGCGCCCTGGGTGATATGCAACTGCTGCCCGGCGCGGGTGAAGTTGCAGTGCTGGGCGGTGACCAGAAACGTGTGCAGGGCAGGCAGGGGCgg                                                                                                >  1:137621/1‑150 (MQ=255)
                                              gcgcTTGAACAGGGCATAACCGAGGTGTTCTTCGAGGGCTGCAATCTGGCGGCTGACAGCGCCCTGGGTGATATGCAACTGCTGCCCGGCGCGGGTGAAGTTGCAGTGCTGGGCGGTGACCAGAAACGTGTGCAGGGCAGGCAGGGGCgg                                                                                                <  1:132424/150‑1 (MQ=255)
                                                  ttGAACAGGGCATAACCGAGGTGTTCTTCGAGGGCTGCAATCTGGCGGCTGACAGCGCCCTGGGTGATATGCAACTGCTGCCCGGCGCGGGTGAAGTTGCAGTGCTGGGCGGTGACCAGAAACGTGTGCAGGGCAGGCAGGGGCGGgaga                                                                                            >  2:417437/1‑150 (MQ=255)
                                                  ttGAACAGGGCATAACCGAGGTGTTCTTCGAGGGCTGCAATCTGGCGGCTGACAGCGCCCTGGGTGATATGCAACTGCTGCCCGGCGCGGGTGAAGTTGCAGTGCTGGGCGGTGACCAGAAACGTGTGCAGGGCAGGCAGGGGCGGgaga                                                                                            >  2:71790/1‑150 (MQ=255)
                                                   tGAACAGGGCATAACCGAGGTGTTCTTCGAGGGCTGCAATCTGGCGGCTGACAGCGCCCTGGGTGATATGCAACTGCTGCCCGGCGCGGGTGAAGTTGCAGTGCTGGGCGGTGACCAGAAACGTGTGCAGGGCAGGCAGGGGCGGGAGAc                                                                                           >  2:876575/1‑150 (MQ=255)
                                                   tGAACAGGGCATAACCGAGGTGTTCTTCGAGGGCTGCAATCTGGCGGCTGACAGCGCCCTGGGTGATATGCAACTGCTGCCCGGCGCGGGTGAAGTTGCAGTGCTGGGCGGTGACCAGAAACGTGTGCAGGGCAGGCAGGGGCGGGAGAc                                                                                           <  1:565816/150‑1 (MQ=255)
                                                       cAGGGCATAACCGAGGTGTTCTTCGAGGGCTGCAATCTGGCGGCTGACAGCGCCCTGGGTGATATGCAACTGCTGCCCGGCGCGGGTGAAGTTGCAGTGCTGGGCGGTGACCAGAAACGTGTGCAGGGCAGGCAGGGGCGGGAGACGttt                                                                                       <  2:726229/150‑1 (MQ=255)
                                                       cAGGGCATAACCGAGGTGTTCTTCGAGGGCTGCAATCTGGCGGCTGACAGCGCCCTGGGTGATATGCAACTGCTGCCCGGCGCGGGTGAAGTTGCAGTGCTGGGCGGTGACCAGAAACGTGTGCAGGGCAGGCAGGGGCGGGAGACGttt                                                                                       >  1:864941/1‑150 (MQ=255)
                                                         gggCATAACCGAGGTGTTCTTCGAGGGCTGCAATCTGGCGGCTGACAGCGCCCTGGGTGATATGCAACTGCTGCCCGGCGCGGGTGAAGTTGCAGTGCTGGGCGGTGACCAGAAACGTGTGCAGGGCAGGCAGGGGCGGGAGACGTTTCa                                                                                     <  1:952824/150‑1 (MQ=255)
                                                          ggCATAACCGAGGTGTTCTTCGAGGGCTGCAATCTGGCGGCTGACAGCGCCCTGGGTGATATGCAACTGCTGCCCGGCGCGGGTGAAGTTGCAGTGCTGGGCGGTGACCAGAAACGTGTGCAGGGCAGGCAGGGGCGGGAGACGTTTCAt                                                                                    >  1:843575/1‑150 (MQ=255)
                                                          ggCATAACCGAGGTGTTCTTCGAGGGCTGCAATCTGGCGGCTGACAGCGCCCTGGGTGATATGCAACTGCTGCCCGGCGCGGGTGAAGTTGCAGTGCTGGGCGGTGACCAGAAACGTGTGCAGGGCAGGCAGGGGCGGGAGACGTTTCAt                                                                                    >  2:195841/1‑150 (MQ=255)
                                                             aTAACCGAGGTGTTCTTCGAGGGCTGCAATCTGGCGGCTGACAGCGCCCTGGGTGATATGCAACTGCTGCCCGGCGCGGGTGAAGTTGCAGTGCTGGGCGGTGACCAGAAACGTGTGCAGGGCAGGCAGGGGCGGGAGACGTTTCATTGc                                                                                 <  2:1159672/150‑1 (MQ=255)
                                                              tAACCGAGGTGTTCTTCGAGGGCTGCAATCTGGCGGCTGACAGCGCCCTGGGTGATATGCAACTGCTGCCCGGCGCGGGTGAAGTTGCAGTGCTGGGCGGTGACCAGAAACGTGTGCAGGGCAGGCAGGGGCGGGAGACGTTTCATTGCa                                                                                <  1:201011/150‑1 (MQ=255)
                                                              tAACCGAGGTGTTCTTCGAGGGCTGCAATCTGGCGGCTGACAGCGCCCTGGGTGATATGCAACTGCTGCCCGGCGCGGGTGAAGTTGCAGTGCTGGGCGGTGACCAGAAACGTGTGCAGGGCAGGCAGGGGCGGGAGACGTTTCATTGCa                                                                                <  1:71790/150‑1 (MQ=255)
                                                              tAACCGAGGTGTTCTTCGAGGGCTGCAATCTGGCGGCTGACAGCGCCCTGGGTGATATGCAACTGCTGCCCGGCGCGGGTGAAGTTGCAGTGCTGGGCGGTGACCAGAAACGTGTGCAGGGCAGGCAGGGGCGGGAGACGTTTCATTGCa                                                                                <  1:560615/150‑1 (MQ=255)
                                                                  cGAGGTGTTCTTCGAGGGCTGCAATCTGGCGGCTGATAGCGCCCTGGGTGATATGCAACTGCTGCCCGGCGCGGGTGAAATTGCAGTGCTGGGCGGTGACCAGAAACGTGTGCAGGGCAGGCAGGGGCGGGAGACGTTTCATTGCAGTaa                                                                            >  2:427085/1‑150 (MQ=255)
                                                                         ttcttcGAGGGCTGCAATCTGGCGGCTGACAGCGCCCTGGGTGATATGCAACTGCTGCCCGGCGCGGGTGAAGTTGCAGTGCTGGGCGGTGACCAGAAACGTGTGCAGGGCAGGCAGGGGCGGGAGACGTTTCATTGCAGTAAg                                                                           <  1:334783/144‑1 (MQ=255)
                                                                         ttcttcGAGGGCTGCAATCTGGCGGCTGACAGCGCCCTGGGTGATATGCAACTGCTGCCCGGCGCGGGTGAAGTTGCAGTGCTGGGCGGTGACCAGAAACGTGTGCAGGGCAGGCAGGGGCGGGAGACGTTTCATTGCAGTAAg                                                                           >  2:334783/1‑144 (MQ=255)
                                                                          tcttcGAGGGCTGCAATCTGGCGGCTGACAGCGCCCTGGGTGATATGCAACTGCTGCCCGGCGCGGGTGAAGTTGCAGTGCTGGGCGGTGACCAGAAACGTGTGCAGGGCAGGCAGGGGCGGGAGACGTTTCATTGCAGTAAGCCATGAt                                                                    <  1:1097918/150‑1 (MQ=255)
                                                                               gAGGGCTGCAATCTGGCGGCTGACAGCGCCCTGGGTGATCGGGCACAGGTGCCCTGCGCGGGTGAAGTTGCAGTGCTGGGCGGTGACCAGAAACGTGTGCAGGGCAGGCAGGGGCGGGAGACGTTTCATTGCAGTAAGCCATGATCAAAg                                                               <  1:1249229/150‑1 (MQ=255)
                                                                                   gCTGCAATCTGGCGGCTGACAGCGCCCTGGGTGATATGCAACTGCTGCCCGGCGCGGGTGAAGTTGCAGTGCTGGGCGGTGACCAGAAACGTGTGCAGGGCAGGCAGGGGCGGGAGACGTTTCATTGCAGTAAGCCATGATCAAAGGACa                                                           <  1:876575/150‑1 (MQ=255)
                                                                                    cTGCAATCTGGCGGCTGACAGCGCCCTGGGTGATATGCAACTGCTGCCCGGCGCGGGTGAAGTTGCAGTGCTGGGCGGTGACCAGAAACGTGTGCAGGGCAGGCAGGGGCGGGAGACGTTTCATTGCAGTAAGCCATGATCAAAGGACAt                                                          <  2:1262546/150‑1 (MQ=255)
                                                                                     tGCAATCTGGCGGCTGACAGCGCCCTGGGTGATATGCAACTGCTGCCCGGCGGGGGTGAAGTTGCAGTGCTGGGCGGTGACCAGAAACGGGTGAAGGGCAGGCAGGGGCGGGAGACGTTTCATTGGAGTAAGCCATGATCAAAGGACATg                                                         >  2:624157/1‑150 (MQ=255)
                                                                                     tGCAATCTGGCGGCTGACAGCGCCCTGGGTGATATGCAACTGCTGCCCGGCGCGGGTGAAGTTGCAGTGCTGGGCGGTGACCAGAAACGTGTGCAGGGCAGGCAGGGGCGGGAGACGTTTCATTGCAGTAAGCCATGATCAAAGGACATg                                                         >  2:824815/1‑150 (MQ=255)
                                                                                       cAATCTGGCGGCTGACAGCGCCCTGGGTGATATGCAACTGCTGCCCGGCGCGGGTGAAGTTGCAGTGCTGGGCGGTGACCAGAAACGTGTGCAGGGCAGGCAGGGGCGGGAGACGTTTCATTGCAGTAAGCCATGATCAAAGGACATGGc                                                       <  2:754073/150‑1 (MQ=255)
                                                                                            tGGCGGCTGACAGCGCCCTGGGTGATATGCAACTGCTGCCCGGCGCGGGTGAAGTTGCAGTGCTGGGCGGTGACCAGAAACGTGTGCAGGGCAGGCAGGGGCGGGAGACGTTTCATTGCAGTAAGCCATGATCAAAGGACATGGCTAGTa                                                  >  2:361512/1‑150 (MQ=255)
                                                                                               cggcTGACAGCGCCCTGGGCGATATGCAACTGCTGCCCGGCGCGGGTGAAGTTGCAGTGCTGGGCGGTGACCAGAAACGTGTGCAGGGCAGGCAGGGGCGGGAGACGTTTCATTGCAGTAAGCCATGATCAAAGGACATGGCTAGTAtgt                                               <  2:843575/150‑1 (MQ=255)
                                                                                                ggcTGACAGCGCCCTGGGTGATATGCAACTGCTGCCCGGCGCGGGTGAAGTTGCAGTGCTGGGCGGTGACCAGAAACGTGTGCAGGGCAGGCAGGGGCGGGAGACGTTTCATTGCAGTAAGCCATGATCAAAGGACATGGCTAGTAtgtg                                              <  1:195841/150‑1 (MQ=255)
                                                                                                    gACAGCGCCCTGGGTGATATGCAACTGCTGCCCGGCGCGGGTGAAGTTGCAGTGCTGGGCGGTGACCAGAAACGTGTGCAGGGCAGGCAGGGGCGGGAGACGTTTCATTGCAGTAAGCCATGATCAAAGGACATGGCTAGTATGTGtttt                                          <  2:1046381/150‑1 (MQ=255)
                                                                                                       aGCGCCCTGGGTGATATGCAACTGCTGCCCGGCGCGGGTGAAGTTGCAGTGCTGGGCGGTGACCAGAAACGTGTGCAGGGCAGGCAGGGGCGGGAGACGTTTCATTGCAGTAAGCCATGATCAAAGGACATGGCTAGTATGTGttttttt                                       <  1:417437/150‑1 (MQ=255)
                                                                                                            ccTGGGTGATATGCAACTGCTGCCCGGCGCGGGTGAagttgcatatcacccagggcgctgtcagccgccagattgcagccctcgaagaacacctcggttatgccctgttcaagcgcgaggcgcgtgggttgagcctgacccgtgaaggcc                                  <  2:80840‑M2/150‑115 (MQ=255)
                                                                                                             cTGGGTGATATGCAACTGCTGCCCGGCGCGGGTGAAGTTGCAGTGCTGGGCGGTGACCAGAAACGTGTGCAGGGCAGGCAGGGGCGGGAGACGTTTCAtt                                                                                   <  1:1092910/100‑1 (MQ=255)
                                                                                                             cTGGGTGATATGCAACTGCTGCCCGGCGCGGGTGAAGTTGCAGTGCTGGGCGGTGACCAGAAACGTGTGCAGGGCAGGCAGGGGCGGGAGACGTTTCAtt                                                                                   >  2:1092910/1‑100 (MQ=255)
                                                                                                              tGGGTGATATGCAACTGCTGCCCGGCGCGGGTGAAGTTGCAGTGCTGGGCGGTGACCAGAAACGTGTGCAGGGCAGGCAGGGGCGGGAGACGTTTCATTGCAGTAAGCCATGATCAAAGGACATGGCTAGTATGTGTTTTTTTACATtgt                                >  2:989953/1‑150 (MQ=255)
                                                                                                               gggTGATATGCAACTGCTGCCCGGCGCGGGTGAAGTTGCAGTGCTGGGCGGTGACCAGAAACGTGTGCAGGGCAGGCAGGGGCGGGAGACGTTTCATTGCAGTAAGCCATGATCAAAGGACATGGCTAGTATGTGTTTTTTTACATtgtg                               <  1:599448/150‑1 (MQ=255)
                                                                                                               gggTGATATGCAACTGCTGCCCGGCGCGGGTGAAGTTGCAGTGCTGGGCGGTGACCAGAAACGTGTGCAGGGCAGGCAGGGGCGGGAGACGTTTCATTGCAGTAAGCCATGATCAAAGGACATGGCTAGTATGTGTTTTTTTACATtgtg                               <  1:989953/150‑1 (MQ=255)
                                                                                                               gggTGATATGCAACTGCTGCCCGGCGCGGGTGAAGTTGCAGTGCTGGGCGGTGACCAGAAACGTGTGCAGGGCAGGCAGGGGAGGGAGACGTTTCATTGCAGTAAGCCATGATCAAAGGACATGGCTAGTATGTGTTTTTTTACATtgtg                               >  1:379726/1‑150 (MQ=255)
                                                                                                                     tatGCAACTGCTGCCCGGCGCGGGTGAagttgcatatcacccagggcgctgtcagccgccagattgcagccctcgaagaacacctcggttatgccctgttcaagcgcgaggcgcgtgggttgagcctgacccgtgaaggcctggactggc                         <  2:232709‑M2/150‑124 (MQ=255)
                                                                                                                     tatGCAACTGCTGCCCGGCGCGGGTGAagttgcatatcacccagggcgctgtcagccgccagattgcagccctcgaagaacacctcggttatgccctgttcaagcgcgaggcgcgtgggttgag                                                   >  2:183162‑M2/1‑27 (MQ=255)
                                                                                                                     tatGCAACTGCTGCCCGGCGCGGGTGAagttgcatatcacccagggcgctgtcagccgccagattgcagccctcgaagaacacctcggttatgccctgttcaagcgcgaggcgcgtgggttgag                                                   <  1:183162‑M2/124‑98 (MQ=255)
                                                                                                                      atGCAACTGCTGCCCGGCGCGGGTGAAGTTGCAGTGCTGGGCGGTGACCAGAAACGTGTGCAGGGCAGGCAGGGGCGGGAGACGTTTCATTGCAGTAAGCCATGATCAAAGGACATGGCTAGTATGTGTTTTTTTACATTGTGGCGATAg                        >  1:183077/1‑150 (MQ=255)
                                                                                                                        gCAACTGATGCCCGGTGCGGGTGAAGTTGGAGTGCTGGGCGGTGACCAGAAACGTGTGCAGGGCAGGCAGGGGCGGGAGACGTTTCATTGCAGTAAGCCATGATCAAAGGACATGGCTAGTATGTGTTTTTTTACATTGTGGCGATAGcc                      <  2:301246/150‑1 (MQ=255)
                                                                                                                             tgctgcCCGGCGCGGGTGAagttgcctatcacccagggcgctgtcagccgccagattgcagccctcgaagaacacctcggttatgccctgttcaagcgcgaggcgcgtgggttgagcctgacccgtgaaggcctggactggctgccacgg                 >  1:80840‑M2/1‑19 (MQ=255)
                                                                                                                               ctgcCCGGCGCGGGTGAAGTTGCAGTGCTGGGCGGTGACCAGAAACGTGTGCAGGGCAGGCAGGGGCGGGAGACGTTTCATTGCAGTAAGCCATGATCAAAg                                                               >  2:51879/1‑102 (MQ=255)
                                                                                                                               ctgcCCGGCGCGGGTGAAGTTGCAGTGCTGGGCGGTGACCAGAAACGTGTGCAGGGCAGGCAGGGGCGGGAGACGTTTCATTGCAGTAAGCCATGATCAAAg                                                               <  1:51879/102‑1 (MQ=255)
                                                                                                                               ctgcCCGGCGCGGGTGAAGTTGCAGTGCTGGGCGGTGACCAGAAACGTGTGCAGGGCAGGCAGGGGCGGGAGACGTTTCATTGCAGTAAGCCATGATCAAAGGACATGGCTAGTATGTGTTTTTTTACATTGTGGCGATAGCCGTGGCtt               <  1:386395/150‑1 (MQ=255)
                                                                                                                               ctgcCCCGCTCGGGTGAAGTTGCAGTGCTCGGCGGTGACCAGAAACGTGTGCAGGGCAGGCAGGGGCGGGAGACGTTTTATTGCAGTAAGCCATGATCAAACGACATCGCTAGTATCTGTTTTTTTACATTGTGGCGATAGCCGTGGCtt               <  1:624157/150‑1 (MQ=255)
                                                                                                                                   ccGGCGCGGGTGAAGTTGCAGTGCTGGGCGGTGACCAGAAACGTGTGCAGGGCAGGCAGGGGCGGGAGACGTTTCATTGCAGTAAGCCATGATCAAAGGACATGGCTAGTATGTGTTTTTTTACATTGTGGCGATAGCCGTGGCtt               <  2:11350/146‑1 (MQ=255)
                                                                                                                                   ccGGCGCGGGTGAAGTTGCAGTGCTGGGCGGTGACCAGAAACGTGTGCAGGGCAGGCAGGGGCGGGAGACGTTTCATTGCAGTAAGCCATGATCAAAGGACATGGCTAGTATGTGTTTTTTTACATTGTGGCGATAGCCGTGGCtt               >  1:11350/1‑146 (MQ=255)
                                                                                                                                           ggTGAAGTTGCAGTGCTGGGCGGTGACCAGAAACGTGTGCAGGGCAGGCAGGGGCGGGAGACGTTTCATTGCAGTAAGCCATGATCAAAGGACATGGCTAGTATGTGTTTTTTTACATTGTGGCGATAGCCGTGGCTTGGGTCCAATAAg   >  1:192370/1‑150 (MQ=255)
                                                                                                                                            gTGAagttgcatatcacccagggcgctgtcagccgccagattgcagccctcgaagaacacctcggttatgccctgttcaagcgcgaggcgcgtgggttgagcctgacccgtgaaggcctggactggctgccacgggtgcagcaggtgttc  >  1:232709‑M2/1‑4 (MQ=255)
                                                                                                                                               |                                                                                                                                                  
GCAGCCAGTCCAGGCCTTCACGGGTCAGGCTCAACCCACGCGCCTCGCGCTTGAACAGGGCATAACCGAGGTGTTCTTCGAGGGCTGCAATCTGGCGGCTGACAGCGCCCTGGGTGATATGCAACTGCTGCCCGGCGCGGGTGAAGTTGCAGTGCTGGGCGGTGACCAGAAACGTGTGCAGGGCAGGCAGGGGCGGGAGACGTTTCATTGCAGTAAGCCATGATCAAAGGACATGGCTAGTATGTGTTTTTTTACATTGTGGCGATAGCCGTGGCTTGGGTCCAATAAGG  >  NC_002947/1588933‑1589222

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.