Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_002947 3,479,633 C→T 7.1% L543L (TTG→TTA)  PP_3090 ← OmpA domain‑containing protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0029473,479,6330CT 7.1% 162.5 / 2.4 58L543L (TTG→TTA) PP_3090OmpA domain‑containing protein
Reads supporting (aligned to +/- strand):  ref base C (30/23);  new base T (2/2);  total (32/26)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.42e-01

GGGCAGCGCCTCGGCCTCTACGCTGTCAATGCCGCTCACTGGCTGCAGCTCACGGGTGTTGCGCTGGTAGACCTTGAGCGTGGTCAGCAGGTACAGGGTGCGGGTCAGATTATCGGCCGTGGGCTTTAGCATCACGTTCTGCAACGTGGCGAAGTAGCGGTCGCGCAGCAGCGGCTCGACCTCATGGCCCTGGTACAGGCCCAGGCGCATGCCGAGGGGCACGCCCTTAGCGTGGTGTTGCTCATGGTAGTGAGCAGCCCAGAAGCGCAAGCGGTCGAGGCTTCGCCAGG  >  NC_002947/3479492‑3479781
                                                                                                                                             |                                                                                                                                                    
gggCAGCGCCTCGGCCTCTACGCTGTCAATGCCGCTCACTGGCTGCAGCTCACGGGTGTTGCGCTGGTAGACCTTGAGCGTGGTCAGCAGGTACAGGGTGCGGGTCAGATTATCGGCCGTGGGCTTTAGCATCACGTTCTGCAACGTGGc                                                                                                                                              >  2:388743/1‑150 (MQ=255)
        ccTCGGCCTCTACGCTGTCAATGCCGCTCACTGGCTGCAGCTCACGGGTGTTGCGCTGGTAGACCTTGAGCGTGGTCAGCAGGTACAGGGTGCGGGTCAGATTATCGGCCGTGGGCTTTAGCATCACGTTCTGCAACGTGGCGAAGTAGc                                                                                                                                      <  1:531111/150‑1 (MQ=255)
           cGGCCTCTACGCTGTCAATGCCGCTCACTGGCTGCAGCTCACGGGTGTTGCGCTGGTAGACCTTGAGCGTGGTCAGCAGGTACAGGGTGCGGGTCAGATTATCGGCCGTGGGCTTTAGCATCACGTTCTGCAACGTGGCGAAGTAGCGGt                                                                                                                                   >  2:745774/1‑150 (MQ=255)
                  tACGCTGTCAATGCCGCTCACTGGCTGCAGCTCACGGGTGTTGCGCTGGTAGACCTTGAGCGTGGTCAGCAGGTACAGGGTGCGGGTCAGATTATCGGCCGTGGGCTTTAGCATCACGTTCTGCAACGTGGCGAAGTAGCGGTCGCgcag                                                                                                                            >  2:351291/1‑150 (MQ=255)
                   aCGCTGGCAAGGCCGCTGACTGGCTGCAGCTCACGGGTGTTGCGCTGGTAGACCTTGAGCGTGGTCAGCAGGTACAGGGTGCGGGTCAGATTATCGGCCGTGGGCTTTAGCATCACGTTCTGCAACGTGGCGAAGTAGCGGTCGCgcagc                                                                                                                           <  2:278495/150‑1 (MQ=255)
                         tCAATGCCGCTCACTGGCTGCAGCTCACGGGTGTTGCGCTGGTAGACCTTGAGCGTGGTCAGCAGGTACAGGGTGCGGGTCAGATTATCGGCCGTGGGCTTTAGCATCACGTTCTGCAACGTGGCGAAGTAGCGGTCGCGCAGCAGCGGc                                                                                                                     >  2:733475/1‑150 (MQ=255)
                           aaTGCCGCTCACTGGCTGCAGCTCACGGGTGTTGCGCTGGTAGACCTTGAGCGTGGTCAGCAGGTACAGGGTGCGGGTCAGATTATCGGCCGTGGGCTTTAGCATCACGTTCTGCAACGTGGCGAAGTAGCGGTCGCGCAGCAGCGGCTc                                                                                                                   >  2:480092/1‑150 (MQ=255)
                                cGCTCACTGGCTGCAGCTCACGGGTGTTGCGCTGGTAGACCTTGAGCGTGGTCAGCAGGTACAGGGTGCGGGTCAGATTATCGGCCGTGGGCTTTAGCATCACGTTCTGCAACGTGGCGAAGTAGCGGTCGCGCAGCAGCGGCTCGACCt                                                                                                              >  2:1166770/1‑150 (MQ=255)
                                  cTCACTGGCTGCAGCTCACGGGTGTTGCGCTGGTAGACCTTGAGCGTGGTCAGCAGGTACAGGGTGCGGGTCAGATTATCGGCCGTGGGCTTTAGCATCACGTTCTGCAACGTGGCGAAGTAGCGGTCGCGCAGCAGCGGCTCGACCTCa                                                                                                            >  2:897328/1‑150 (MQ=255)
                                     aCTGGCTGCAGCTCACGGGTGTTGCGCTGGTAGACCTTGAGCGTGGTCAGCAGGTACAGGGTGCGGGTCAGATTATCGGCCGTGGGCTTTAGCATCACGTTCTGTAACGTGGCGAAGTAGCGGTCGCGCAGCAGCGGCTCGACCTCATgg                                                                                                         >  1:237222/1‑150 (MQ=255)
                                         gCTGCAGCTCACGGGTGTTGCGCTGGTAGACGTTAAGCGTGGTCAGCAGGTACAGGGGGCGGGTCAGATTATCGGCCGTGGGCTTTAGCATCACGTTCTGCAACGTGGCGAAGTAGCGGTCGCGCAGCAGCGGCTCGACCTCATGGCCCt                                                                                                     >  2:469117/1‑150 (MQ=255)
                                         gCTGCAGCTCACGGGTGTTGCGCTGGTAGACCTTGAGCGTGGTCAGCAGGTACAGGGTGCGGGTCAGATTATCGGCCGTGGGCTTTAGCATCACGTTCTGTAACGTGGCGAAGTAGCGGTCGCGCAGCAGCGGCTCGACCTCATGGCCCt                                                                                                     >  1:1013785/1‑150 (MQ=255)
                                                 tCACGGGTGTTGCGCTGGTAGACCTTGAGCGTGGTCAGCAGGTACAGGGTGCGGGTCAGATTATCGGCCGTGGGCTTTAGCATCACGTTCTGCAACGTg                                                                                                                                                <  2:1236036/99‑1 (MQ=255)
                                                 tCACGGGTGTTGCGCTGGTAGACCTTGAGCGTGGTCAGCAGGTACAGGGTGCGGGTCAGATTATCGGCCGTGGGCTTTAGCATCACGTTCTGCAACGTg                                                                                                                                                >  1:1236036/1‑99 (MQ=255)
                                                   aCGGGTGTTGCGCTGGTAGACCTTGAGCGTGGTCAGCAGGTACAGGGTGCGGGTCAGATTATCGGCCGTGGGCTTTAGCATCACGTTCTGCAACGt                                                                                                                                                 >  2:403333/1‑96 (MQ=255)
                                                   aCGGGTGTTGCGCTGGTAGACCTTGAGCGTGGTCAGCAGGTACAGGGTGCGGGTCAGATTATCGGCCGTGGGCTTTAGCATCACGTTCTGCAACGt                                                                                                                                                 <  1:403333/96‑1 (MQ=255)
                                                   aCGGGTGTTGCGCTGGTAGACCTTGAGCGTGGTCAGCAGGTACAGGGTGCGGGTCAGATTATCGGCCGTGGGCTTTAGCATCACGTTCTGCAACGTGGCGAAGTAGCGGTCGCGCAGCAGCGGCTCGACCTCATGGCCCTGGTACAGGcc                                                                                           >  1:1071351/1‑150 (MQ=255)
                                                   aCGGGTGTTGCGCTGGTAGACCTTGAGCGTGGTCAGCAGGTACAGGGTGCGGGTCAGATTATCGGCCGTGGGCTTTAGCATCACGTTCTGCAACGTGGCGAAGTAGCGGTCGCGCAGCAGCGGCTCGACCTCATGGCCCTGGTACAGGcc                                                                                           >  1:20040/1‑150 (MQ=255)
                                                          ttGCGCTGGTAGACCTTGAGCGTGGTCAGCAGGTACAGGGTGCGGGTCAGATTATCGGCCGTGGGCTTTAGCATCACGTTCTGCAACGTGGCGAAGTAGCGGTCGCGCAGCAGCGGCTCGACCTCATGGCCCTGGTACAGGCCCAGgcgc                                                                                    <  1:388743/150‑1 (MQ=255)
                                                          ttGCGCTGGTAGACCTTGAGCGTGGTCAGCAGGTACAGGGTGCGGGTCAGATTATCGGCCGTGGGCTTTAGCATCACGTTCTGCAACGTGGCGAAGTAGCGGTCGCGCAGCAGCGGCTCGACCTCATGGCCCTGGTACAGGCCCAGgcgc                                                                                    <  2:20040/150‑1 (MQ=255)
                                                             cgcTGGTAGACCTTGAGCGTGGTCAGCAGGTACAGGGTGCGGGTCAGATTATCGGCCGTGGGCTTTAGCATCACGTTCTGCAACGTGGCGAAGTAGCGGTCGCGCAGCAGCGGCTCGACCTCATGGCCCTGGTACAGGCCCAGGCGCATg                                                                                 >  1:468203/1‑150 (MQ=255)
                                                               cTGGTAGACCTTGAGCGTGGTCAGCAGGTACAGGGTGCGGGTCAGATTATCGGCCGTGGGCTTTAGCATCACGTTCTGCAACGTGGCGAAGTAGCGGTCGCGCAGCAGCGGCTCGACCTCATGGCCCTGGTACAGGCCCAGGCGCATGcc                                                                               <  1:897328/150‑1 (MQ=255)
                                                                  gTAGACCTTGAGCGTGGTCAGCAGGTACAGGGTGCGGGTCAGATTATCGGCCGTGGGCTTTAGCATCACGTTCTGCAACGTGGCGAAGTAGCGGTCGCGCAGCAGCGGCTCGACCTCATGGCCCt                                                                                                     <  1:57724/125‑1 (MQ=255)
                                                                  gTAGACCTTGAGCGTGGTCAGCAGGTACAGGGTGCGGGTCAGATTATCGGCCGTGGGCTTTAGCATCACGTTCTGCAACGTGGCGAAGTAGCGGTCGCGCAGCAGCGGCTCGACCTCATGGCCCt                                                                                                     >  2:57724/1‑125 (MQ=255)
                                                                  gTAGACCTTGAGCGTGGTCAGCAGGTACAGGGTGCGGGTCAGATTATCGGCCGTGGGCTTTAGCATCACGTTCTGCAACGTGGCGAAGTAGCGGTCGCGCAGCAGCGGCTCGACCTCATGGCCCTGGTACAGGCCCAGGCGCATGCCGAg                                                                            <  1:351291/150‑1 (MQ=255)
                                                                     gACCTTGAGCGTGGTCAGCAGGTACAGGGTGCGGGTCAGATTATCGGCCGTGGGCTTTAGCATCACGTTCTGCAACGTGGCGAAGTAGCGGTCGCGCAGCAGCGGCTCGACCTCATGGCCCTGGTACAGGCCCAGGCGCATGCCGAgggg                                                                         >  1:340903/1‑150 (MQ=255)
                                                                        cTTGAGCGTGGTCAGCAGGTACAGGGTGCGGGTCAGATTATCGGCCGTGGGCTTTAGCATCACGTTCTGTAACGTGGCGAAGTAGCGGTCGCGCAGCAGCGGCTCGACCTCATGGCCCTGGTACAGGCCCAGGCGCATGCCGAGGGGCAc                                                                      <  2:237222/150‑1 (MQ=255)
                                                                        cTTGAGCGTGGTCAGCAGGTACAGGGTGCGGGTCAGATTATCGGCCGTGGGCTTTAGCATCACGTTCTGCAACGTGGCGAAGTAGCGGTCGCGCAGCAGCGGCTCGACCTCATGGCCCTGGTACAGGCCCAGGCGCATGCCGAGGGGCAc                                                                      >  1:855754/1‑150 (MQ=255)
                                                                        cTTGAGCGTGGTCAGCAGGTACAGGGTGCGGGTCAGATTATCGGCCGTGGGCTTTAGCATCACGTTCTGCAACGTGGCGAAGTAGCGGTCGCGCAGCAGCGGCTCGACCTCATGGCCCTGGTACAGGCCCAGGCGCATGCCGAGGGGCAc                                                                      <  2:136198/150‑1 (MQ=255)
                                                                                  gTCAGCAGGTACAGGGTGCGGGTCAGATTATCGGCCGTGGGCTTTAGCATCACGTTCTGCAACGTGGCGAAGTAGCGGTCGCGCAGCAGCGGCTCGACCTCATGGCCCTGGTACAGGCCCAg                                                                                        >  1:56497/1‑122 (MQ=255)
                                                                                  gTCAGCAGGTACAGGGTGCGGGTCAGATTATCGGCCGTGGGCTTTAGCATCACGTTCTGCAACGTGGCGAAGTAGCGGTCGCGCAGCAGCGGCTCGACCTCATGGCCCTGGTACAGGCCCAg                                                                                        >  1:697996/1‑122 (MQ=255)
                                                                                  gTCAGCAGGTACAGGGTGCGGGTCAGATTATCGGCCGTGGGCTTTAGCATCACGTTCTGCAACGTGGCGAAGTAGCGGTCGCGCAGCAGCGGCTCGACCTCATGGCCCTGGTACAGGCCCAg                                                                                        <  2:56497/122‑1 (MQ=255)
                                                                                  gTCAGCAGGTACAGGGTGCGGGTCAGATTATCGGCCGTGGGCTTTAGCATCACGTTCTGCAACGTGGCGAAGTAGCGGTCGCGCAGCAGCGGCTCGACCTCATGGCCCTGGTACAGGCCCAg                                                                                        <  2:697996/122‑1 (MQ=255)
                                                                                    cagcagGTACAGGGTGCGGGTCAGATTATCGGCCGTGGGCTTTAGCATCACGTTCTGCAACGTGGCGAAGTAGCGGTCGCGCAGCAGCGGCTCGACCTCATGGCCCTGGTACAGGCCCAGGCGCATGCCGAGGGGCACGCCCTTAGCgtg                                                          <  2:1071351/150‑1 (MQ=255)
                                                                                       cagGTACAGGGTGTGGGTCAGATTATCGGCCGTGGGCTTTAGCATCACGTTCTGCAACGTGGCGAAGTAGCGGTCGCGTAGCAGCGGCTCGACCTCATGGCCCTGGTACAg                                                                                              <  2:16889/111‑1 (MQ=255)
                                                                                       cagGTACAGGGTGTGGGTCAGATTATCGGCCGTGGGCTTTAGCATCACGTTCTGCAACGTGGCGAAGTAGCGGTCGCGTAGCAGCGGCTCGACCTCATGGCCCTGGTACAg                                                                                              >  1:16889/1‑111 (MQ=255)
                                                                                       cagGTACAGGGTGCGGGTCAGATTATCGGCCGTGGGCTTTAGCATCACGTTCTGTAACGTGGCGAAGTAGCGGTCGCGCAGCAGCGGCTCGACCTCATGGCCATGGTACAGGCCCAGGCGCATGCCGAGGGGCCCGCACTTAGCgtgggt                                                       <  2:1013785/150‑3 (MQ=255)
                                                                                          gTACAGGGTGCGGGTCAGATTATCGGCCGTGGGCTTTAGCATCACGTTCTGCAACGTGGCGAAGTAGCGGTCGCGCAGCAGCGGCTCGACCTCATGGCCCTGGTACAGGCCCAGGCGCATGCCGAGGGGCACGCCCTTAGCGTGGTGTTg                                                    >  2:559428/1‑150 (MQ=255)
                                                                                          gTACAGGGTGCGGGTCAGATTATCGGCCGTGGGCTTTAGCATCACGTTCTGCAACGTGGCGAAGTAGCGGTCGCGCAGCAGCGGCTCGACCTCATGGCCCTGGTACAGGCCCAGGCGCATGCCGAGGGGCACGCCCTTAGCGTGGTGTTg                                                    >  2:42116/1‑150 (MQ=255)
                                                                                             cAGGGTGCGGGTCAGATTATCGGCCGTGGGCTTTAGCATCACGTTCTGCAACGTGGCGAAGTAGCGGTCGCGCAGCAGCGGCTCGACCTCATGGCCCTGGTACAGGCCCAGGCGCATGCCGAGGGGCACGCCCTTAGCGTGGTGTTGCTc                                                 >  1:1224021/1‑150 (MQ=255)
                                                                                              aGGGTGCGGGTCAGATTATCGGCCGTGGGCTTTAGCATCACGTTCTGCAACGTGGCGAAGTAGCGGTCGCGCAGCAGCGGCTCGACCTCATGGCCCTGGTACAGGCCCAGGCGCATGCCGAGGGGCACGCCCTTAGCGTGGTGTTGCTCa                                                >  2:731240/1‑150 (MQ=255)
                                                                                               gggTGCGGGTCAGATTATCGGCCGTGGGCTTTAGCATCACGTTCTGCACCGCCGCCTAGTAGCGGTCGCGCAGCAGCGGCTCGACCTCATGGCCCTGGTACAGGCCCAGGCGCATGCCGAGGGGCACGCCCTTAGCGTGGTGTTGCTCAt                                               >  2:954795/1‑150 (MQ=255)
                                                                                                ggTGCGGGTCAGATTATCGGCCGTGGGCTTTAGCATCACGTTCTGCAACGTGGCGAAGTAGCGGTCGCGCAGCAGCGGCTCGACCTCATGGCCCTGGTACAGGCCCAGGCGCATGCCGAGGGGCACGCCCTTAGCGTGGTGTTGCTCATg                                              <  2:340903/150‑1 (MQ=255)
                                                                                                 gTGCGGGTCAGATTATCGGCCGTGGGCTTTAGCATCACGTTCTGCAACGTGGCGAAGTAGCGGTCGCGCAGCAGCGGCTCGACCTCATGGCCCTGGTACAGTCCCAGGCGCATGCCGAGGGGCACGCCCTTAGCGTGGTGTTGCTCATgg                                             <  1:733475/150‑1 (MQ=255)
                                                                                                 gTGCGGGTCAGATTATCGGCCGTGGGCTTTAGCATCACGTTCTGCAACGTGGCGAAGTAGCGGTCGCGCAGCAGCGGCTCGACCTCATGGCCCTGGTACAGGCCCAGGCGCATGCCGAGGGGCACGCCCTTAGCGTGGTGTTGCTCATgg                                             <  1:953264/150‑1 (MQ=255)
                                                                                                   gtgggCCAGATTATCGGGCGTGGGCTTTAGCATCACGTTCTGGAACGTGGCGACGTGGACGTCGTGCAGCAGCCGCTCGACCTCATGGCCGTGGTACAGGCTCTCGCGCATGCCGAGGGGCACGCCTTTAGCGTGGTGTTGCTCATGGTa                                           <  2:262894/148‑1 (MQ=255)
                                                                                                        tCAGATTATCGGCCGTGGGCTTTAGCATCACGTTCTGCAACGTGGCGAAGTAGCGGTCGCGCAGCAGCGGCTCGACCTCATGGCCCTGGTACAGGCCCAGGCGCATGCCGAGGGGCACGCCCTTAGCGTGGTGTTGCTCATGGTAGTGag                                      >  2:753630/1‑150 (MQ=255)
                                                                                                        tCAGATTATCGGCCGTGGGCTTTAGCATCACGTTCTGCAACGTGGCGAAGTAGCGGTCGCGCAGCAGCGGCTCGACCTCATGGCCCTGGTACAGGCCCAGGCGCATGCCGAGCGGCACGCCCTTAGCGTGGTGTTGCTCATGCTAGTGag                                      <  2:16670/150‑1 (MQ=255)
                                                                                                          aGATTATCGGCCGTGGGCTTTAGCATCACGTTCTGCAACGTGGCGAAGTAGCGGTCGCGCAGCAGCGGCTCGACCTCATGGCCCTGGTACAGGCCCAGGCGCATGCCGAGGGGCACGCCCTTAGCGTGGTGTTGCTCATGGTAGTGagca                                    <  1:745774/150‑1 (MQ=255)
                                                                                                                            tttAGCATCACGTTCTGCAACGTGGCGAAGTAGCGGTCGCGCAGCAGCGGCTCGACCTCATGGCCCTGGTACAGGCCCAGGCGCATGCCGA‑GGGCACGCCCTTAGCGTGGTGTTGCTCATGGTAGTGAGCAGCCCAGAAGCGCAAGCGGt                 >  2:149528/1‑150 (MQ=255)
                                                                                                                            tttACCATCACGTTCTGCAACGTGGCGAAGTAGCGGTCGCGCCGCAGCGGCTCGACCTCATGGCCCTAGTACAGGCCCAGGCGCATGCCCAGGGGCACGCCCTTAGCGTGGTGTTGCTCATGGTAGTGAGCAGCCCAGAAGCGCAAGCgg                  <  1:233703/150‑1 (MQ=255)
                                                                                                                                gCATCACGTTCTGCAACGTGGCGAAGTAGCGGTCGCGCAGCAGCGGCTCGACCTCATGGCCCTGGTACAGGCCCAGGCGCATGCCGAGGGGCACGCCCTTAGCGTGGTGTTGCTCATGGTAGTGAGCAGCCCAGAAGCGCAAGCGGTCGa              <  1:42116/150‑1 (MQ=255)
                                                                                                                                   tCACGTTCTGCAACGTGGCGAAGTAGCGGTCGCGCAGCAGCGGCTCGACCTCATGGCCCTGGTACAGGCCCAGGCGCATGCCGAGGGGCACGCCCTTAGCGTGGTGTTGCTCATGGTAGTGAGCAGCCCATAAGCGCAAGCGGTCGAGGc           >  1:91982/1‑150 (MQ=255)
                                                                                                                                   tCACGTTCTGCAACGTGGCGAAGTAGCGGTCGCGCAGCAGCGGCTCGACCTCATGGCCCTGGTACAGGCCCAGGCGCATGCCGAGGGGCACGCCCTTAGCGTGGTGTTGCTCATGGTAGTGAGCAGCCCAGAAGCGCAAGCGGTCGAGGc           >  2:161775/1‑150 (MQ=255)
                                                                                                                                      cGTTCTGCAACGTGGCGAAGTAGCGGTCGCGCAGCAGCGGCTCGACCTCATGGCCCTGGTACAGGCCCAGGCGCATGCCGAGGGGCACGCCCTTAGCGTGGTGTTGCTCATGGTAg                                          >  2:1219784/1‑116 (MQ=255)
                                                                                                                                      cGTTCTGCAACGTGGCGAAGTAGCGGTCGCGCAGCAGCGGCTCGACCTCATGGCCCTGGTACAGGCCCAGGCGCATGCCGAGGGGCACGCCCTTAGCGTGGTGTTGCTCATGGTAg                                          <  1:1219784/116‑1 (MQ=255)
                                                                                                                                        ttCTGCAACGTGGCGAAGTAGCGGTCGCGCAGCAGCGGCTCGACCTCATGGCCCTGGTACAGGCCCAGGCGCATGCCGAGGGGCACGCCCTTAGCGTGGTGTTGCTCATGGTAGTGAGCAGCCCAGAAGCGCAAGCGGTCGAGGCTTCGc      <  1:161775/150‑1 (MQ=255)
                                                                                                                                            gCAACGTGGCGAAGTAGCGGTCGCGCAGCAGCGGCTCGACCTCATGGCCCTGGTACAGGCCCAGGCGCATGCCGAGGGGCACGCCCTTAGCGTGGTGTTGCTCATGGTAGTGAGCAGCCCAGAAGCGCAAGCGGTCGAGGCTTCGCCAgg  >  1:945025/1‑150 (MQ=255)
                                                                                                                                             |                                                                                                                                                    
GGGCAGCGCCTCGGCCTCTACGCTGTCAATGCCGCTCACTGGCTGCAGCTCACGGGTGTTGCGCTGGTAGACCTTGAGCGTGGTCAGCAGGTACAGGGTGCGGGTCAGATTATCGGCCGTGGGCTTTAGCATCACGTTCTGCAACGTGGCGAAGTAGCGGTCGCGCAGCAGCGGCTCGACCTCATGGCCCTGGTACAGGCCCAGGCGCATGCCGAGGGGCACGCCCTTAGCGTGGTGTTGCTCATGGTAGTGAGCAGCCCAGAAGCGCAAGCGGTCGAGGCTTCGCCAGG  >  NC_002947/3479492‑3479781

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑