Predicted mutation | |||||||
---|---|---|---|---|---|---|---|
evidence | seq id | position | mutation | freq | annotation | gene | description |
RA | NC_002947 | 230,863 | C→T | 5.5% | A175V (GCG→GTG) | PP_0179 → | putative efflux transporter |
Read alignment evidence... | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
* | NC_002947 | 230,863 | 0 | C | T | 5.5% | 207.3 / 2.2 | 73 | A175V (GCG→GTG) | PP_0179 | putative efflux transporter |
Reads supporting (aligned to +/- strand): ref base C (32/37); new base T (2/2); total (34/39) | |||||||||||
Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 2.88e-01 |
GGTGCCGGTAGCCAACATCGGTGAGGCCATCATCAGTGCTTCGTACCAGTTCGACCTGTGGGGCACCTTCAAGCGTGGTACCGAGGCTGCCAAGGCAAATGCCGACGCGGTGCAGGCCGCTGCCGACACTGCCCGCATCACGCTTGTGGCGGACGTGGTCAAGGCTTATACCCAGGTGTGCTCGGCCAACGAGGAATACCACATTGCCCGTGAGTCCCTCGATTTGCAGGAGCAAAGCGTGAAACTCAACCAGCGCCTGCGCGATGCTGGGCGTGGCGATGAAACCCAGGTCACTCGC > NC_002947/230714‑231011 | ggTGCCGGTAGCCAACATCGGTGAGGCCATCATCAGTGCTTCGTACCAGTTCGACCTGTGGGGCACCTTCAAGCGTGGTACCGAGGCTGCCAAGGCAAATGCCGACGCGGTGCAGGCCGCTGCCGACACTGCCCGCATCACGCTTGTGGc < 2:634235/150‑1 (MQ=255) tAGCCAACATCGGTGAGGCCATCATCAGTGCTTCGTACCAGTTCGACCTGTGGGGCACCTTCAAGCGTGGTACCGAGGCTGCCAAGGCAAATGCCGACGCGGTGCAGGCCGCTGCCGACACTGCCCGCATCACGCTTGTGGCGGACGTgg < 1:620311/150‑1 (MQ=255) cAACATCGGTGAGGCCATCATCAGTGCTTCGTACCAGTTCGACCTGTGGGGCACCTTCAAGCGTGGTACCGAGGCTGCCAAGGCAAATGCCGACGCGGTGCAGGCCGCTGCCGACACTGCCCGCATCACGCTTGTGGCGGACGTGGTCaa > 2:141220/1‑150 (MQ=255) aaaCATCGGTGAGGCCATCATCAGTGCTTCGTACCAGTTCGACCTGTGGGGCACCTTCAAGCGTGGTACCGAGGCTGCCAAGGCAAATGCCGACGCCGTGCAGGCCGCTGCCGACACTGACCGCATCACGCTTGTGGCGGACGTGGTCaa < 2:873000/149‑1 (MQ=255) aaCATCGGTGAGGCCATCATCAGTGCTTCGTACCAGTTCGACCTGTGGGGCACCTTCAAGCGTGGTACCGAGGCTGCCAAGGCAAATGCCGACGCGGTGCAGGCCGCTGCCGACACTGCCCGCATCACGCTTGTGGCGGACGTGGTCAAg > 2:167128/1‑150 (MQ=255) aCATCGGTGAGGCCATCATCAGTGCTTCGTACCAGTTCGACCTGTGGGGCACCTTCAAGCGTGGTACCGAGGCTGCCAAGGCAAATGCCGACGCGGTGCAGGCCGCTGCCGACACTGCCCGCATCACGCTTGTGGCGGACGTGGTCAAgg < 2:574513/150‑1 (MQ=255) cATCGGTGAGGCCATCATCAGTGCTTCGTACCAGTTCGACCTGTGGGGCACCTTCAAGCGTGGTACCGAGGCTGCCAAGGCAAATGCCGACGCGGTGCAGGCCGCTGCCGACACTGCCCGCATCACGCTTGTGGCGGACGTGGTCAAGGc < 2:642514/150‑1 (MQ=255) cATCGGTGAGGCCATCATCAGTGCTTCGTACCAGTTCGACCTGTGGGGCACCTTCAAGCGTGGTACCGAGGCTGCCAAGGCAAATGCCGACGCGGTGCAGGCCGCTGCCGACACTGCCCGCATCACGCTTGTGGCGGACGTGGTCAAGGc > 2:416790/1‑150 (MQ=255) gTGAGGCCATCATCAGTGCTTCGTACCAGTTCGACCTGTGGGGCACCTTCAAGCGTGGTACCGAGGCTGCCAAGGCAAATGCCGACGCGGTGCAGGCCGCTGCCGACACTGCCCGCATCACGCTTGTGGCGGACGTGGTCAAGGCTtata < 1:416790/150‑1 (MQ=255) gCCATCATCAGTGCTTCGTACCAGTTCGACCTGTGGGGCACCTTCAAGCGTGGTACCGAGGCTGCCAAGGCAAATGCCGACGCGGTGCAGGCCGCTGCCGACACTGCCCGCATCACGCTTGTGGCGGACGTGGTCAAGGCTTATAcaccc < 2:216914/150‑5 (MQ=255) gCCATCATCAGTGCTTCGTACCAGTTCGACCTGTGGGGCACCTTCAAGCGTGGTACCGAGGCTGCCAAGGCAAATGCCGACGCGGTGCAGGCCGCTGCCGACACTGCCCGCATCACGCTTGTGGCGGACGTGGTCAAGGCTTATACCCAg < 1:141220/150‑1 (MQ=255) gCCATCATCAGTGCTTCGTACCAGTTCGACCTGTGGGGCACCTTCAAGCGTGGTACCGAGGCTGCCAAGGCAAATGCCGACGCGGTGCAGGCCGCTGCCGACACTGCCCGCATCACGCTTGTGGCGGACGTGGTCAAGGCTTATACCCAg < 2:434852/150‑1 (MQ=255) ccATCATCAGTGCTTCGTACCAGTTCGACCTGTGGGGCACCTTCAAGCGTGGTACAGAGGCTGCAAAGACAAATGCCGACGCGGTGCAGGCCGCTGCCCACACTGCCCGCATCACGCTCGTGGCGGACGCGGGCAAGGCTTATACCCAgg > 2:410691/1‑150 (MQ=255) caGTGCTTCGTACCAGTTCGACCTGTGGGGCACCTTCAAGCGTGGTACCGAGGCTGCCAAGGCAAATGCCGACGCGGTGCAGGCCGCTGCCGACACTGCCCGCATCACGCTTGTGGCGGACGTGGTCAAGGCTTATACCCAGGTGTGCTc < 1:201996/150‑1 (MQ=255) gTACCAGTTCGACCTGTGGGGCACCTTCAAGCGTGGTACCGAGGCTGCCAAGGCAAATGCCGACGCGGTGCAGGCCGCTGCCGACACTGCCCGCATCACGCTTGTGGCGGACGTGGTCAAGGCTTATACCCAGGTGTGCTCGGCCAACGa > 2:764802/1‑150 (MQ=255) tACCAGTTCGACCTGTGGGGCACCTTCAAGCGTGGTACCGAGGCTGCCAAGGCAAATGCCGACGCGGTGCAGGCCGCTGCCGACACTGCCCGCATCACGCTTGTGGCGGACGTGGTCAAGGCTTATACCCAGGTGTGCTCGGCCAACGAg > 1:1240970/1‑150 (MQ=255) ccAGTTCGACCTGTGGGGCACCTTCAAGCGTGGTACCGAGGCTGCCAAGGCAAATGCCGACGCGGTGCAGACCGCTGCCGACACTGCCCGCATCACGCTTGTGGCGGACGTGGTCAAGGCTTATACCCAGGTGTGCTCGGCCAACGAGGa > 2:327857/1‑150 (MQ=255) cGACCTGTGGGGCACCTTCAAGCGTGGTACCGAGGCTGCCAAGGCAAATGCCGACGCGGTGCAGGCCGCTGCCGACACTGCCCGCATCACGCTTGTGGCGGACGTGGTCAAGGCTTATACCCAGGTGTGCTCGGCCAACGAGGAATACca < 1:764802/150‑1 (MQ=255) cTGTGGGGCACCTTCAAGCGTGGTACCGAGGCTGCCAAGGCAAATGCCGACGCGGTGCAGGCCGCTGCCGACACTGCCCGCATCACGCTTGTGGCGGACGTGGTCAAGGCTTATACCCAGGTGTGCTCGGCCAACGAGGAATACca > 1:238162/1‑146 (MQ=255) cTGTGGGGCACCTTCAAGCGTGGTACCGAGGCTGCCAAGGCAAATGCCGACGCGGTGCAGGCCGCTGCCGACACTGCCCGCATCACGCTTGTGGCGGACGTGGTCAAGGCTTATACCCAGGTGTGCTCGGCCAACGAGGAATACca < 2:238162/146‑1 (MQ=255) tgtgGGGCACCTTCAAGCGTGGTACCGAGGCTGCCAAGGCAAATGCCGACGCGGTGCAGGCCGCTGCCGACACTGCCCGCATCACGCTTGTGGCGGACGTGGTCa < 2:229207/105‑1 (MQ=255) tgtgGGGCACCTTCAAGCGTGGTACCGAGGCTGCCAAGGCAAATGCCGACGCGGTGCAGGCCGCTGCCGACACTGCCCGCATCACGCTTGTGGCGGACGTGGTCa > 1:229207/1‑105 (MQ=255) ggggCACCTTCAAGCGTGGTACCGAGGCTGCCAAGGCAAATGCCGACGCGGTGCAGGCCGCTGCCGACACTGCCCGCATCACGCTTGTGGCGGACGTGGTCAAGGCTta < 1:629510/109‑1 (MQ=255) ggggCACCTTCAAGCGTGGTACCGAGGCTGCCAAGGCAAATGCCGACGCGGTGCAGGCCGCTGCCGACACTGCCCGCATCACGCTTGTGGCGGACGTGGTCAAGGCTta > 2:629510/1‑109 (MQ=255) ccTTCAAGCGTGGTACCGAGGCTGCCAAGGCAAATGCCGACGCGGTGCAGGCCGCTGCCGACACTGCCCGCATCACGCTTGTGGCGGACGTGGTCAAGGCTTATACCCAGGTGTGCTCGGCCAACGAGGAATACCACATTGCCCGTGAGt < 1:371363/150‑1 (MQ=255) cTTCAAGCGTGGTACCGAGGCTGCCAAGGCAAATGCCGACGCGGTGCAGGCCGCTGCCGACACTGCCCGCATCACGCTTGTGGCGGACGTGGTCAAGGCTTATACCCAGGTGTGCTCGGCCAACGAGGAATACCACATTGCCCGt > 2:248972/1‑145 (MQ=255) cTTCAAGCGTGGTACCGAGGCTGCCAAGGCAAATGCCGACGCGGTGCAGGCCGCTGCCGACACTGCCCGCATCACGCTTGTGGCGGACGTGGTCAAGGCTTATACCCAGGTGTGCTCGGCCAACGAGGAATACCACATTGCCCGt < 1:248972/145‑1 (MQ=255) cTTCAAGCGTGGTACCGAGGCTGCCAAGGCAAATGCCGACGCGGTGCAGGCCGCTGCCGACACTGCCCGCATCACGCTTGTGGCGGACGTGGTCAAGGCTTATACCCAGGTGTGCTCGGCCAACGAGGAATACCACATTGCCCGTGAGTc > 2:127080/1‑150 (MQ=255) ttCAAGCGTGGTACCGAGGCTGCCAAGGCAAATGCCGACGCGGTGCAGGCCGCTGCCGACACTGCCCGCATCACGCTTGTGGCGGACGTGGTCAAGGCTTATACCCAGGTGTGCTCGGCCAACGAGGAATACCACAtt > 2:1170654/1‑138 (MQ=255) ttCAAGCGTGGTACCGAGGCTGCCAAGGCAAATGCCGACGCGGTGCAGGCCGCTGCCGACACTGCCCGCATCACGCTTGTGGCGGACGTGGTCAAGGCTTATACCCAGGTGTGCTCGGCCAACGAGGAATACCACAtt < 1:1170654/138‑1 (MQ=255) ttCAAGCGTGGTACCGAGGCTGCCAAGGCAAATGCCGACGCGGTGCAGGCCGCTGCCGACACTGCCCGCATCACGCTTGTGGCGGACGTGGTCAAGGCTTATACCCAGGTGTGCTCGGCCAACGAGGAATACCACATTGCCCGTGAGTcc > 1:1154488/1‑150 (MQ=255) aaGCGTGGTACCGAGGCTGCCAAGGCAAATGCCGACGCGGTGCAGGCCGCTGCCGACACTGCCCGCATCACGCTTGTGGCGGACGTGGTCAAGGCTTATACCCAGGTGTGCTCGGCCAACGAGGAATACCACATTGCCCGTGAGTCCCTc < 2:299099/150‑1 (MQ=255) aGCGTGGTACCGAGGCTGCCAAGGCAAATGCCGACGCGGTGCAGGCCGCTGCCGACACTGCCCGCATCACGCTTGTGGCGGACGTGGTCAAGGCTTATACCCAGGTGTGCTCGGCCAACGAGGAATACCACATTGCCCGTGAGTCCCTCg > 2:148520/1‑150 (MQ=255) aGCGTGGTACCGAGGCTGCCAAGGCAAATGCCGACGCGGTGCAGGCCGCTGCCGACACTGCCCGCATCACGCTTGTGGCGCACGTGGACAAGGCTTATACCCAGCTGTGCTCGCCCAACGAGGAATACCACATTGCCCGTGAGTCGCTCg > 2:570931/1‑150 (MQ=255) tGGTACCGAGGCTGCCAAGGCAAATGCCGACGCGGTGCAGGCCGCTGCCGACACTGCCCGCATCACGCTTGTGGCGGACGTGGTCAAGGCTTATACCCAGGTGTGCTCGGCCAACGAGGAATACCACATTGCCCGTTAGCCCCTCGAttt > 2:869136/1‑150 (MQ=255) ggTACCGAGGCTGCCAAGGCAAATGCCGACGCGGTGCAGGCCGCTGCCGACACTGCGCACATCACGCTTGTGGCGGACGCGGTCAAGGCTTAAACCCAGGTGTGCTCGGCCAACGAGGAATACCACATTGCCCGTGAGTCCCTCGAtttt > 2:382876/1‑149 (MQ=255) ccGAGGCTGCCAAGGCAAATGCCGACGCGGTGCAGGCCGCTGCCGACACTGCCCGCATCACGCTTGTGGCGGACGTGGTCAAGGCTTATACCCAGGTGTGCTCGGCCAACGAGGAATACCACATTGCCCGTGAGTCCCTCGATTTGCAgg > 2:1062629/1‑150 (MQ=255) gAGGCTGCCAAGGCAAATGCCGACGCGGTGCAGGCCGCTGCCGACACTGCCCGCATCACGCTTGTGGCGGACGTGGTCAAGGCTTATACCCAGGTGTGCTCGGCCAACGAGGAATACCACATTGCCCGTGAGTCCCTCGATTTGCAGGAg < 1:297130/150‑1 (MQ=255) cTGCCAAGGCAAATGCCGACGCGGTGCAGGCCGCTGCCGACACTGCCCGCATCACGCTTGTGGCGGACGTGGTCAAGGCTTATACCCAGGTGTGCTCGGCCAACGAGGAATACCACATTGCCCGTGAGTCCCTCGATTTGCAGGAGCaaa < 1:148520/150‑1 (MQ=255) gCCAAGGCAAATGCCGACGCGGTGCAGGCCGCTGCCGACACTGCCCGCATCACGCTTGTGGCTGACGTGGTCCAGGCGTCTACCCAGGTGTGCTCGGCTAACGAGGAATACCACATTGCCCGTGAGTCCCTCGATTTGCAGGAGCAAAGc < 1:410691/150‑1 (MQ=255) ccAAGGCAAATGCCGACGCGGTGCAGGCCGCTGCCGACACTGCCCGCATCACGCTTGTGGCGGACGTGGTCAAGGCTTATACCCAGGTGTGCTCGGCCAACGAGGAATACCACATTGCCCGTGAGTccc < 1:857111/129‑1 (MQ=255) ccAAGGCAAATGCCGACGCGGTGCAGGCCGCTGCCGACACTGCCCGCATCACGCTTGTGGCGGACGTGGTCAAGGCTTATACCCAGGTGTGCTCGGCCAACGAGGAATACCACATTGCCCGTGAGTccc > 2:857111/1‑129 (MQ=255) ccAAGGCAAATGCCGACGCGGTGCAGGCCGCTGCCGACACTGCCCGCATCACGCTTGTGGCGGACGTGGTCAAGGCTTATACCCAGGTGTGCTCGGCCAACGAGGAATACCACATTGCCCGTGAGTCCCTCGATTTGCAGGAGCAAAGCg < 2:1240970/150‑1 (MQ=255) ccAAGGCAAATGCCGACGCGGTGCAGGCCGCTGCCGACACTGCCCGCATCACGCTTGTGGCGGACGTGGTCAAGGCTTATACCCAGGTGTGCTCGGCCAACGAGGAATACCACATTGCCCGTGAGTCCCTCGATTTGCAGGAGCAAAGCg > 1:892547/1‑150 (MQ=255) gCAAATGCCGACGCGGTGCAGGCCGCTGCCGACACTGCCCGCATCACGCTTGTGGCGGACGTGGTCAAGGCTTATACCCAGGTGTGCTCGGCCAACGAGGAATACCACATTGCCCGTGAGTCCCTCGATTTGCAGGAGCAAAGCGTGaaa < 1:869136/150‑1 (MQ=255) tGCCGACGCGGTGCAGACCGCTGCCGACACTGCCCGCATCACGCTTGTGGCGGACGTGGTCAAGGCTTATACCCAGGTGTGCTCGGCCAACGAGGAATACCACATTGCCCGTGAGTCCCTCGATTTGCAGGAGCAAAGCGTGAAACTCaa < 1:327857/150‑1 (MQ=255) gACGCGGTGCAGGCCGCTGCCGACACTGCCCGCATCACGCTTGTGGCGGACGTGGTCAAGGCTTATACCCAGGTGTGCTc < 2:30873/80‑1 (MQ=255) gACGCGGTGCAGGCCGCTGCCGACACTGCCCGCATCACGCTTGTGGCGGACGTGGTCAAGGCTTATACCCAGGTGTGCTc > 1:30873/1‑80 (MQ=255) aCGCGGTGCAGGCCGCTGCCGACACTGCCCGCATCACGCTTGTGGCGGACGTGGTCAAGGCTTATACCCAGGTGTGCTCGGCCAACGAGGAATACCACATTGCCCGTGAGTCCCTCGATTTGCAGGAGCAAAGCGTGAAACTCAACCAgc > 1:459121/1‑150 (MQ=255) ggTGCAGGCCGCTGCCGACACTGCCCGCATCACGCTTGTGGCGGACGTGGTCAAGGCTTATACCCAGGTGTGCTCGGCCAACGAGGAATACCACATTGCCCGTGAGTCCCTCGATTTGCAGGAGCAAAGCGTGAAACTCAACCAGCGCCt < 2:805550/150‑1 (MQ=255) gTGCAGGCCGCTGCCGACACTGCCCGCATCACGCTTGTGGCGGACGTGGTCAAGGCTTATACCCAGGTGTGCTCGGCCAACGAGGAATAc < 1:389027/90‑1 (MQ=255) gTGCAGGCCGCTGCCGACACTGCCCGCATCACGCTTGTGGCGGACGTGGTCAAGGCTTATACCCAGGTGTGCTCGGCCAACGAGGAATAc > 2:389027/1‑90 (MQ=255) gCCGCTGCCGACACTGCCCGCATCACGCTTGTGGCGGACGTGGTCAAGGCTTATACCCAGGTGTGCTCGGCCAACGAGGCATAGCACATTGCCCGTGAGTCCCTCGATTTGCAGGAGCAAAGCGTGAAAATCAACCAGCGCCTGCGCGAt > 1:541845/1‑150 (MQ=255) cGACACTGCCCGCATCACGCTTGTGGCGGACGTGGTCAAGGCTTATACCCAGGTGTGCTCGGCCAACGAGGAATACCACATTGCCCGTGAGTCCCTCGATTTGCAGGAGCAAAGc > 2:98916/1‑115 (MQ=255) cGACACTGCCCGCATCACGCTTGTGGCGGACGTGGTCAAGGCTTATACCCAGGTGTGCTCGGCCAACGAGGAATACCACATTGCCCGTGAGTCCCTCGATTTGCAGGAGCAAAGc < 1:98916/115‑1 (MQ=255) cGACACTGCCCGCATCACGCTTGTGGCGGACGTGGTCAAGGCTTATACCCAGGTGTGCTCGGCCAACGAGGAATACCACATTGCCCGTGAGTCCCTCGATTTGCAGGAGCAAAGCGTGAAACTCAAc > 2:399510/1‑127 (MQ=255) cGACACTGCCCGCATCACGCTTGTGGCGGACGTGGTCAAGGCTTATACCCAGGTGTGCTCGGCCAACGAGGAATACCACATTGCCCGTGAGTCCCTCGATTTGCAGGAGCAAAGCGTGAAACTCAAc < 1:399510/127‑1 (MQ=255) gACACTGCCCGCATCACGCTTGTGGCGGACGTGGTCAAGGATTATACCCAGGTGTGCTCGGCCAACGAGGAATACCACATTGCCCGTGAGTCCCTCGATTTGCAGGAGCAAAGCGTGAAACTCAACCAGCGCCTGCGCGATGCTGGGCGt > 1:1224959/1‑150 (MQ=255) cacTGCCCGCATCCCGCTTGTGGCGGCCGTGGTCAAGGCTTATACCCAGGGGTGCTCGGCCAACGAGGAATACCACATTGCCCGTGAGTCCCTCGATTTGCAGGAGCAAAGCGTGAAACTCAACCAGCGCCTGCGCGATGCTGGGCGTgg < 1:570931/150‑1 (MQ=255) cacTGCCCGCATCACGCTTGTGGCGGACGTGGTCAAGGCTTATACCCAGGTGTGCTCGGCCAACGAGGAATACCACATTGCCCGTGAGTCCCTCGATTTGCAGGAGCAAAGCGTGAAACTCAACCAGCGCCTGCGCGATGCTGGGCGTgg < 1:127080/150‑1 (MQ=255) cacTGCCCGCATCACGCTTGTGGCGGACGTGGTCAAGGCTTATACCCAGGTGTGCTCGGCCAACGAGGAATACCACATTGCCCGTGAGTCCCTCGATTTGCAGGAGCAAAGCGTGAAACTCAACCAGCGCCTGCGCGATGCTGGGCGTgg > 2:879005/1‑150 (MQ=255) cacTGCCCGCATCACGCTTGTGGCGGACGTGGTCAAGGCTTATACCCAGGTGTGCTCGGCCAACGAGGAATACCACATTGCCCGTGAGTCCCTCGATTTGCAGGAGCAAAGCGTGAAACTCAACCAGCGCCTGCGCGATGCTGGGCGTgg > 2:3671/1‑150 (MQ=255) gctcGCATCCCGCGTGTGGCGGACGTCGTCAAGGCTTACATCCAGGTGTGCTCGGCCAACGAGGAATGCCACATTGCCCGTGAGGCCCTCGATTTGCAGGAGCAGAGCGTGAAACTCAACCAGCGCCTGCGCGATGCTGGGCGTGGCGAt < 2:408359/147‑1 (MQ=255) ccGCATCACGCTTGTGGCGGACGTGGTCAACCCTCAAACATCCGCATGCTGCGGCATCGAGGAATACCACATAGCCCGTGAGTCCCTCGATTTGCAGGAGCAAAGCGTGAAACTAAACCAGCGCCTGCTCGATGCTGGGCGTGGCGATGa > 1:223425/1‑150 (MQ=255) gCATCACGCTTGTGGCGGACGTGGTCAAGGCTTATACCCAGgt < 1:128657/43‑1 (MQ=255) gCATCACGCTTGTGGCGGACGTGGTCAAGGCTTATACCCAGgt > 2:128657/1‑43 (MQ=255) cACGCTTGTGGTGGACGTGGTCAAGGCTTATACCCAGGTGTGCTCGGCCAACGAGGAATACCACATTGCCCGTGAGTCCCTCGATTTGCAGGAGCAAAGCGTGAAACTCAACCAGCGCCTgcgc > 2:625707/1‑124 (MQ=255) cACGCTTGTGGTGGACGTGGTCAAGGCTTATACCCAGGTGTGCTCGGCCAACGAGGAATACCACATTGCCCGTGAGTCCCTCGATTTGCAGGAGCAAAGCGTGAAACTCAACCAGCGCCTgcgc < 1:1269133/124‑1 (MQ=255) cACGCTTGTGGTGGACGTGGTCAAGGCTTATACCCAGGTGTGCTCGGCCAACGAGGAATACCACATTGCCCGTGAGTCCCTCGATTTGCAGGAGCAAAGCGTGAAACTCAACCAGCGCCTgcgc > 2:1269133/1‑124 (MQ=255) cACGCTTGTGGTGGACGTGGTCAAGGCTTATACCCAGGTGTGCTCGGCCAACGAGGAATACCACATTGCCCGTGAGTCCCTCGATTTGCAGGAGCAAAGCGTGAAACTCAACCAGCGCCTgcgc < 1:625707/124‑1 (MQ=255) aCGCTTGTGGCGGACGTGGTCAAGGCTTATACCCAGGTGTGCTCGGCCAACGAGGAATACCACATTGCCCGTGAGTCCCTCGATTTGCAGGAGCAAAGCGTGAAACTCAACCAGCGCCTGCGCGATGCTGGGCGTGGCGATGAAACCCAg < 2:1154488/150‑1 (MQ=255) aCGCTTGTGGCGGACCTGGTCAAGGCTTATACCCAGGTGTGCTCGGCCAACGAGGAATACCACATTGCCCGTGAGTCCCTCGATTTGCAGGAGCAAAGCGTGAAACTCAACCAGCGCCTGCGCGATGCTGGGCGTGGCGATGAAACCCAg < 2:892547/150‑1 (MQ=255) gtgGCGGACGTGGTCAAGGCTTATACCCAGGTGTGCTCGGCCAACGAGGAATACCACATTGCCCGTGAGTCCCTCGATTTGCAGGAGCAAAGCGTGAAACTCAACCAGCGCCTGCGCGATGCTGGGCGTGGCGATGAAACCCAGGTCAct < 1:167128/150‑1 (MQ=255) gCGGACGTGGTCAAGGCTTATACCCAGGTGTGCTCGGCCAACGAGGAATACCACATTGCCCGTGAGTCCCTCGATTTGCAGGAGCAAAGCGTGAAACTCAACCAGCGCCTGCGCGATGCTGGGCGTGGCGATGAAACCCAGGTCActcgc < 1:3671/150‑1 (MQ=255) | GGTGCCGGTAGCCAACATCGGTGAGGCCATCATCAGTGCTTCGTACCAGTTCGACCTGTGGGGCACCTTCAAGCGTGGTACCGAGGCTGCCAAGGCAAATGCCGACGCGGTGCAGGCCGCTGCCGACACTGCCCGCATCACGCTTGTGGCGGACGTGGTCAAGGCTTATACCCAGGTGTGCTCGGCCAACGAGGAATACCACATTGCCCGTGAGTCCCTCGATTTGCAGGAGCAAAGCGTGAAACTCAACCAGCGCCTGCGCGATGCTGGGCGTGGCGATGAAACCCAGGTCACTCGC > NC_002947/230714‑231011 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |