New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 = 441724157 (1.160)3 (0.060) 3/236 NT 4.8% coding (90/552 nt) PP_3905 LuxR family transcriptional regulator
?NC_002947 = 4417285 65 (1.400)coding (134/552 nt) PP_3905 LuxR family transcriptional regulator
Rejected: Frequency below/above cutoff threshold.

TACCACGGCCCGGCGTGGCTAAACATCCGGGCACCATCAATATGCCACCACACGCTGGTGGTCCGATCGACCTGGTTCCCCATCACCAGGCTGCATCGGTCGTGGCGTTCGCCCTCCCCTGGTCCGGGAGGTTCATGGCAGCGAGCGTCACGACCAATGCAGCCCACCCCCGAGATCAAATCATGGACACGATCACTATCGGCGCATGGATAGGCCATCTCGGCCGAGGCCTGGCGCCTCGCGAACTGCAATGCCTGTTGGAAGTAGCCCAGGGCTTCACCACCAAGGAAATC  >  NC_002947/4417138‑4417430
                                                                                                                                                   |                                                                                                                                                 
tACCACGGCCCGGCGTGGCTAAACATCCGGGCACCATCAATATGCCACCACACGCTGGTGGTCCGATCGACCTGGTTCCCCATCACCAGGCTGCATCGGTCGTGGCGTTCGCCCTCCCCTGGTCCGGGAGGTTCATGGCAGCGAGCGTca                                                                                                                                                 <  1:186099‑M2/150‑3 (MQ=255)
tACCACGGCCCGGCGTGGCTAAACATCCGGGCACCATCAATATGCCACCACACGCTGGTGGTCCGATCGACCTGGTTCCCCATCACCAGGCTGCATCGGTCGTGGCGTTCGCCCTCCCCTGGTCCGGGAGGTTCATGGCAGCGAGCGTca                                                                                                                                                 <  1:884770‑M2/150‑3 (MQ=255)
tACCACGGCCCGGCGTGGCTAAACATCCGGGCACCATCAATATGCCACCACACGCTGGTGGTCCGATCGACCTGGTTCCCCATCACCAGGCTGCATCGGTCGTGGCGTTCGCCCTCCCCGAGTCCGGGAGGTTCATGGCAGCGAGCGTcg                                                                                                                                                 <  1:356571‑M2/150‑3 (MQ=255)
 aCCACGGCCCGGCGTGGCTAAACATCCGGGCACCATCAATATGCCACCACACGCTGGTGGTCCGATCGACCTGGTTCCCCATCACCAGGCTGCATCGGTCGTGGCGTTCGCCCTCCCCTGGTCCGGGAGGTTCATGGCAGCGAGCGTcac                                                                                                                                                >  2:706666‑M2/1‑147 (MQ=255)
 aCCACGGCCCGGCGTGGCTAAACATCCGGGCACCATCAATATGCCACCACACGCTGGTGGTCCGATCGACCTGGTTCCCCATCACCAGGCTGCATCGGTCGTGGCGTTCGCCCTCCCCTGGTCCGGGAGGTTCATGGCAGCGAGCGTcac                                                                                                                                                >  2:884770‑M2/1‑147 (MQ=255)
                   tAAACATCCGGGCACCATCAATATGCCACCACACGCTGGTGGTCCGATCGACCTGGTTCCCCATCACCAGGCTGCATCGGTCGTGGCGTTCGCCCTCCCCTGGTCCGGGAGGTTCATGGCAGCGAGCGTCACGACCAATGCAGCCCAccc                                                                                                                              >  1:1172579/1‑150 (MQ=255)
                   tAAACATCCGGGCACCATCAATATGCCACCACACGCTGGTGGTCCGATCGACCTGGTTCCCCATCACCAGGCTGCATCGGTCGTGGCGTTCGCCCTCCCCTGATGCGGGAGGTTCATGGCAGCGAGCGTCACGACCAATGCAGCCCAccc                                                                                                                              >  1:1104080/1‑150 (MQ=255)
                     aaCATCCGGGCACCATCAATATGCCACCACACGCTGGTGGTCCGATCGACCTGGTTCCCCATCACCAGGCTGCATCGGTCGTGGCGTTCGCCCTCCCCTGGTCCGGGAGGTTCATGGCAGCGAGCGTCACGACCAATGCAGCCCAccccc                                                                                                                            >  1:61930/1‑150 (MQ=255)
                       cATCCGGGCACCATCAATATGCCACCACACGCTGGTGGTCCGATCGACCTGGTTCCCCATCACCAGGCTGCATCGGTCGTGGCGTTCGCCCTTCCCTGGCCCGGGAGGTTCATGGCAGCGAGCGTCACGACCAATGCAGCCCACCCCCga                                                                                                                          <  2:827033/150‑1 (MQ=255)
                        aTCCGGGCACCATCAATATGCCACCACACGCTGGTGGTCCGATCGACCTGGTTCCCCATCACCAGGCTGCATCGGTCGTGGCGTTCGCCCTCCCCTGGTCCGGGAGGTTCATGGCAGCGAGCGTCACGACCAATGCAGCCCACCCCCgag                                                                                                                         >  2:207081/1‑150 (MQ=255)
                        aTCCGGGCACCATCAATATGCCACCACACGCTGGTGGTCCGATCGACCTGGTTCCCCATCACCAGGCTGCATCGGTCGTGGCGTTCGCCCTCCCCTGGTCCGGGAGGTTCATGGCAGCGAGCGTCACGACCAATGCAGCCCACCCCCgag                                                                                                                         >  2:342095/1‑150 (MQ=255)
                         tCCGGGCACCATCAATATGCCACCACACGCTGGTGGTCCGATCGACCTGGTTCCCCATCACCAGGCTGCATCGGTCGTGGCGTTCGCCCTCCCCTGGTCCGGGAGGTTCATGGCAGCGAGCGTCACGACCAATGCAGCCCACCCCCgaga                                                                                                                        <  1:342095/150‑1 (MQ=255)
                              gCACCATCAATATGCCACCACACGCTGGTGGTCCGATCGACCTGGTTCCCCATCACCAGGCTGCATCGGTCGTGGCGTTCGCCCTCCCCTGGTCCGGGAGGTTCATGGCAGCGAGCGTCACGACCAATGCAGCCCACCCCCGAGATCaaa                                                                                                                   <  2:256394/150‑1 (MQ=255)
                              gCAACATCAATATGCCACCACACGCTGGGGGTCCGATCGACCTGGCTCCCCATCACCAGGCTGCATCGGCCGTGGCGTTCGCCCTCCCCTGGTCCGCGAGGATCATGGCAGCGAGCGTCACGACCAATGCAGCCCACCCCCGAGATCaaa                                                                                                                   >  2:49933/1‑150 (MQ=37)
                                aCCATCAATATGCCACCACACGCTGGTGGTCCGATCGACCTGGTTCCCCATCACCAGGCTGCATCGGTCGTGGCGTTCGCCCTCCCCTGGTCCGGGAGGTTCATGGCAGCGAGCGTCACGACCAATGCAGCCCACCCCCGAGATCAAATc                                                                                                                 >  1:1234669/1‑150 (MQ=255)
                                  cATCAATATGCCACCACACGCTGGTGGTCCGATCGACCTGGTTCCCCATCACCAGGCTGCATCGGTCGTGGCGTTCGCCCTCCCCTGGTCCGGGAGGTTCATGGCAGCGAGCGTCACGACCAATGCAGCCCACCCCCGAGATCAAATCAt                                                                                                               >  1:581401/1‑150 (MQ=255)
                                  cATCAATATGCCACCACACGCTGGTGGTCCGATCGACCTGGTTCCCCATCACCAGGCTGCATCGGTCGTGGCGTTCGCCCTACCCTGGTCCGGGAGGTTCATGGCAGCGAGCGTCACGACCAATGCAGCCCACCCCCGAGATCAAATCAt                                                                                                               <  2:457829/150‑1 (MQ=255)
                                   aTCAATATGCCACCACACGCTGGTGGTCCGATCGACCTGGTTCCCCATCACCAGGCTGCATCGGTGGTGGCGTTCGCCCTCCCCTGGTCCGGGAGGTTCATGGCAGCGAGCGTCACGACCAATGGAGCCCAGCCCCGGGATCAAATCATg                                                                                                              >  2:206489/1‑150 (MQ=255)
                                   aTCAATATGCCACCACACGCTGGTGGTCCGATCGACCTGGTTCCCCATCACCAGGCTGCATCGGTCGTGGCGTTCGCCCTCCCCTGGTCCGGGAGGTTCATGGCAGCGAGCGTCACGACCAATGCAGCCCACCCCCGAGATCAAATCATg                                                                                                              >  1:406579/1‑150 (MQ=255)
                                         atGCCACCACACGCTGGTGGTCCGATCGACCTGGTTCCCCATCACCAGGCTGCATCGGTCGTGGCGTTCGCCCTCCCCTGGTCCGGGAGGTTCATGGCAGCGAGCGTCACGACCAATGCAGCCCACCCCCGAGATCAAATCATGGACACg                                                                                                        >  2:923093/1‑150 (MQ=255)
                                          tGCCACCACACGCTGGTGGTCCGATCGACCTGGTTCCCCATCACCAGGCTGCATCGGTCGTGGCGTTCGCCCTCCCCTGGTCCGGGAGGTTCATGGCAGCGAGCGTCACGACCAATGCAGCCCACCCCCGAGATCAAATCATGGACACGa                                                                                                       <  1:787862/150‑1 (MQ=255)
                                            ccaccaCACGCTGGTGGTCCGATCGACCTGGTTCCCCATCACCAGGCTGCATCGGTCGTGGCGTTCGCCCTCCCCTGGTCCGGGAGGTTCATGGCAGCGAGCGTCACGACCAATGCAGCCCACCCCCGAGATCAAATCATGGACACGATc                                                                                                     <  1:207081/150‑1 (MQ=255)
                                             caccacACGCTGGTGGTCCGATCGACCTGGTTCCCCATCACCAGGCTGCATCGGTCGTGGCGTTCGCCCTCCCCTGGTCCGGGAGGTTCATGGCAGCGAGCGTCACGACCAATGCAGCCCACCCCCGAGATCAAATCATg                                                                                                              <  1:401475/140‑1 (MQ=255)
                                             caccacACGCTGGTGGTCCGATCGACCTGGTTCCCCATCACCAGGCTGCATCGGTCGTGGCGTTCGCCCTCCCCTGGTCCGGGAGGTTCATGGCAGCGAGCGTCACGACCAATGCAGCCCACCCCCGAGATCAAATCATg                                                                                                              >  2:401475/1‑140 (MQ=255)
                                                cacaCGCTGGTGGTCCGATCGACCTGGTTCCCCATCACCAGGCTGCATCGGTCGTGGCGTTCGCCCTCCCCTGGTCCGGGAGGTTCATGGCAGCGAGCGTca                                                                                                                                                 >  1:53271‑M2/1‑100 (MQ=255)
                                                cacaCGCTGGTGGTCCGATCGACCTGGTTCCCCATCACCAGGCTGCATCGGTCGTGGCGTTCGCCCTCCCCTGGTCCGGGAGGTTCATGGCAGCGAGCGTca                                                                                                                                                 <  2:53271‑M2/102‑3 (MQ=255)
                                                      ttggtggTCCGATCGACCTGGTTCCCCATCACCAGGCTGCATCGGTCGTGGCGTTCGCCCTCCCCTGGTCCGGGAGGTTCATGGCAGCGAGCGTCACGCCTAATGCAGCCCACCCCCGAGATCAACTCATGGACACGATCACTATCGgcg                                                                                           <  2:500906/149‑1 (MQ=255)
                                                          tggtCCGATCGACCTGGTTCCCCATCACCAGGCTGCATCGGTCGTGGCGTTCGCCCTCCCCTGGTCCGGGAGGTTCATGGCAGCGAGCGTCACGACCAATGCAGCCCACCCCCGAGATCAAATCATGGACACGATCACTATCGGCGCATg                                                                                       <  2:186099/150‑1 (MQ=255)
                                                             tCCGATCGACCTGGTTCCCCATCACCAGGCTGCATCGGTCGTGGCGTTCGCCCTCCCCTGGTCCGGGAGGTTCATGGCAGCGAGCGTCACGACCAATGCAGCCCACCCCCGAGATCAAATCATGGACACGATCACTATCGGCGCATGGAt                                                                                    >  1:1245421/1‑150 (MQ=255)
                                                               cGATCGACCTGGTTCCCCATCACCAGGCTGCATCGGTCGTGGCGTTCGCCCTCCCCTGGTCCGGGAGGTTCATGGCAGCGAGCGTCACGACCAATGCAGCCCACCCCCGAGATCAAATCATGGACACGATCACTATCGGCGCATGGATAg                                                                                  >  1:1152299/1‑150 (MQ=255)
                                                               cGATCGACCTGGTTCCCCATCACCAGGCTGCATCGGTCGTGGCGTTCGCCCTCCCCTGGTCCGGGAGGTTCATGGCAGCGAGCGTCACGACCAATGCAGCCCACCCCCGAGATCAAATCATGGACACGATCACTATCGGCGCATGGATAg                                                                                  <  1:206489/150‑1 (MQ=255)
                                                                 aTCGACCTGGTTCCCCATCACCAGGCTGCATCGGTCGTGGCGTTCGCCCTCCACTGGTCCGCGAGGTTCCTGGCAGCGAGCGTCACGACCAATGCAGCCCTCCCCCGAGATCAAATCAGGGACACGATCACTATCGGCGCATGGATAGGc                                                                                <  2:787325/150‑1 (MQ=25)
                                                                    gACCTGGTTCCCCATCACCAGGCTGCATCGGTCGTGGCGTTCGCCCTCCCCTGGTCCGGGAGGTTCATGGCAGCGAGCGTCACGACCAATGCAGCCCACCCCCGAGATCAAATCATGGacac                                                                                                         <  2:311209/122‑1 (MQ=255)
                                                                    gACCTGGTTCCCCATCACCAGGCTGCATCGGTCGTGGCGTTCGCCCTCCCCTGGTCCGGGAGGTTCATGGCAGCGAGCGTCACGACCAATGCAGCCCACCCCCGAGATCAAATCATGGacac                                                                                                         >  1:311209/1‑122 (MQ=255)
                                                                     aCCTGGTTCCCCATCACCAGGCTGCATCGGTCGTGGCGTTCGCCCTCCCCTGGTCCGGGAGGTTCATGGCAGCGAGCGTc                                                                                                                                                  <  2:404759‑M2/80‑2 (MQ=255)
                                                                     aCCTGGTTCCCCATCACCAGGCTGCATCGGTCGTGGCGTTCGCCCTCCCCTGGTCCGGGAGGTTCATGGCAGCGAGCGTc                                                                                                                                                  >  1:404759‑M2/1‑79 (MQ=255)
                                                                        tGGTTCCCCATCACCAGGCTGCATCGGTCGTGGCGTTCGCCCTCCCCTGGTCCGGGAGGTTCATGGCAGCGAGCGTCACGACCAATGCAGCCCACCCCCGAGATCAAATCATGGACACGATCACTATCGGCGCATGGATAGGCCATCTCg                                                                         >  1:510473/1‑150 (MQ=255)
                                                                         ggTTCCCCATCACCAGGCTGCATCGGTCGTGGCGTTCGCCCTCCCCTGGTCCGGGAGGTTCATGGCAGCGAGCGTCACGACCAATGCAGCCCACCCCCGAGATCAAATCAt                                                                                                               >  1:485083/1‑111 (MQ=255)
                                                                         ggTTCCCCATCACCAGGCTGCATCGGTCGTGGCGTTCGCCCTCCCCTGGTCCGGGAGGTTCATGGCAGCGAGCGTCACGACCAATGCAGCCCACCCCCGAGATCAAATCAt                                                                                                               <  2:485083/111‑1 (MQ=255)
                                                                               ccATCACCAGGCTGCATCGGTCGTGGCGTTCGCCCTCCCCTGGTCCGGGAGGTTCATGGCAGCGAGCGTCACGACCAATGCAGCCCACCCCCGAGATCAAATCATGGACACGATCACTATCGGCGCATGGATAGGCCATCTCGGCCGAgg                                                                  >  2:707254/1‑150 (MQ=255)
                                                                                cATCACCAGGCTGCATCGGTCGTGGCGTTCGCCCTCCCCTGGTCCGGGAGGTTCATGGCAGCGAGCGTCACGACCAATGCAGCCCACCCCCGAGATCAAATCATGGACACGATCACTATCGGCGCATGGATAGGCCATCTCTGCCGAGGc                                                                 >  1:652388/1‑150 (MQ=255)
                                                                                 aTCACCAGGCTGCATCGGTCGTGGCGTTCGCCCTCCCCTGGTCCGGGAGGTTCATGGCAGCGAGCGTCACGACCAATGCAGCCCACCCCCGAGATCAAATCATGGACACGATCACTATCGGCGCATGGATAGGCCATCTCGGCCGAGGcc                                                                >  1:1235460/1‑150 (MQ=255)
                                                                                      cAGGCTGCATCGGTCGTGGCGTTCGCCCTCCCCTGGTCCGGGAGGTTCATGGCAGCGAGCGTCACGACCAATGCAGCCCACCCCCGAGATCAAATCATGGACACGATCACTATCGGCGCATGGATAGGCCATCTCGGCCGAGGCCTGgcg                                                           >  1:661916/1‑150 (MQ=255)
                                                                                      cAGGCTGCATCGGTCGTGGCGTTCGCCCTCCCCTGGTCCGGGAGGTTCATGGCAGCGAGCGTCACGACCAATGCAGCCCACCCCCGAGATCAAATCATGGACACGATCACTATCGGCGCATGGATAGGCCATCTCGGCCGAGGCCTGgcg                                                           >  2:1218706/1‑150 (MQ=255)
                                                                                       aGGCTGCATCGGTCGTGGCGTTCGCCCTCCCCTGGTCCGGGAGGTTCATGGCAGCGAGCGTCACGACCAATGCAGcc                                                                                                                                   >  1:55684/1‑77 (MQ=255)
                                                                                       aGGCTGCATCGGTCGTGGCGTTCGCCCTCCCCTGGTCCGGGAGGTTCATGGCAGCGAGCGTCACGACCAATGCAGcc                                                                                                                                   <  2:55684/77‑1 (MQ=255)
                                                                                        ggCTGCATCGGTCGTGGCGTTCGCCCTCCCCTGGTCCGGGAGGTTCATGGCAGCGAGCGTCACGACCAATGCAGCCCACCCCCGAGATCAAATCATGGACACGATCACTATCGGCGCATGGATAGGCCATCTCCGCCGAGGCCTGGCGcc                                                         >  2:1275338/1‑150 (MQ=255)
                                                                                         gCTGCATCGGTCGTGGCGTTCGCCCTCCCCTGGTCCGGGAGGTTCATGGCAGCGAGCGTCACGACCAATGCAGCCCACCCCCGAGATCAAATCATGGACACGATCACTATCGGCGCATGGATAGGCCATCTCGGCCGAGGCCTGGCGCCt                                                        >  1:990825/1‑150 (MQ=255)
                                                                                           tGCATCGGTCGTGGCGTTCGCCCTCCCCTGGTCCGGGAGGTTCATGGCAGCGAGCGTCACGACCAATGCAGCCCACCCCCGAGATCAAATCATGGACACGATCACTATCGGCGCATGGATAGGCCATCTCGGCCGAGGCCTGGCGCCTcg                                                      <  2:652388/150‑1 (MQ=255)
                                                                                                     gTGGCGTTCGCCCTCCCCTGGTCCGGGAGGTTCATGGCAGCGAGCGTcacgaccgatgcagcctggtgatggggaaccaggtcgatcggaccaccagcgtgtggtggcatattgatggtgcccggatgtttagccacgccgggccgtggt                                            <  1:116141‑M2/150‑104 (MQ=255)
                                                                                                     gTGGCGTTCGCCCTCCCCTGGTCCGGGAGGTTCATGGCAGCGAGCGTCACGACCAATGCAGCCCACCCCCGAGATCAAATCATGGACACGATCACTATCGGCGCATGGATAGGc                                                                                <  1:1031160/114‑1 (MQ=255)
                                                                                                     gTGGCGTTCGCCCTCCCCTGGTCCGGGAGGTTCATGGCAGCGAGCGTCACGACCAATGCAGCCCACCCCCGAGATCAAATCATGGACACGATCACTATCGGCGCATGGATAGGc                                                                                >  2:1031160/1‑114 (MQ=255)
                                                                                                     gTGGCGTTCGCCCTCCCCTGGTCCGGGAGGTTCATGGCAGCGAGCGTCACGACCAATGCAGCCCACCCCCGAGATCAAATCATGGACACGATCACTATCGGCGCATGGATAGGCCATCTCGGCCGAGGCCTGGCGCCTCGCGAACTGCaa                                            <  2:1172579/150‑1 (MQ=255)
                                                                                                     gTGGCGTTCGCCCTCCCCTGGTCCGGGAGGTTCATGGCAGCGAGCGTCACGACCAATGCAGCCCACCCCCGAGATCAAATCATGGACACGATCACTATCGGCGCATGGATAGGCCATCTCGGCCGAGGCCTGGCGCCTCGCGAACTGCaa                                            >  1:1032885/1‑150 (MQ=255)
                                                                                                      tGGCGTTCGCCCTCCCCTGGTCCGGGAGGTTCATGGCAGCGAGCGTcacgaccgatgcagcctggtgatggggaaccaggtcgatcggaccaccagcgtgtggtggcatattgatggtgcccggatgtttagccacgccgggccgtggta                                           <  2:1065718‑M2/150‑105 (MQ=255)
                                                                                                        gCGTTCGCCCTCCCCTGGTCCGGGAGGTTCATGGCAGCGAGCGTCACGACCAATGCAGCCCACCCCCGAGATCAAATCATGGACACGATCACTATCGGCGCATGGATAGGCCATCTCGGCCGAGGCCTGGCGCCTCGCGAACTGCAATGc                                         >  2:1180944/1‑150 (MQ=255)
                                                                                                          gTTCGCCCTCCCCTGGTCCGGGAGGTTCATGGCAGCGAGCGTCACGACCAATGCAGCCCACCCCCGAGATCAAATCATGGACACGATCACTATCGGCGCATGGATAGGCCATCTCGGCCGAGGCCTGGCGCCTCGCGAACTGCAATGCCt                                       <  1:923093/150‑1 (MQ=255)
                                                                                                           ttCGCCCTCCCCTGGTCCGGGAGGTTCATGGCAGCGAGCGTcacgaccgatgcagcctggtgatggggaaccaggtcgatcggaccaccagcgtgtggtggcatattgatggtgcccggatgtttagccacgccgggccgtggtagcctc                                      >  1:1065718‑M2/1‑41 (MQ=255)
                                                                                                               cccTCCCCTGGTCCGGGAGGTTCATGGCAGCGAGCGTCACGACCAATGCAGCCCACCCCCGAGATCAAATCATGGACACGATCACTATCGGCGCATGGATAGGCCATCTCGGCCGa                                                                    <  2:700943/116‑1 (MQ=255)
                                                                                                               cccTCCCCTGGTCCGGGAGGTTCATGGCAGCGAGCGTCACGACCAATGCAGCCCACCCCCGAGATCAAATCATGGACACGATCACTATCGGCGCATGGATAGGCCATCTCGGCCGa                                                                    >  1:700943/1‑116 (MQ=255)
                                                                                                                 cTCCCCTGGTCCGGGAGGTTCATGGCAGCGAGCGTCACGACCAATGCAGCCCACCCCCGAGATCAAATCATGGACACGATCACTATCGGCGCATGGATAGGCCATCTCGGCCGAGGCCTGGCGCCTCGCGAACTGCAATGCCTGTTGGaa                                <  2:1234669/150‑1 (MQ=255)
                                                                                                                  tCCCCTGGTCCGGGAGGTTCATGGCAGCGAGCGTCACGACCAATGCAGCCCACCCCCGAGATCAAATCAt                                                                                                               >  2:163998/1‑70 (MQ=255)
                                                                                                                  tCCCCTGGTCCGGGAGGTTCATGGCAGCGAGCGTCACGACCAATGCAGCCCACCCCCGAGATCAAATCAt                                                                                                               <  1:163998/70‑1 (MQ=255)
                                                                                                                  cccccTGGTCCGGGAGGTTCATGGCAGCGAGCGTCACGACCAATGCAGCCCACCCCCGAGATCAAATCATGGACACGATCACTATCGGCGCATGGATAGGCCATCTCGGCCGAGGCCTGGCGCCTCGCGAACTGCAATGCCTGTTGGAAg                               <  1:1108789/149‑1 (MQ=255)
                                                                                                                          tCCGGGAGGTTCATGGCAGCGAGCGTCACGACCAATGCAGCCCACCCCCGAGATCAAATCATGGACACGATCACTATCGGCGCATGGATAGGCCATCTCGGCCGAGGCCTGGCGCCTCGCGAACTGCAATGCCTGTTGGAAGTAGCCCAg                       >  2:43222/1‑150 (MQ=255)
                                                                                                                           ccGGGCGGATCAAGACAGCGATCGTCACGACCAATGCAGCCCACCCCCGAGATCAAATCATGGACACGATCACTATCGGCGCATGGATAGGCCATCTCGGCCGAGGCCTGGCGCCTCGCGAACTGCAATGCCTGTTGGAAGTAGCCCAgg                      <  2:32489/150‑1 (MQ=21)
                                                                                                                             gggAGGTTCATGGCAGCGAGCGTCACGACCAATGCAGCCCACCCCCGAGATCAAATCATGGACACGATCa                                                                                                    >  2:1219437/1‑70 (MQ=255)
                                                                                                                             gggAGGTTCATGGCAGCGAGCGTCACGACCAATGCAGCCCACCCCCGAGATCAAATCATGGACACGATCa                                                                                                    <  1:1219437/70‑1 (MQ=255)
                                                                                                                             gggAGGTTCATGGCAGCGAGCGGCACGACCAATGCAGCCCACCCCCGAGATCAAATCATGGACACGATCACTATCGGCGCATGGATAGGCCATCTCGGCCGAGGCCTGGCGCCTCGCGAACTGCAATGCCTGTTGGAAGTAGCCCAGGGc                    <  1:707254/150‑1 (MQ=255)
                                                                                                                                aGGTTCATGGCAGCGAGCGTCACGACCAATGCAGCCCACCCCCGAGATCAAATCATGGACACGATCACTATCGGCGCATGGATAGGCCATCTCGGCCGAGGCCTGGCGCCTCGCGAACTGCAATGCCTGTTGGAAGTAGCCCAGGGCTTc                 <  2:1152299/150‑1 (MQ=255)
                                                                                                                                  gTTCATGGCAGCGAGCGTCACGACCAATGCAGCCCACCCCCGAGATCAAATCATGGACACGATCACTATCGGCGCATGGATAGGCCATCTCGGCCGAGGCCTGGCGCCTCGCGAACTGCAATGCCTGTTGGAAGTAGCCCAGGGCTTcac               <  2:990825/150‑1 (MQ=255)
                                                                                                                                       tGGCAGCGAGCGTCACGACCAATGCAGCCCACCCCCGAGATCAAATCATGGACACGATCACTATCGGCGCATGGATAGGCCATCTCGGCCGATGCCTGGCGCCTCGCGAACTGCAATGCCTGTTGGAAGTAGCCCAGGGCTTc                 <  1:1187605/143‑1 (MQ=255)
                                                                                                                                       tGGCAGCGAGCGTCACGACCAATGCAGCCCACCCCCGAGATCAAATCATGGACACGATCACTATCGGCGCATGGATAGGCCATCTCGGCCGAGGCCTGGCGCCTCGCGAACTGCAATGCCTGTTGGAAGTAGCCCAGGGCTTc                 >  2:1187605/1‑143 (MQ=255)
                                                                                                                                       tGGCAGCGAGCGTCACGACCAATGCAGCCCACCCCCGAGATCAAATCATGGACACGATCACTATCAGCGCCTGGATAGGGCATCTCGGCCGAGGCCTGCCGCCTCACGAACTGAAATGCCTGTCGTCAGTAGCCCCGGGCTTGaccaccc          >  2:558346/1‑149 (MQ=18)
                                                                                                                                        ggCAGCGAGCGTCACGACCAATGCAGCCCACCCCCGAGATCAAATCATGGACACGATCACTATCGGCGCATGGATAGGCCATCTCGGCCGAGGCCTGGCGCCTCGCGAACTGCAATGCCTGTTGGAAGTAGCCCAGGGCTTCACCACCaa         <  2:1245421/150‑1 (MQ=255)
                                                                                                                                        ggCAGCGAGCGTCACGACCAATGCAGCCCACCCCCGAGATCAAATCATGGACACGATCACTATCGGCGCATGGATAGGCCATCTCGGCCGAGGCCTGGCGCCTCGCGAACTGCAATGCCTGTTGGAAGTAGCCCAGGGCTTCACCACCaa         <  2:510473/150‑1 (MQ=255)
                                                                                                                                        ggCAGCGAGCGTAACGACCAATGCAGCCCACCCCCGAGATCAAATCATGGACACGATCACTATCGGCGCATGGATAGGCCATCTCGGCCGAGGCCTGGCGCCTCGCGAACTGCAATGCCTGTTGGAAGTAGCCCAGGGCTTCACCACCaa         <  2:661916/150‑1 (MQ=255)
                                                                                                                                               agcgTCACGACCAATGCAGCCCACCCCCGAGATCAAATCATGGACACGATCACTATCGGCGCATGGATAGGCCATCTCGGCCGAGGCCTGGCGCCTCGCGAACTGCAATGCCTGTTGGAAGTAGCCCAGGGCTTCACCACCAAGGAAATc  >  1:826682/1‑150 (MQ=255)
                                                                                                                                                   tCACGACCAATGCAGCCCACCCCCGAGATCAAATCATGGACACGATCACTATCGGCGCATGGATAGGCCATCTCGGCCGAGGCCTGGCGCCTCGCGAACTGCAATGCCTGTTGGAAGTAGCCCAGGGCTTCACCACCAAGGaa     <  2:1204374/143‑1 (MQ=255)
                                                                                                                                                   tCACGACCAATGCAGCCCACCCCCGAGAACAAATCATGGACACGATCACTATCGGCGCATGGATAGGCCATCTCGGCCGAGGCCTGGCGCCTCGCGAACTGCAATGCCTGTTGGAAGTAGCCCAGGGCTTCACCACCAAGGaa     >  1:1204374/1‑143 (MQ=255)
                                                                                                                                                   |                                                                                                                                                 
TACCACGGCCCGGCGTGGCTAAACATCCGGGCACCATCAATATGCCACCACACGCTGGTGGTCCGATCGACCTGGTTCCCCATCACCAGGCTGCATCGGTCGTGGCGTTCGCCCTCCCCTGGTCCGGGAGGTTCATGGCAGCGAGCGTCACGACCAATGCAGCCCACCCCCGAGATCAAATCATGGACACGATCACTATCGGCGCATGGATAGGCCATCTCGGCCGAGGCCTGGCGCCTCGCGAACTGCAATGCCTGTTGGAAGTAGCCCAGGGCTTCACCACCAAGGAAATC  >  NC_002947/4417138‑4417430

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.