| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 2623058 = | 37 (0.750) | 4 (0.080) | 4/244 | NT | 11.9% | coding (184/333 nt) | PP_5517 | hypothetical protein |
| ? | NC_002947 | 2623092 = | 23 (0.480) | coding (218/333 nt) | PP_5517 | hypothetical protein | |||||
GGCGCAATGGCGAGACGTAAGTTACAACGGCGTCATTCCCGCAGACTATGTTTACTGCAACAAGCAGAGCGACCTTGACGCGTTCGGGGCCGTTGCCCAGGACGGCGATCAAGCGGGCGCTGACCGGCTTGTGAGCCAGGGTCGCTGCCACGTCAGTTCGGGGATGCGTGTGGAGGTGTTCCAACAGAATGAGTACGCGGTCACCTTCCTTTCTCCGAGTGGTCGAGCCTTCTACACCTACACCAAGTTCGTGAGGAAGCGCTGACGCAAGTCATACGCAATCACACCTCAAGGGGC > NC_002947/2622943‑2623239 | ggCGCAATGGCGAGACGTAAGTTACAACGGCGTCATTCCCGCAGACTATGTTTACTGCAACAAGCAGAGCGACCTTGACGCGTTCGGGGCCGTTGCCCAGGACGGCGATCAAGCGGGCGCTGACCGGCTTGTGAGCCAGGGTCGCTGCCa < 1:49980/150‑1 (MQ=255) gcgcAATGGCGAGACGTAAGTTACAACGGCGTCATTCCCGCAGACTATGTTTACTGCAACAAGCAGAGCGACCTTGACGCGTTCGGGGCCGTTGCCCAGGACGGCGATCAAGCGGGCGCTGACCGGCTTGTGAGCCAGGGTCGCTGCCAc < 1:153728/150‑1 (MQ=255) gcgcAATGGCGAGACGTAAGTTACAACGGCGTCATTCCCGCAGACTATGTTTACTGCAACAAGCAGAGCGACCTTGACGCGTTCGGGGCCGTTGCCCAGGACGGCGATCAAGCGGGCGCTGACCGGCTTGTGAGCCAGGGTCGCTGCCAc < 2:566552/150‑1 (MQ=255) gcgcAATGGCGAGACGTAAGTTACAACGGCGTCATTCCCGCAGACTATGTTTACTGCAACAAGCAGAGCGACCTTGACGCGTTCGGGGCCGTTGCCCAGGACGGCGATCAAGCGGGCGCTGACCGGCTTGTGAGCCAGGGTCGCTGCCAc < 2:1025278/150‑1 (MQ=255) cGTAAGTTACAACGGCGTCATTCCCGCAGACTATGTTTACTGCAACAAGCAGAGCGACCTTGACGCGTTCGGGGCCGTTGCCCAGGACGGCGATCAAGCGGGCGCTGACCGGCTTGTGAGCCAGGGTCGCTGCCACGTCAGTTCGGGGAt > 1:791781/1‑150 (MQ=255) aaCGGCGTCATTCCCGCAGACTATGTTTACTGCAACAAGCAGAGCGACCTTGACGCGTTCGGGGCCGTTGCCCAGGACGGCGATCAAGCGGGCGCTGACCGGCTTGTGAGCCAGGGTCGCTGCCACGTCAGTTCGGGGATGCGTGTGGAg < 1:1075402/150‑1 (MQ=255) cGGCGTCATTCCCGCAGACTATGTTTACTGCAACAAGCAGAGCGACCTTGACGCGTTCGGGGCCGTTGCCCAGGACGGCGATCAAGCGGGCGCTGACCGGCTTGTGAGCCAGGGTCGCTGCCACGTCAGTTCGGGGATGCGTGTGGAGgt < 2:613280/150‑1 (MQ=255) ggCGTCATTCCCGCAGACTATGTTTACTGCAACAAGCAGAGCGACCTTGACGCGTTCGGGGCCGTTGCCCAGGAAGGCGATCAAGCGGGCGCTGACCGGCTTGTGAGCCAGGGTCGCTGCCACGTCAGTTCGGGGATGCGTGTGGAGgtg > 2:744764/1‑150 (MQ=255) ttCCCGCAGACTATGTTTACTGCAACAAGCAGAGCGACCTTGACGCGTTCGGGGCCGTTGCCCAGGACGGCGATCAAGCGGGCGCTGACCGGCTTGTGAGCCAGGGTCGCTGCCACGTCAGTTCGGGGATGCGTGTGGAGGTGTTCCAAc > 2:1072522/1‑150 (MQ=255) tCCCGCAGACTATGTTTACTGCAACAAGCAGAGCGACCTTGACGCGTTCGGGGCCGTTGCCCAGGACGGCGATCAAGCGGGCGCTGACCGGCTTGTGAGCCAGGGTCGCTGCCACGTCAGTTCGGGGATGCGTGTGGAGGTGTTCCAACa < 2:1099447/150‑1 (MQ=255) tCCCGCAGACTATGTTTACTGCAACAAGCAGAGCGACCTTGACGCGTTCGGGGCCGTTGCCCAGGACGGCGATCAAGCGGGCGCTGACCGGCTTGTGAGCCAGGGTCGCTGCCACGTCAGTTCGGGGATGCGTGTGGAGGTGTTCCAACa < 1:744764/150‑1 (MQ=255) cGCAGACTATGTTTACTGCAACAAGCAGAGCGACCTTGACGCGTTCGGGGCCGTTGCCCAGGACGGCGATCAAGCGGGCGCTGACCGGCTTGTGAGCCAGGGTCGCTGCCACGTCAGTTCGGGGATGCGTGTGGAGGTGTTCCAACAGaa < 2:1136817/150‑1 (MQ=255) aGACTATGTTTACTGCAACAAGCAGAGCGACCTTGACGCGTTCGGGGCCGTTGCCCAGGACGGCGATCAAGCGGGCGCTGACCGGCTTGTGAGCCAGGGTCGCTGCCACGTCAGGTCGGGGATGCGTGTGGAGGTGTTCCAACAGAATGa < 2:1110853/150‑1 (MQ=255) actcggagaaaggaaggtgaccgcgtactcattctgttggaacacctccacacgcatccccgaactgacgtGGCGCTGACCGGCTTGTGAGCCAGGGTCGCTGCCACGt > 1:793556‑M1/72‑109 (MQ=255) actcggagaaaggaaggtgaccgcgtactcattctgttggaacacctccacacgcatccccgaactgacgtGGCGCTGACCGGCTTGTGAGCCAGGGTCGCTGCCACGt < 2:793556‑M1/38‑1 (MQ=255) gTTTACTGCAACAAGCAGAGCGACCTTGACGCGTTCGGGGCCGTTGCCCAGGACGGCGATCAAGCGGGCGCTGACCGGCTTGTGAGCCAGGGTCGCTGCCACGTCAGTTCGGGGATGCGTGTGGAGGTGTTCCAACAGAATGAGTAcgcg < 2:909628/150‑1 (MQ=255) gaaaggaaggtgaccgcgtactcattctgttggaacacctccacacgcatccccgaactgacgtGGCGCTGACCGGCTTGTGAGCCAGGGTCGCTGCCACGTCa > 1:95229‑M1/65‑104 (MQ=255) gaaaggaaggtgaccgcgtactcattctgttggaacacctccacacgcatccccgaactgacgtGGCGCTGACCGGCTTGTGAGCCAGGGTCGCTGCCACGTCa < 2:95229‑M1/40‑1 (MQ=255) aacaaGCAGAGCGACCTTGACGCGTTCGGGGCCGTTGCCCAGGACGGCGATCAAGCGGGCGCTGACCGGCTTGTGAGCCAGGGTCGCTGCCACGTCAGTTCGGGGATGCGTGTGGAGGTGTTCCAACAGAATGAGTACGCGGTCAccttc < 1:677289/150‑1 (MQ=255) acaaGCAGAGCGACCTTGACGCGTTCGGGGCCGTTGCCCAGGACGGCGATCAAGCGGGCGCTGACCGGCTTGTGAGCCAGGGTCGCTGCCACGTCAGTTCGGGGATGCGTGTGGAGGTGTTCCAACAGAATGAGTACGCGGTCAccttcc > 1:152980/1‑150 (MQ=255) gCGACCTTGACGCGTTCGGGGCCGTTGCCCAGGACGGCGATCAAGCGGGCGCTGACCGGCTTGTGAGCCAGGGTCGCTGCCACGTCAGTTCGGGGATGCGTGTGGAGGTGTTCCAACAGAATGAGTACGCGGTCACCTTCCTTTCTCCGa < 1:1072522/150‑1 (MQ=255) cGGGGCCGTTGCCCAGGACGGCGATCAAGCGGGCGCTGACCGGCTTGTGAGCCAGGGTCGCTGCCACGTCAGTTCGGGGATGCGTGTGGAGGTGTTCCAACAGAATGAGTACGCGGTCACCTTCCTTTCTCCGAGTGGTCGAGCCTTcta < 2:829022/150‑1 (MQ=255) gTTGCCCAGGACGGCGATCAAGCGGGCGCTGACCGGCTTGTGAGCCAGGGTCGCTGCCACGTCAGTTCGGGGATGCGTGTGGAGGTGTTCCAACAGAATGAGTACGCGGTCACCTTCCTTTCTCCGAGTGGTTGAGCCTTctacacctac < 2:272182/150‑1 (MQ=255) gACGGCGATCAAGCGGGCGCTGACCGGCTTGTGAGCCAGGGTCGCTGCCACGTCAGTTCGGGGATGCGTGTGGAGGTGTTCCAACAGAATGAGTACGCGGTCACCTTCCTTTCTCCGAGTGGTCGAGCCTTCTACACCTACACCAAGTTc < 2:152980/150‑1 (MQ=255) gCGATCAAGCGGGCGCTGACCGGCTTGTGAGCCAGGGTCGCTGCCACGTCAGTTAGGGGATGCGTGTGGAGGTGTTCCAACAGAATGAGTACGCGGTCACCTTCCTTTCTCCGAGTGGTCGAGCCTTCTACACCTACACCAAGTTCGTGa < 2:1078330/150‑1 (MQ=255) tgacgtggcagcgaccctggctcacaagccggtcagcgccACGTCAGTTCGGGGATGCGTGTGGAGGTGTTCCAACAGAATGAGTACGCGGTCACCTTCCTTtc > 1:95229‑M2/41‑104 (MQ=255) tgacgtggcagcgaccctggctcacaagccggtcagcgccACGTCAGTTCGGGGATGCGTGTGGAGGTGTTCCAACAGAATGAGTACGCGGTCACCTTCCTTtc < 2:95229‑M2/64‑1 (MQ=255) acgtggcagcgaccctggctcacaagccggtcagcgccACGTCAGTTCGGGGATGCGTGTGGAGGTGTTCCAACAGAATGAGTACGCGGTCACCTTCCTTTCTCCGAGt > 1:793556‑M2/39‑109 (MQ=255) acgtggcagcgaccctggctcacaagccggtcagcgccACGTCAGTTCGGGGATGCGTGTGGAGGTGTTCCAACAGAATGAGTACGCGGTCACCTTCCTTTCTCCGAGt < 2:793556‑M2/71‑1 (MQ=255) GGCGCTGACCGGCTTGTGAGCCAGGGTCGCTGCCACGTCAGTTCGGGGATGCGTGTGGAGGTGTTCCAACAGAATGAGTACGCGGTCACCTTCCTTTCTCCGAGTGGTCGAGCCTTCTACACCTACACCAAGTTCGTGAGGAAGCGCTGa > 2:791781‑M1/1‑150 (MQ=255) ccGGCTTGTGAGCCAGGGTCGCTGCCACGTCAGTTCGGGGATGCGTGTGGAGGTGTTCCAACAGAATGAGTACGCGGTCAccttcct > 2:650151/1‑87 (MQ=255) ccGGCTTGTGAGCCAGGGTCGCTGCCACGTCAGTTCGGGGATGCGTGTGGAGGTGTTCCAACAGAATGAGTACGCGGTCAccttcct < 1:650151/87‑1 (MQ=255) cGGCTTGTGAGCCAGGGTCGCTGCCACGTCAGTTCGGGGATGCGTGTGGAGGTGTTCCAACAGAATGAGTACGCGGTCACCTTCCTTTCTCCGAGTGGTCGAGCCTTCTACACCTACACCAAGTTCGTGAGGAAGCGCTGACGCAAGTCa > 2:1085257/1‑150 (MQ=255) ttGTGAGCCAGGGTCGCTGCCACGTCAGTTCGGGGATGCGTGTGGAGGTGTTCCAACAGAATGAGTACGCGGTCACCTTCCTTTCTCCGAGTGGTCGAGCCTTCTACACCTACACCAAGTTCGTGAGGAAGCGCTGACGCAAGTCATACg > 2:1088832/1‑150 (MQ=255) tgAGCCAGGGTCGCTGCCACGTCAGTTCGGGGGTGCGTGTGGAGGTGTTCCAACAGAATGAGTACGCGGTCACCTTCCTTTCTCCGAGTGGTCGAGCCTTCTACACCTACACCAAGTTCGTGAGGAAgcgc > 1:834451/1‑131 (MQ=255) tgAGCCAGGGTCGCTGCCACGTCAGTTCGGGGGTGCGTGTGGAGGTGTTCCAACAGAATGAGTACGCGGTCACCTTCCTTTCTCCGAGTGGTCGAGCCTTCTACACCTACACCAAGTTCGTGAGGAAgcgc < 2:834451/131‑1 (MQ=255) gCTGCCACGTCAGTTCGGGGATGCGTGTGGAGGTGTTCCAACAGAATGAGTACGCGGTCACCTTCCTTTCTCCGAGTGGTCGAGCCTTCTACACCTACACCAAGTTCGTGAGGAAGCGCTGACGCAAGTCATACGCAATCACACCTCAAg > 1:1224574/1‑150 (MQ=255) tGCCACGTCAGTTCGGGGATGCGTGTGGAGGTGTTCCAACAGAATGAGTACGCGGTCACCTTCCTTTCTCCGAGTGGTCGAGCCTTCTACACCTACACCAAGTTCGTGAGGAAGCGCTGACGCAAGTCATACGCAATCACACCTCAAggg > 1:1035219/1‑150 (MQ=255) ccACGTCAGTTCGGGGATGCGTGTGGAGGTGTTCCAACAGAATGAGTACGCGGTCACCTTCCTTTCTCCGAGTGGTCGAGCCTTCTACACCTACACCAAGTTCGTGAGGAAGCGCTGACGCAAGTCATACGCAATCACACCTCAAGGGGc < 1:233543‑M2/148‑1 (MQ=255) | GGCGCAATGGCGAGACGTAAGTTACAACGGCGTCATTCCCGCAGACTATGTTTACTGCAACAAGCAGAGCGACCTTGACGCGTTCGGGGCCGTTGCCCAGGACGGCGATCAAGCGGGCGCTGACCGGCTTGTGAGCCAGGGTCGCTGCCACGTCAGTTCGGGGATGCGTGTGGAGGTGTTCCAACAGAATGAGTACGCGGTCACCTTCCTTTCTCCGAGTGGTCGAGCCTTCTACACCTACACCAAGTTCGTGAGGAAGCGCTGACGCAAGTCATACGCAATCACACCTCAAGGGGC > NC_002947/2622943‑2623239 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |