Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_002947 2,739,749 G→C 7.5% A695A (GCG→GCC)  PP_2395 → leucine‑rich repeat‑containing protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0029472,739,7490GC 7.5% 205.0 / 5.8 65A695A (GCG→GCC) PP_2395leucine‑rich repeat‑containing protein
Reads supporting (aligned to +/- strand):  ref base G (31/29);  new base C (2/3);  total (33/32)
Fisher's exact test for biased strand distribution p-value = 6.72e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.90e-01

GATACAACAGTGCTCGATCACGCTCGGCGCCTGCCAGGTGCGAGTGGCCTGACAGATCAGGCACTGGCCGCGTTGGCCTGGACGCAGCGCCGAACACTGCTGCAGCACCTTTTCGAAGCCTTGCAGCCCAGCGACACCCCCGGCAGCGCGGCGCTGCGCCGGGTGTTCCCGGGGCTGAGCGCGCGCACTGCGCAAGCACTGGTACAGGCCGCCAGCAGCGTTGATCGCATGCGGCTGCTGTCCAGCGGAAGGGTTGCACTGGGGCTGGCCGAGGCGGCAAGGGGCAGCGTGCTGGCT  >  NC_002947/2739600‑2739896
                                                                                                                                                     |                                                                                                                                                   
gATACAACAGTGCTCGATCACGCTCGGCGCCTGCCAGGTGCGAGTGGCCTGACAGATCAGGCACTGGCCGCGTTGGCCTGGACGCAGCGCCGAACACTGCTGCAGCACCTTTTCGAAGCCTTGCAGCCCAGCGACACCCCCGGCAGcgcg                                                                                                                                                     <  1:896826/150‑1 (MQ=255)
 aTACAACAGTGCTCGATCACGCTCGGCGCCTGCCAGGTGCGAGTGGCCTGACAGATCAGGCACTGGCCGCGTTGGCCTGGACGCAGCGCCGAACACTGCTGCAGCACCTTTTCGAAGCCTTGCAGCCCAGCGACACCCCCGGCAGCgcgg                                                                                                                                                    >  1:993116/1‑150 (MQ=255)
  tACAACAGTGCTCGATCACGCTCGGCGCCTGCCAGGTGCGAGTGGCCTGACAGATCAGGCACTGGCCGCGTTGGCCTGGACGCAGCGCCGAACACTGCTGCAGCACCTTTTCGAAGCCTTGCAGCCCAGCGACACCCCCGGCAGCgcggc                                                                                                                                                   >  2:446437/1‑150 (MQ=255)
        aGTGCTCGATCACGCTCGGCGCCTGCCAGGTGCGAGTGGCCTGACAGATCAGGCACTGGCCGCGTTGGCCTGGACGCAGCGCCGAACACTGCTGCAGCACCTTTTCGAAGCCTTGCAGCCCAGCGACACCCCCGGCAGCGCGGCGCTgcg                                                                                                                                             >  2:429909/1‑150 (MQ=255)
          tGCTCGATCACGCTCGGCGCCTGCCAGGTGCGAGTGGCCTGACAGATCAGGCACTGGCCGCGTTGGCCTGGACGCAGCGCCGAACACTGCTGCAGCACCTTTTCGAAGCCTTGCAGCCCAGCGACACCCCCGGCAGCGCGGCGCTGCGcc                                                                                                                                           >  2:878998/1‑150 (MQ=255)
            cTCGATCACGCTCGGCGCCTGCCAGGTGCGAGTGGCCTGACAGATCAGGCACTGGCCGCGTTGGCCTGGACGCAGCGCCGAACACTGCTGCAGCACCTTTTCGAAGCCTTGCAGCCCAGCGACACCCCCGGCAGCGCGGCGCTGCGCCgg                                                                                                                                         <  1:1143847/150‑1 (MQ=255)
             tCGATCACGCTCGGCGCCTGCCAGGTGCGAGTGGCCTGACAGATCAGGCACTGGCCGCGTTGGCCTGGACGCAGCGCCGAACACTGCTGCAGCACCTTTTCGAAGCCTTGCAGCCCAGCGACACCCCCGGCAGCGCGGCGCTGCGCCggg                                                                                                                                        <  1:90757/150‑1 (MQ=255)
                    cGCTCGGCGCCTGCCAGGTGCGAGTGGCCTGACAGATCAGGCACTGGCCGCGTTGGCCTGGACGCAGCGCCGAACCCTGCTGCAGCACCTTTTCGAAGCCTTGCAGCCCAGCGACACCCCCGGCAGCGCGGCGCTGCGCCGGGGGTTccc                                                                                                                                 <  1:373956/150‑1 (MQ=255)
                     gCTCGGCGCCTGCCAGGTGCGAGTGGCCTGACAGATCAGGCACTGGCCGCGTTGGCCTGGACGCAGCGCCGAACACTGCTGCAGCACCTTTTCGAAGCCTTGCAGCCCAGCGACACCCCCGGCAGCGCGGCGCTGCGCCGGGTGTTCCCg                                                                                                                                <  2:993116/150‑1 (MQ=255)
                     gCTCGGCGCCTGCCAGGTGCGAGTGGCCTGACAGATCAGGCACTGGCCGCGTTGGCCTGGACGCAGCGCCGAACACTGCTGCAGCACCTTTTCGAAGCCTTGCAGCCCAGCGACACCCCCGGCAGCGCCGCGCTgccggg                                                                                                                                          <  2:1098314/140‑5 (MQ=255)
                     gCTCGGCGCCTGCCAGGTGCGAGTGGCCTGACAGATCAGGCACTGGCCGCGTTGGCCTGGACGCAGCGCCGAACACTGCTGCAGCACCTTTTCGAAGCCTTGCAGCCCAGCGACACCCCCGGCAGCGCCGCGCTgccggg                                                                                                                                          >  1:1098314/1‑136 (MQ=255)
                       tCGGCGCCTGCCAGGTGCGAGTGGCCTGACAGATCAGGCACTGGCCGCGTTGGCCTGGACGCAGCGCCGAACACTGCTGCAGCACCTTTTCGAAGCCTTGCAGCCCAGCGACACCCCCGGCAGCGCGGCGCTGCGCCGGGTGTTCCCggg                                                                                                                              >  1:321264/1‑150 (MQ=255)
                                gCCAGGTGCGAGTGGCCTGACAGATCAGGCACTGGCCGCGTTGGCCTGGACGCAGCGCCGAACACTGCTGCAGCACCTTTTCGAAGCCTTGCAGCCCAGCGACACCCCCGGCAGCGCGGCGCTGCGCCGGGTGTTCCCGGGGCTGAgcgc                                                                                                                     <  2:918552/150‑1 (MQ=255)
                                 ccAGGTGCGAGTGGCCTGACAGATCAGGCACTGGCCGCGTTGGCCTGGACGCAGCGCCGAACACTGCTGCAGCACCTTTTCGAAGCCTTGCAGCCCAGCGACACCCCCGGCAGCGCGGCGCTGCGCCgg                                                                                                                                         >  2:697198/1‑129 (MQ=255)
                                 ccAGGTGCGAGTGGCCTGACAGATCAGGCACTGGCCGCGTTGGCCTGGACGCAGCGCCGAACACTGCTGCAGCACCTTTTCGAAGCCTTGCAGCCCAGCGACACCCCCGGCAGCGCGGCGCTGCGCCgg                                                                                                                                         <  1:697198/129‑1 (MQ=255)
                                         gAGTGGCCTGACAGATCAGGCACTGGCCGCGTTGGCCTGGACGCAGCGCCGAACACTGCTGCAGCACCTTTTCGAAGCCTTGCAGCCCAGCGACACCCCCGGCAGCGCGGCGCTGCGCCGGGTGTTCCCGGGGCTGAGCGCGCGCACTgc                                                                                                            >  1:1069822/1‑150 (MQ=255)
                                         gAGTGGCCTGACAGATCAGGCACTGGCCGCGTTGGCCTGGACGCAGCGCCGAACACTGCTGCAGCACCTTTTCGAAGCCTTGCAGCCCAGCGACACCCCCGGCAGCGCGGCGCTGCGCCGGGTGTTCCCGGGGCTGAGCGCGCGCACTgc                                                                                                            >  1:712339/1‑150 (MQ=255)
                                         gAGTGGCCTGACAGATCAGGCACTGGCCGCGTTGGCCTGGACGCAGCGCCGAACACTGCTGCAGCACCTTTTCGAAGCCTTGCAGCCCAGCGACACCCCCGGCAGCGCGGCGCTGCGCCGGGTGTTCCCGGGGCTGAGCGCGCGCACTgc                                                                                                            <  1:878998/150‑1 (MQ=255)
                                          aGTGGCCTGACAGATCAGGCACTGGCCGCGTTGGCCTGGACGCAGCGCCGAACACTGCTGCAGCACCTTTTCGAAGCCTTGCAGCCCAGCGACACCCCCGGCAGCGCGGCGCTGCGCCGGGTGTTCCCGGGGCTGAGCGCGCGCACTgcg                                                                                                           >  1:395175/1‑150 (MQ=255)
                                           gTGGCCTGACAGATCAGGCACTGGCCGCGTTGGCCTGGACGCAGCGCCGAACACTGCTGCAGCACCTTTTCGAAGCCTTGCAGCCCAGCGACACCCCCGGCAGCGCGGCGCTGCGCCGGGTGTTCCCGGGGCTGAGCGCGCGCACTgcgc                                                                                                          >  1:1169406/1‑150 (MQ=255)
                                              gCCTGACAGATCAGGCACTGGCCGCGTTGGCCTGGACGCAGCGCCGAACACTGCTGCAGCACCTTTTCGAAGCCTTGCAGCCCAGCGACACCCCCGGCAGCGCGGCGCTGCGCCGGGTGTTCCCGGGGCTGAGCGCGCGCACTGCGCAAg                                                                                                       >  1:1067945/1‑150 (MQ=255)
                                                cTGACAGATCAGGCACTGGCCGCGTTGGCCTGGACGCAGCGCCGAACACTGCTGCAGCACCTTTTCGAAGCCTTGCAGCCCAGCGACACCCCCGGCAGCGCGGCGCTGCGCCGGGTGTTCCCGGGGCTGAGCGCGCGCACTGCGCAAGCa                                                                                                     >  1:773424/1‑150 (MQ=255)
                                                 tGACAGATCAGGCACTGGCCGCGTTGGCCTGGACGCAGCGCCGAACACTGCTGCAGCACCTTTTCGAAGCCTTGCAGCCCAGCGACACCCCCGGCAGCGCGGCGCTGCGCCGGGTGTTCCCGGGGCTGAGCGCGCGCACTGCGCAAGCAc                                                                                                    >  2:592897/1‑150 (MQ=255)
                                                 tGACAGATCAGGCACTCGCAGCGCTCGACTGGAGGGAGCGCTGAATACTGCGGCATCACCTTTTCGAAGCCTTGCAGCCCAGCGACACCCCCGGCAGCGCGGCGCTGCGCCGGGTGTTCCCGGGGCTGAGCGCGCGCACTGCGCAAGCAc                                                                                                    >  2:655876/1‑150 (MQ=255)
                                                  gACAGATCAGGCACTGGCCGCGTTGGCCTGGACGCAGCGCCGAACACTGCTGCAGCACCTTTTCGAAGCCTTGCAGCCCAGCGACACCCCCGGCAGCGCGGCGCTGCGCCGGGTGTTCCCGGGGCTGAGCGCGCGCACTGCGCAAGCACt                                                                                                   >  1:641177/1‑150 (MQ=255)
                                                   tcAGATCAGGCACTGGCCGCGTTGGCCTGGACGCAGCGCCGAACACTGCTGCAGCACCTTTTCGAAGCCTTGCAGCCCAGCGACACCCCCGGCAGCGCGGCGCTGCGCCGGGTGTTCCCGGGGCTGAGCGCGCGCACTGCGCAAGCACTg                                                                                                  <  2:1026643/149‑1 (MQ=255)
                                                   aCAGATCAGGCACTGGCCGCGTTGGCCTGGACGCAGCGCCGAACACTGCTGCAGCACCTTTTCGAAGCCTTGCAGCCCAGCGACACCCCCGGCAGCGCGGCGCTGCGCCGGGTGTTCCCGGGGCTGAGCGCGCGCACTGCGCAAGCACTg                                                                                                  <  2:1067945/150‑1 (MQ=255)
                                                     aGATCAGGCACTGGCCGCGTTGGCCTGNACGCAGCGCCGANCACTGCNGCAGCACCTTTTCGAAGCCTTGCAGCCCAGCGACACCCCCGGCAGCGCGGCGCTGCGCCGGGTGTTCCCGGGGCTGAGCGCGCGCACTGCGCAAGCACTgga                                                                                                >  1:1026643/1‑149 (MQ=255)
                                                      gATCAGGCACTGGCCGCGTTTGCCTGGACGCAGCGCCGAACACTGCTGCAGCACCTTTTCGAAGCCTTGCAGCCCAGCGACACCCCCGGCAGCGCGGCGCTGCGCCGGGTGTTCCCGGGGCTGAGCGCGCGCACTGCGCAAGCACTGGTa                                                                                               <  2:984655/150‑1 (MQ=255)
                                                       aTCAGGCACTGGCCGCGTTGGCCTGGACGCAGCGCCGAACACTGCTGCAGCACCTTTTCGAAGCCTTGCAGCCCAGCGACACCCCCGGCAGCGCGGCGCTGCGCCGGGTGTTCCCGGGGCTGAGCGCGCGCACTGCGCAAGCACTGGTAc                                                                                              >  2:254119/1‑150 (MQ=255)
                                                         cAGGCACTGGCCGCGTTGGCCTGGACGCAGCGCCGAACACTGCTGCAGCACCTTTTCGAAGCCTTGCAGCCCAGCGACACCCCCGGCAGCGCGGCGCTGCGCCGGGTGTTCCCGGGGCTGAGCGCGCGCACTGCGCAAGCACTGGTACAg                                                                                            <  1:429909/150‑1 (MQ=255)
                                                               cTGGCCGCGTTGGCCTGGACGCAGCGCCGAACACTGCTGCAGCACCTTTTCGAAGCCTTGCAGCCCAGCGACACCCCCGGCAGCGCGGCGCTGCGCCGGGTGTTCCCGGGGCTGAGCGCGCGCACTGCGCAAGCACTGGTACAGgccgcc                                                                                      >  2:567642/1‑150 (MQ=255)
                                                                  gCCGCGTTGGCCTGGACGCAGCGCCGAACACTGCTGCAGCACCTTTTCGAAGCCTTGCAGCCCAGCGACACCCCCGGCAGCGCGGCGCTGCGCCGGGTGTTCCCGGGGCTGAGCGCGCGCACTGCGCAAGCACTGGTACAGGCCGCcagc                                                                                   >  1:787113/1‑150 (MQ=255)
                                                                    cgcgTTGGCCTGGACGCAGCGCCGAACACTGCTGCAGCACCTTTTCGAAGCCTTGCAGCCCAGCGACACCCCCGGCAGCGCGGCGCTGCGCCGGGTGTTCCCGGGGCTGAGCGCGCGCACTGCGCAAGCACTGGTACAGGCCGCcagcag                                                                                 >  2:27024/1‑150 (MQ=255)
                                                                     gcgTTGGCCTGGACGCAGCGCCGAACACTGCTGCAGCACCTTTTCGAAGCCTTGCAGCCCAGCGACACCCCCGGCAGCGCGGCGCTGCGCCGGGTGTTCCCGGGGCTGAGCGCGCGCACTGCGCAAGCACTGGTACAGGCCGCCagcagc                                                                                <  1:254119/150‑1 (MQ=255)
                                                                       gTTGGCCTGGACGCAGCGCCGAACACTGCTGCAGCACCTTTTCGAAGCCTTGCAGCCCAGCGACACCCCCGGCAGCGCGGCGCTGCGCCGGGTGTTCCCGGGGCTGAGCGCGCGCACTGCGCAAGCACTGGTACAGGCCGCCAGCAGCGt                                                                              <  2:773424/150‑1 (MQ=255)
                                                                            ccTGGACGCAGCGCCGAACACTGCTGCAGCACCTTTTCGAAGCCTTGCAGCCCAGCGACACCCCCGGCAGCGCGGCGCTGCGCCGGGTGTTCCCGGGGCTGAGCGCGCGCACTGCGCAAGCACTGGTACAGGCCGCCAGCAGCGTTGATc                                                                         >  1:905123/1‑150 (MQ=255)
                                                                            ccTGGACGCAGCGCCGAACACTGCTGCAGCACCTTTTCGAAGCCTTGCAGCCCAGCGACACCCCCGGCAGCGCGGCGCTGCGCCGGGTGTTCCCGGGGCTGAGCGCGCGCACTGCGCAAGCACTGGTACAGGCCGCCAGCAGCGTTGATc                                                                         <  2:1069822/150‑1 (MQ=255)
                                                                             cTGGACGCAGCGCCGAACACTGCTGCAGCACCTTTTCGAAGCCTTGCAGCCCAGCGACACCCCCGGCAGCGCGGCGCTGCGCCGGGTGTTCCCGGGGCTGAGCGCGCGCACTGCGCAAGCACTGGTACAGGCCGCCAGCAGCGTTGATCg                                                                        >  1:899974/1‑150 (MQ=255)
                                                                                       cgcCGAACACTGCTGCAGCACCTTTTCGAAGCCTTGCAGCCCAGCGACACCCCCGGCAGCGCGGCGCTGCGCCGGGTGTTCCCGGGGCTGAGCGCGCGCACTGCGCAAGCACTGGTACAGGCCGCCAGCAGCGTTGATCGCATGCGgctg                                                              <  2:321264/150‑1 (MQ=255)
                                                                                           gAACACTGCTGCAGCACCTTTTCGAAGCCTTGCAGCCCAGCGACACCCCCGGCAGCGCGGCGCTGCGCCGGGTGTTCCCGGGGCTGAGCGCGCGCACTGCGCAAGCACTGGTACAGGCCGCCAGCAGCGTTGATCGCATGCGGCTGCTGt                                                          <  1:27024/150‑1 (MQ=255)
                                                                                           gAACACTGCTGCAGCACCTTTTCGAAGCCTTGCAGCCCAGCGACACCCCCGGCACTTTCTTTCTGCGCCGGGTGTTCCCGGGGCTGAGCGCGCGCACTGCGCAAGCACTGGTACAGGCCGCCAGCAGCGTTGATCGCATGCGGCTGCTGt                                                          <  1:655876/150‑1 (MQ=255)
                                                                                                 tgctgcAGCACCTTTTCGAAGCCTTGCAGCCCAGCGACACCCCCGGCAGCGCGGCGCTgcgc                                                                                                                                            >  2:759410/1‑62 (MQ=255)
                                                                                                 tgctgcAGCACCTTTTCGAAGCCTTGCAGCCCAGCGACACCCCCGGCAGCGCGGCGCTgcgc                                                                                                                                            <  1:759410/62‑1 (MQ=255)
                                                                                                     gcagcaCCTTTTCGAAGCCTTGCAGCCCAGCGACACCCCCGGCAGCGCGGCGCTGCGCCGGGTGTTCCCGGGGCTGAGCGCGCGCACTGCGCAAGCACTGGTACAGGCCGCCAGCAGCGTTGATCGCATGCGGCTGCTGTCCAGCGGAAg                                                <  2:641177/150‑1 (MQ=255)
                                                                                                      cagcaCCTTTTCGAAGCCTTGCAGCCCAGCGACACCCCCGGCAGCGCGGCGCTGCGCCGGGTGTTCCCGGGGCTGAGCGCGCGCACTGCGCAAGCACTGGTACAGGCCGCCAGCAGCGTTTATCGCATGCGGCTGCTGTCCAGCGGAAgg                                               <  1:561472/150‑1 (MQ=255)
                                                                                                      cagcaCCTTTTCGAAGCCTTGCAGCCCAGCGACACCCCCGGCAGCGCGGCGCTGCGCCGGGTGTTCCCGGGGCTGAGCGCGCGCACTGCGCAAGCACTGGTACAGGCCGCCAGCAGCGTTGATCGCATGCGGCTGCTGTCCAGCg                                                    >  1:1105186/1‑145 (MQ=255)
                                                                                                      cagcaCCTTTTCGAAGCCTTGCAGCCCAGCGACACCCCCGGCAGCGCGGCGCTGCGCCGGGTGTTCCCGGGGCTGAGCGCGCGCACTGCGCAAGCACTGGTACAGGCCGCCAGCAGCGTTGATCGCATGCGGCTGCTGTCCAGCg                                                    <  2:1105186/145‑1 (MQ=255)
                                                                                                                tCGAAGCCTTGCAGCCCAGCGACACCCCCGGCAGCGCGGCGCTGCGCCGGGTGTTCCCGGGGCTGAGCGCGCGCACTGCGCAAGCACTGGTACAGGCCGCCAGCAGCGTTGATCGCATGCGGCTGCTGTCCAGCGGAAGGGTTGCACTgg                                     <  1:880423/150‑1 (MQ=255)
                                                                                                                  gAAGCCTTGCAGCCCAGCGACACCCCCGGCAGCGCGGCGCTGCGCCGGGTGTTCCCGGGGCTGAGCGCGCGCACTGCGCAAGCACTGGTACAGGCCGCcag                                                                                    >  2:444731/1‑101 (MQ=255)
                                                                                                                  gAAGCCTTGCAGCCCAGCGACACCCCCGGCAGCGCGGCGCTGCGCCGGGTGTTCCCGGGGCTGAGCGCGCGCACTGCGCAAGCACTGGTACAGGCCGCcag                                                                                    <  1:444731/101‑1 (MQ=255)
                                                                                                                   aaGCCTTGCAGCCCAGCGACACCCCCGGCAGCGCGGCGCTGCGCCGGGTGTTCCCGGGGCTGAGCGCGCGCACTGCGCAAGCACTGGTACAGGCCGCCAGCAGCGTTGATCGCATGCGGCTGCTGTCCAGCGGAAGGGTTGCACTGGGGc                                  >  2:1083399/1‑150 (MQ=255)
                                                                                                                    aGCCTTGCAGCCCAGCGACACCCCCGGCAGCGCGGCGCTGCGCCGGGTGTTCCCGGGGCTGAGCGCGCGCACTGCGCAAGCACTGGTACAGGCCGCCAGCAGCGTTGATCGCATg                                                                    <  1:1116143/115‑1 (MQ=255)
                                                                                                                    aGCCTTGCAGCCCAGCGACACCCCCGGCAGCGCGGCGCTGCGCCGGGTGTTCCCGGGGCTGAGCGCGCGCACTGCGCAAGCACTGGTACAGGCCGCCAGCAGCGTTGATCGCATg                                                                    >  2:1116143/1‑115 (MQ=255)
                                                                                                                            aGCCCAGCGACACCCCCGGCAGCGCGGCGCTGCGCCGGGTGTTCCCGGGGCTGAGCGCGCGCACTGCGCAAGCACTGGTACAGGCCGCCAGCAGCGTTGATCGCATGCGGCTGCTGTCCAGc                                                     >  1:822446/1‑122 (MQ=255)
                                                                                                                            aGCCCAGCGACACCCCCGGCAGCGCGGCGCTGCGCCGGGTGTTCCCGGGGCTGAGCGCGCGCACTGCGCAAGCACTGGTACAGGCCGCCAGCAGCGTTGATCGCATGCGGCTGCTGTCCAGc                                                     <  2:822446/122‑1 (MQ=255)
                                                                                                                            aGCCCAGCGACACCCCCGGCAGCGCGGCGCTGCGCCGGGTGTTCCCGGGGCTGAGCGCGCGCACTGCGCAAGCACTGGTACAGGCCGCCAGCAGCGTTGATCGCATGCGGCTGCTGTCCAGCGGAAGGGTTGCACTGGGGCTGGCCGAgg                         <  1:165425/150‑1 (MQ=255)
                                                                                                                               ccAGCGACACCCCCGGCAGCGCGGCGCTGCGCCGGGTGTTCCCGGGGCTGAGCGCGCGCACTGCGCAAGCACTGGTACAGGCCGCCAGCAGCGTTGATCGCATGCGGCTGCTGTCCAGc                                                     <  2:552669/119‑1 (MQ=255)
                                                                                                                               ccAGCGACACCCCCGGCAGCGCGGCGCTGCGCCGGGTGTTCCCGGGGCTGAGCGCGCGCACTGCGCAAGCACTGGTACAGGCCGCCAGCAGCGTTGATCGCATGCGGCTGCTGTCCAGc                                                     >  1:552669/1‑119 (MQ=255)
                                                                                                                               ccAGCGACACCCCCGGCAGCGCGGCGCTGCGCCGGGTGTTCCCGGGGCTGAGCGCGCGCACTGCGCAAGCACTGGTACAGGCCGCCAGCAGCGTTGATCGCATGCGGCTGCTGTCCAGCGGAAGGGTTGCACTGGGGCTGGCCGAggcgg                      >  1:624664/1‑150 (MQ=255)
                                                                                                                                cAGCGACACCCCCGGCAGCGCGGCGCTGCGCCGGGTGTTCCCGGGGCTGAGCGCGCGCACTGCGCAAGCACTGGTACAGGCCGCCAGCAGCGTTGATCGCATGCGGCTGCTGTCCAGCGGAAGGGTTGCACTGGGGCTGGCCGa                           >  2:861333/1‑144 (MQ=255)
                                                                                                                                cAGCGACACCCCCGGCAGCGCGGCGCTGCGCCGGGTGTTCCCGGGGCTGAGCGCGCGCACTGCGCAAGCACTGGTACAGGCCGCCAGCAGCGTTGATCGCATGCGGCTGCTGTCCAGCGGAAGGGTTGCACTGGGGCTGGCCGa                           <  1:861333/144‑1 (MQ=255)
                                                                                                                                    gACCCCCCCGGCAGCGCGGCGCTGCGCCGGGTGTTCCCGGGGCCGAGCGCGCGCACTGCGCAAGCACTGGTACAGGCCGCCAGCAGCGTTGATCGCATGCGGCTGCTGTCCAGCGGAAGGGTTGCACTGGGGCTGGCCGAGGCGGCAAgg                 <  1:678146/150‑1 (MQ=255)
                                                                                                                                     acacCCCCGGCAGCGCGGCGCTGCGCCGGGTGTTCCCGGGGCTGAGCGCGCGCACTGCGCAAGCACTGGTACAGGCCGCCAGCAGCGTTGATCGCATGCGGCTGCTGTCCAGCGGAAGGGTTGCACTGGGGCTGGCCGAGGCGGCAAggg                <  1:446437/150‑1 (MQ=255)
                                                                                                                                       acccggcgCAGCGCCGCGCT‑‑GCCGGGTGTTCCCGGGGCTGAGCGCGCGCACTGCGCAAGCACTGGTACAGGCCGCCAGCAGCGTTGATCGCATGCGGCTGCTGTCCAGCGGAAGGGTTGCACTGGGGCTGGCCGAGGCGGCAAGGGGCAg            >  2:894855/8‑150 (MQ=255)
                                                                                                                                          cccGGCAGCGCGGCGCTGCGCCGGGTGTTCCCGGGGCTGAGCGCGCGCACTGCGCAAGCACTGGTACAGGCCGCCAGCAGCGTTGATCGCATGCGGCTGCTGTCCAGCGGAAGGGTTGCACTGGGGCTGGCCGAGGCGGCAAGGGGCAGc           >  2:1047079/1‑150 (MQ=255)
                                                                                                                                          cccGGCAGCGCGGCGCTGCGCCGGGTGTTCCCGGGGCTGAGCGCGCGCACTGCGCAAGCACTGGTACAGGCCGCCAGCAGCGTTGATCGCATGCGGCTGCTGTCCAGCGGAAGGGTTGCACTGGGGCTGGCCGAGGCGGCAAGGGGCAGc           >  1:539092/1‑150 (MQ=255)
                                                                                                                                              gCAGCGCCGCGCT‑‑GCCGGGTGTTCCCGGGGCTGAGCGCGCGCACTGCGCAAGCACTGGTACAGGCCGCCAGCAGCGTTGATCGCATGCGGCTGCTGTCCAGCGGAAGGGTTGCACTGGGGCTGGCCGAGGCGGCAAGGGGCAGCGTGCTg     <  1:894855/150‑1 (MQ=255)
                                                                                                                                                   gcggcgCTGCGCCGGGTGTTCCCGGGGCTGAGCGCGCGCACTGCGCAAGCACTGGTACAGGCCGCCAGCAGCGTTGATCGCATGCGGCTGCTGTCCAGCGGAAGGGTTGCACTGGGGCTGGCCGAGGCGGCAAGGGGCAGCGTGCTGGCt  >  2:1096894/1‑150 (MQ=255)
                                                                                                                                                     |                                                                                                                                                   
GATACAACAGTGCTCGATCACGCTCGGCGCCTGCCAGGTGCGAGTGGCCTGACAGATCAGGCACTGGCCGCGTTGGCCTGGACGCAGCGCCGAACACTGCTGCAGCACCTTTTCGAAGCCTTGCAGCCCAGCGACACCCCCGGCAGCGCGGCGCTGCGCCGGGTGTTCCCGGGGCTGAGCGCGCGCACTGCGCAAGCACTGGTACAGGCCGCCAGCAGCGTTGATCGCATGCGGCTGCTGTCCAGCGGAAGGGTTGCACTGGGGCTGGCCGAGGCGGCAAGGGGCAGCGTGCTGGCT  >  NC_002947/2739600‑2739896

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑