| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 1970782 | 59 (0.950) | 19 (0.360) | 15/222 | 3.1 | 28.4% | intergenic (+33/‑233) | mtnA/PP_mr25 | methylthioribose‑1‑phosphate isomerase/gyrA regulatory region |
| ? | NC_002947 | = 1970844 | 46 (0.870) | intergenic (+95/‑171) | mtnA/PP_mr25 | methylthioribose‑1‑phosphate isomerase/gyrA regulatory region | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
GAGGTGTTCAACCCGGTGTTCGATGTAACGCCGGCCGACCTGATCGATGTGATCGTGACCGAACGCGGCATCGTCGAGCGCCCGGATGCTGCCAAGCTGGCTCAGCTGGTTTGCCGCAAGCGCCTGCACTGATTTTGTATCGCCT‑CACCGGCCTCTTCGCGGGCT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/1970618‑1970782‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑caccggcctcttcgcgggctCGCCCGCCCCCACAGGTTCACCACGGCCCTAAGGCCATGCGATATCCCAGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGGTGAGGCGATACAAAATCAGTGCAGGCGCTTGCGGCAAACCAGCTGAGCCAGCTTGGCAGCATCCGG < NC_002947/1970844‑1970699 GAGGTGTTCAACCCGGTGTTCGATGTAACGCCGGCCGACCTGATCGATGTGATCGTGACCGAACGCGGCATCGTCGAGCGCCCGGATGCTGCCAAGCTGGCTCAGCTGGTTTGCCGCAAGCGCCTGCACTGATTTTGTATCGCCT‑CACCG > 1:1307760/1‑150GAGGTGTTCAACCCGGTGTTCGATGTAACGCCGGCCGACCTGATCGATGTGATCGTGACCGAACGCGGCATCGTCGAGCGCCCGGATGCTGCCAAGCTGGCTCAGCTGGTTTGCCGCAAGCGCCTGCACTGATTTTGTATCGCCT‑CACCG > 1:197999/1‑150 TTCAACCCGGTGTTCGATGTAACGCCGGCCGACCTGATCGATGTGATCGTGACCGAACGCGGCATCGTCGAGCGCCCGGATGCTGCCAAGCTGGCTCAGCTGGTTTGCCGCAAGCGCCTGCACTGATTTTGTATTGCCTGCACCGGCCTC > 1:465457/1‑150 TTCAACCCGGTGTTCGATGTAACGCCGGCCGACCTGATCGATGTGATCGTGACCGAACGCGGCATCGTCGAGCGCCCGGATGCTGCCAAGCTGGCTCAGCTGGTTTGCCGCAAGCGCCTGCACTGATTTTGTATCGCCT‑CACCGGCCTCT > 2:945586/1‑150 ACCCGGTGTTCGATGTAACGCCGGCCGACCTGATCGATGTGATCGTGACCGAACGCGGCATCGTCGAGCGCCCGGATGCTGCCAAGCTGGCTCAGCTGGTTTGCCGCAAGCGCCTGCACTGATTTTGTATCGCCT‑CACCGGCCTCTTCGC < 2:578671/150‑1 CCCGGTGTTCGATGTAACGCCGGCCGACCTGATCGATGTGATCGTGACCGAACGCGGCATCGTCGAGCGCCCGGATGCTGCCAAGCTGGCTCAGCTGGTTTGCCGCAAGCGCCTGCACTGATTTTGTATCGCCT‑CACCGGCCTCTTCGCG > 1:773101/1‑150 CGGTGTTCGATGTAACGCCGGCCGACCTGATCGATGTGATCGTGACCGAACGCGGCATCGTCGAGCGCCCGGATGCTGCCAAGCTGGCTCAGCTGGTTTGCCGCAAGCGCCTGCACTGATTTTGTATCGCCT‑CACCGGCCTCTTCGCGGG < 1:645117/150‑1 GGTGTTCGATGTAACGCCGGCCGACCTGATCGATGTGATCGTGACCGAACGCGGCATCGTCGAGCGCCCGGATGCTGCCAAGCTGGCTCAGCTGGTTTGCCGCAAGCGCCTGCACTGATTTTGTATCGCCT‑CACCGGCCTCTTCGCGGGC < 1:1503873/150‑1 GATCGATGTGATCGTGACCGAACGCGGCATCGTCGAGCGCCCGGATGCTGCCAAGCTGGCTCAGCTGGTTTGCCGCAAGCGCCTGCACTGATTTTGTATCGCCT‑CACCGGCCTCTTCGCGGGCTCGCCCGCCCCCACAGGTTCACCACGG > 2:986301/1‑150 ATCGTGACCGAACGCGGCATCGTCGAGCGCCCGGATGCTGCCAAGCTGGCTCAGCTGGTTTGCCGCAAGCGCCTGCACTGATTTTGTATCGCCT‑CACCGGCCTCTTTGCGGGCTCGCCCGCCCCCACAGGTTCACCACGGCCCTAAGGCC > 2:1570920/1‑150 aTCGAGCGCCCGGATGCTGCCAAGCTGGCTCAGCTGGTTTGCCGCAAGCGCCTGCACTGATTTTGTATTGCCTGCACCGGCCTCTTCGCGGGCTCGCCCGCCCCCACAGGTTCACCACGGCCCTAAGGCCATGCGATATCCCAGTGGGct > 1:55632/2‑148 TCGAGCGCCCGGATGCTGCCAAGCTGGCTCAGCTGGTTTGCCGCAAGCGCCTGCACTGATTTTGTATCGCCT‑CACCGGCCTCTTCGCGGGCTCGCCCGCCCCCACAGGTTCACCACGGCCCTAAGGCCATGCGATATCCCAGTGGGAGCG < 2:197999/150‑1 ggcCGCCCGGATGCTGCCAAGCTGGCTCAGCTTGTTTGCCGCAGGCGCCTGCACTGATTTTGTATTGCCTGCACCGGCCTCTGCGCGGGCTGGAGCTCCCCCACAGGTTTTCCACGGCCCTAAGGCCATGCGATATCCCAGTGGGAGCGG < 2:55632/147‑1 CCCGGATGCTGCCAAGCTGGCTCAGCTGGTTTGCCGCAAGCGCCTGCACTGATTTTGTATCGCCT‑CCACGCCGTGTATGCGGGCTCGCCCGCCCCCACAGGTTCACCACGGCCCTAAGGCCATGCGATATCCCAGTGGGAGCGGGCAAGC < 1:986301/150‑1 CCCGGATGCTGCCAAGCTGGCTCAGCTGGTTTGCCGCAAGCGCCTGCACTGATTTTGTATCGCCT‑CACCGGCCTCTTTGCGGGCTCGCCCGCCCCCACAGGTTCACCACGGCCCTAAGGCCATGCGATATCCCAGTGGGAGCGGGCAAGC < 1:1570920/150‑1 CCGGATGCTGCCAAGCTGGCTCAGCTGGTTTGCCGCAAGCGCCTGCACTGATTTTGTATCGCCT‑CACCGGCCTCTTCGCGGGCTCGCCCGCCCCCACAGGTTCACCACGGCCCTAAGGCCATGCGATATCCCAGTGGGAGCGGGCAAGCC < 2:1307760/150‑1 TCAGCTGGTTTGCCGCAAGCGCCTGCACTGATTTTGTATCGCCT‑CACCGGCCTCTTCGCGGGCTCGCCCGCCCCCACAGGTTCACCACGGCCCTAAGGCCATGCGATATCCCAGTGGGAGCGGGCAA < 2:903540/127‑1 TCAGCTGGTTTGCCGCAAGCGCCTGCACTGATTTTGTATCGCCT‑CACCGGCCTCTTCGCGGGCTCGCCCGCCCCCACAGGTTCACCACGGCCCTAAGGCCATGCGATATCCCAGTGGGAGCGGGCAA > 1:903540/1‑127 TGGTTTGCCGCAAGCGCCTGCACTGATTTTGTATTGCCTGCACCGGCCTCTTCGCGGGCTCGCCCGCCCCCACAGGTTCACCACGGCCCTAAGGCCATGCGATATCCCAGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGGTGAGGCGATA < 2:465457/150‑1 GTTTGCCGCAAGCGCCTGCACTGATTTTGTATTGCCTGCACCGGCCTCTTCGCGGGCTCGCCCGCCCCCACAGGTTCACCACGGCCCTAAGGCCATGCGATATCCCAGTGGGAGCGGGCAAGCCCG < 1:400406/126‑1 GTTTGCCGCAAGCGCCTGCACTGATTTTGTATTGCCTGCACCGGCCTCTTCGCGGGCTCGCCCGCCCCCACAGGTTCACCACGGCCCTAAGGCCATGCGATATCCCAGTGGGAGCGGGCAAGCCCG > 2:400406/1‑126 GTTTGCCGCAAGCGCCTGCACTGATTTTGTATCGCCT‑CACCGGC < 2:64451/44‑1 GTTTGCCGCAAGCGCCTGCACTGATTTTGTATCGCCT‑CACCGGC > 1:64451/1‑44 CCGCAAGCGCCTGCACTGATTTTGTATCGCCT‑CACCGGCCTCTTCGCGGGCTCGCCCGCCCCCACAGGTTCACCACGGCCCTAAGGCCATGCGATATCCCAGTGGGAGCGGGCAAG > 2:1310365/1‑116 CCGCAAGCGCCTGCACTGATTTTGTATCGCCT‑CACCGGCCTCTTCGCGGGCTCGCCCGCCCCCACAGGTTCACCACGGCCCTAAGGCCATGCGATATCCCAGTGGGAGCGGGCAAG < 1:1310365/116‑1 TGATTTTGTATCGCCT‑CACCGGCCTCTTCGCGGGCTCGCCCGCCCCCACAGGTTCACCACGGCCCTAAGGCCATGCGATATCCCAGTGGGAGCGG < 2:594421/95‑1 TGATTTTGTATCGCCT‑CACCGGCCTCTTCGCGGGCTCGCCCGCCCCCACAGGTTAACCACGGCCCTAAGGCCATGCGATATCCCAGTGGGAGCGG > 1:594421/1‑95 TTTTGTATCGCCT‑CACCGGCCTCTTCGCGGGCTCGCCCGCCCCCACAGGTTCACCACGGCCCTAAGGCCATGCGATATCCCAGTGGGAGCGG > 1:979909/1‑92 TTTTGTATCGCCT‑CACCGGCCTCTTCGCGGGCTCGCCCGCCCCCACAGGTTCACCACGGCCCTAAGGCCATGCGATATCCCAGTGGGAGCGG < 2:979909/92‑1 CCGGCCTCTTCGCGGGCTCGCCCGCCCCCACAGGTTCACCA < 2:1034030/41‑1 CCGGCCTCTTCGCGGGCTCGCCCGCCCCCACAGGTTCACCA > 1:1034030/1‑41 CCTCTTCGCGGGCTCGCCCGCCCCCACAGGTTCACCACGGCCCTAAGGCCATGCGATATCCCAGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGGTGAGGCGATACAAAATCAGTGCAGGCGCTTGCGGCAAACCAGCTGAGCCAGCTTGG < 2:698598/150‑1 TCTTCGCGGGCTCGCCCGCCCCCACAGGTTCACCACGGCCATAAGGCCATGCGATATCCCAGTGGGAGCGAGCCAGCCCGCGAAGAGGCCGGTGAGGCGATACAAAATCAGTGCAGGCGCTTGCGGCAAACCAGCTGAGCCAGCTTGGCA < 1:508190/150‑1 CGGGCTCGCCCGCCCCCACAGGTTCACCACGGCCCTAAGGCCATGCGATATCCCAGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGGTGAGGCGATACAAAATCAGTGCAGGCGCTTGCGGCAAACCAGCTGA > 2:1310018/1‑132 CGGGCTCGCCCGCCCCCACAGGTTCACCACGGCCCTAAGGCCATGCGATATCCCAGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGGTGAGGCGATACAAAATCAGTGCAGGCGCTTGCGGCAAACCAGCTGA < 1:1310018/132‑1 GGCTCGCCCGCCCCCACAGGTTCACCACGGCCCTAAGGACATACGTTATCCAAGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGGTGAGGCGATACAAAATCAGTGCAGGCGCTTGCGGCAAACCAGCTGAGCCAGCTTGGCAGCATCCGG < 1:643176/150‑1 GAGGTGTTCAACCCGGTGTTCGATGTAACGCCGGCCGACCTGATCGATGTGATCGTGACCGAACGCGGCATCGTCGAGCGCCCGGATGCTGCCAAGCTGGCTCAGCTGGTTTGCCGCAAGCGCCTGCACTGATTTTGTATCGCCT‑CACCGGCCTCTTCGCGGGCT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/1970618‑1970782‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑caccggcctcttcgcgggctCGCCCGCCCCCACAGGTTCACCACGGCCCTAAGGCCATGCGATATCCCAGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGGTGAGGCGATACAAAATCAGTGCAGGCGCTTGCGGCAAACCAGCTGAGCCAGCTTGGCAGCATCCGG < NC_002947/1970844‑1970699 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |