| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_002947 | 4,964,714 | C→G | R230P (CGT→CCT) | fleQ ← | transcriptional regulator FleQ |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 4,964,714 | 0 | C | G | 98.6% | 241.4 / NA | 70 | R230P (CGT→CCT) | fleQ | transcriptional regulator FleQ |
| Reads supporting (aligned to +/- strand): ref base C (0/0); major base G (39/30); minor base T (0/1); total (39/31) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.43e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
ATGCTTTGGGTCTTGTTGCTACCCACGCGCTCGAAGGTACGCTCCTGCAGCACACGCAGCAGCTTGACCTGCATCGGCAACGGCATGTCGCCGATTTCGTCGAGGAACAGGGTACCGCCGTTGGCCAGTTCGAAACGCCCGGCACGGCTGGTGATGGCCCCGGT‑AAAGGCGCCCTTCTCGTGGCCGAACAGTTCGCTTTCCAGCAGCTCGGCCGGGATCGCGCCACAGTTGACCGGCACGAACGGCGCTTCGCGGCGCTTGGAATGGTAGTGCAGGTTGCGCGCTACC > NC_002947/4964570‑4964857 | aTGCTTTGGGTCTTGTTGCTACCCACGCGCTCGAAGGTACGCTCCTGCAGCACACGCAGCAGCTTGACCTGCATCGGCAACGGCATGTCACCGATTTCGTCGAGGAAAAGGGTACCGCCGTTGGCCGGTTCGAAACGCCGGGCAGGGcgg > 1:850756/1‑148 (MQ=255) tGCTTTGGGTCTTGTTGCTACCCACGCGCTCGAAGGTACGCTCCTGCAGCACACGCAGCAGCTTGACCTGCATCGGCAACGGCATGTCGCCGATTTCGTCGAGGAACAGGGTACCGCCGTTGGCCAGTTCGAAACGCCCGGCAGGGCTgg < 2:551629/150‑1 (MQ=255) tGCTTTGGGTCTTGTTGCTACCCACGCGCTCGAAGGTACGCTCCTGCAGCACACGCAGCAGCTTGACCTGCATCGGCAACGGCATGTCGCCGATTTCGTCGAGGAACAGGGTACCGCCGTTGGCCAGTTCGAAACGCCCGGCAGGGCTgg > 1:260784/1‑150 (MQ=255) tGCTTTGGGTCTTGTTGCTACCCACGCGCTCGAAGGTACGCTCCTGCAGCACACGCAGCAGCTTGACCTGCATCGGCAACGGCATGTCGCCGATTTCGTCGAGGAACAGGGTACCGCCGTTGGCCAGTTCGAAACGCCCGGCAGGGCTgg > 1:551629/1‑150 (MQ=255) cTTTGGGTCTTGTTGCTACCCACGCGCTCGAAGGTACGGACCTGCTGATGCTGGGGCAGCTTGACCTGTATGGGTAACGGCATGTCGCCGATTTCGTCGAGGAACAGGGTACCGCCGTTGGCCAGTTCGAAACGCCCGGCAGGGCTGGTg > 1:30023/1‑150 (MQ=25) tCTTGTTGCTACCCACGCGCTCGAAGGTACGCTCCTGCAGCACACGCAGCAGCTTGACCTGCATCGGCAACGGCATGTCGCCGATTTCGTCGAGGAACAGGGTACCGCCGTTGGCCAGTTCGAAACGCCCGGCAGGGCTGGTGATGGccc < 1:150790/150‑1 (MQ=255) ttgttgCTACCCACGCGCTCGAAGGTACGCTCCTGCAGCACACGCAGCAGCTTGACCTGCATCGGCAACGGCATGTCGCCGATTTCGTCGAGGAACAGAGTAGCGCCGTTGGCCAGTTCGAAACGCCCGGCAGGGCTGGTGATGGCCCCg > 1:1532619/1‑150 (MQ=255) gttgCTACCCACGCGCTCGAAGGTACGCTCCTGCAGCACACGCAGCAGCTTGACCTGCATCGGCAACGGCATGTCGCCGATTTCGTCGAGGAACAGGGTACCGCCGTTGGCCAGTTCGAAACGCCCGGCAGGGCGGGTGATGGCCCCGGt > 1:489282/1‑150 (MQ=255) ccACGCGCTCGAAGGTACGCTCCTGCAGCACACGCAGCAGCTTGACCTGGATCGGCAACGGCATGTCGCCGATTTCGTCGAGGAACAGGGTACCGCCGTTGGCCAGTTCGAAACGCCCGGCAGGGCTGGTGATGGCCCCGGT‑AAAGgcgc < 1:440427/150‑1 (MQ=255) ccACGCGCTCGAAGGTACGCTCCTGCAGCACACGCAGCAGCTTGACCTGCATCGGCAACGGCATGTCGCCGATTTCGTCGAGGAACAGGGTACCGCCGTTGGCCAGTTCGAAACGCCCGGCATGGCTGGTGATGGCCCCGGT‑AAAGgcgc < 1:1110708/150‑1 (MQ=255) tCGAAGGTACGCTCCTGCAGCACACGCAGCAGCTTGACCTGCATCGGCAACGGCATGTCGCCGATTTCGTCGAGGAACAGGGTACCGCCGTTGGCCAGTTCGAAACGCCCGGCAGGGCTGGTGATGGCCCCGGT‑AAAGGCGCCCTTCTCg > 2:227018/1‑150 (MQ=255) aCGCTCCTGCAGCACACGCAGCAGCTTGACCTGCATCGGCAACGGCATGTCGCCGATTTCGTCGAGGAACAGGGTACCGCCGTTGGCCAGTTCGAAACGCCCGGCAGGGCTGGTGATGGCCCCGGT‑AAAGGCGCCCTTCTCGTGGCCGaa < 2:439179/150‑1 (MQ=255) gCTCCTGCAGCACACGCAGCAGCTTGACCTGCATCGGCAACGGCATGTCGCCGATTTCGTCGAGGAACAGGGTACCGCCGTTGGCCAGTTCGAAACGCCCGGCAGGGCTGGTGATGGCCCCGGT‑AAAGGCGCCCTTCTCGTGGCCGAACa > 2:229637/1‑150 (MQ=255) gCTCCTGCAGCACACGCAGCAGCTTGACCTGCATCGGCAACGGCATGTCGCCGATTTCGTCGAGGAACAGGGTACCGCCGTTGGCCAGTTCGAAACGCCCGGCAGGGCTGGTGATGGCCCCGGT‑AAAGGCGCCCTTCTCGTGGCCGAACa > 1:584839/1‑150 (MQ=255) ccTGCAGCACACGCAGCAGCTTGACCTGCATCGGCAACGGCATGTCGCCGATTTCGTCGAGGAACAGGGTACCGCCGTTGGCCAGTTCGAAACGCCCGGCAGGGCTGGTGATGGCCCCGGT‑AAAGGCGCCCTTCTCGt < 2:45160/138‑1 (MQ=255) ccTGCAGCACACGCAGCAGCTTGACCTGCATCGGCAACGGCATGTCGCCGATTTCGTCGAGGAACAGGGTACCGCCGTTGGCCAGTTCGAAACGCCCGGCAGGGCTGGTGATGGCCCCGGT‑AAAGGCGCCCTTCTCGt > 1:45160/1‑138 (MQ=255) tGCAGCACACGCAGCAGCTTGACCTGCATCGGCAACGGCATGTCGCCGATTTCGTCGAGGAACAGGGTACCGCCGTTGGCCAGTTCGAAACGCCCGGCAGGGCTGGTGATGGCCCCGGT‑AAAGGCGCCCTTCTCGTGGCCGAACAGTTCg > 2:1412234/1‑150 (MQ=255) accacaCGCAGCAGCGTGACCTGCATCGGCAACGGCATGTCGCCGATTTCGTCGAGGAACAGGGTACCCCCGTTGGCTAGTTCGAAACGCCCGTCAGGGCTGGTGATGGCCCCGGT‑AAAGGCGCCCTTCTCGTGGCCGAACAGTTCGCtt < 1:1288432/148‑1 (MQ=39) aacgctcagcagCTTTTCCTTTAACGGCAAGGGGATGTCGCCGATTTCGTCGAGGAACAGGGTACCGCCGTTGGCCAGTTCGAAACGCCCGGCAGGGCTGGTGATGGCCCTGGT‑AAAGGCGCCCTTCTCGTGGCCGAACAGTTCGCTTTc < 2:260784/144‑1 (MQ=255) acacGCAGCAGCTTGACCTGCATCGGCAACGGCATGTCGCCGATTTCGTCGAGGAACAGGGTACCGCCGTTGGCCAGTTCGAAACGCCCGGCAGGGCTGGTGATGGCCCCGGT‑AAAGGCGCCCTtc < 2:1074385/126‑1 (MQ=255) acacGCAGCAGCTTGACCTGCATCGGCAACGGCATGTCGCCGATTTCGTCGAGGAACAGGGTACCGCCGTTGGCCAGTTCGAAACGCCCGGCAGGGCTGGTGATGGCCCCGGT‑AAAGGCGCCCTtc > 1:1074385/1‑126 (MQ=255) acGCAGCAGCTTGACCTGCATCGGCAACGGCATGTCGCCGATTTCGTCGAGGAACAGGGTACCGCCGTTGGCCAGTTCGAAACGCCCGGCAGGGCTGGTGATGGCCCCGGT‑AAAGGCGCCCTTCTCGTGGCCGAACAGTTCGCTTTCcag > 1:201245/1‑150 (MQ=255) acGCAGCAGCTTGACCTGCATCGGCAACGGCATGTCGCCGATTTCGTCGAGGAACAGGGTACCGCCGTTGGCCAGTTCGAAACGCCCGGCAGGGCTGGTGATGGCCCCGGT‑AAAGGCGCCCTTCTCGTGGCCGAACAGTTCGCTTTCcag > 2:1253553/1‑150 (MQ=255) acGCAGCAGCTTGACCTGCATCGGCAACGGCATGTCGCCGATTTCGTCGAGGAACAGGGTACCGCCGTTGGCCAGTTCGAAACGCCCGGCAGGGCTGGTGATGGCCCCGGT‑AAAGGCGCCCTTCTCGTGGCCGAACAGTTCGCTTTCcag < 2:1039112/150‑1 (MQ=255) cGCAGCAGCTTGACCTGCATCGGCAACGGCATGTCGCCGATTTCGTCGAGGAACAGGGTACCGCCGTTGGCCAGTTCGAAACGCCCGGCAGGGCTGGTGATGGCCCCGGT‑AAAGGCGCCCTTCTCGTGGCCGAACAGTTCGCTTTCcagc < 1:1412234/150‑1 (MQ=255) agcagcTTGACCTGCATCGGCAACGGCATGTCGCCGATTTCGTCGAGGAACAGGGTACCGCCGTTGGCCAGTTCGAAACGCCCTGCAGGGCTGGTGATGGCCCCGGT‑AAAGGCGCCCTTCTCGTGGCCGAACAGTTCGCTTTcc < 2:974200/144‑1 (MQ=255) agcagcTTGACCTGCATCGGCAACGGCATGTCGCCGATTTCGTCGAGGAACAGGGTACCGCCGTTGGCCAGTTCGAAACGCCCGGCAGGGCTGGTGATGGCCCCGGT‑AAAGGCGCCCTTCTCGTGGCCGAACAGTTCGCTTTcc > 1:974200/1‑144 (MQ=255) agcagcTTGACCTGCATCGGCAACGGCATGTCGCCGATTTCGTCGAGGAACAGGGTACCGCCGTTGGCCAGTTCGAAACGCCCGGCAGGGCTGGTGATGGCCCCGGT‑AAAGGCGCCCTTCTCGTGGCCGAACAGTTCGCTTTCCagcagc < 1:229637/150‑1 (MQ=255) gcagcTTGACCTGCATCGGCAACGGCATGTCGCCGATTTCGTCGAGGAACAGGGTACCGCCGTTGGCCAGTTCGAAACGCCCGGCAGGGCTGGTGATGGCCCCGGT‑AAAGGCGCCCTTCTCGTGGCCGAACa > 2:729740/1‑132 (MQ=255) gcagcTTGACCTGCATCGGCAACGGCATGTCGCCGATTTCGTCGAGGAACAGGGTACCGCCGTTGGCCAGTTCGAAACGCCCGGCAGGGCTGGTGATGGCCCCGGT‑AAAGGCGCCCTTCTCGTGGCCGAACa < 1:729740/132‑1 (MQ=255) gcTTGACCTGCATCGGCAACGGCATGTCGCCGATTTCGTCGAGGAACAGGGTACCGCCGTTGGCCAGTTCGAAACGCCCGGCAGGGCTGGTGATGGCCCCGGT‑AAAGGCGCCCTTCTCGTGGCCGAACAGTTCGCTTTCCAGCAGCTCgg > 1:138689/1‑150 (MQ=255) cTGCATCGGCAACGGCATGTCGCCGATTTCGTCGAGGAACAGGGTACCGCCGTTGGCCAGTTCGAAACGCCCGGCAGGGCTGGTGATGGCCCCGGT‑AAAGGCGCCCTTCTCGTGGCCGAACAGTTCGCTTTCCAGCAGCTCGGCCGGGAt > 1:1498108/1‑150 (MQ=255) cATCGGCAACGGCATGTCGCCGATTTCGTCGAGGAACAGGGTACCGCCGTTGGCCAGTTCGAAACGCCCGGCAGGGCTGGTGATGGCCCCGGT‑AAAGGCGCCCTTCTCGTGGCCGAACAGTTCGCTTTCCAGCAGCTCGGCCGGGATcgc < 1:227018/150‑1 (MQ=255) tCGGCAACGGCATGTCGCCGATTTCGTCGAGGAACAGGGTACCGCCGTTGGCCAGTTCGAAACCCCCGGCAGGGCTGGTGATGGCCCCGGT‑AAAGGCGCCCTTCTCGTGGCCGAACAGTTCGCTTTCCAGCAGCTCGGCCGGGCTCgcgc > 1:163003/1‑150 (MQ=255) cGGCAACGGCATGTCGCCGATTTCGTCGAGGAACAGGGTACCGCCGTTGGCCAGTTCGAAACGCCCGGCAGGGCTGGTGATGGCCCCGGT‑AAAGGCGCCCTtctc > 1:289453/1‑105 (MQ=255) cGGCAACGGCATGTCGCCGATTTCGTCGAGGAACAGGGTACCGCCGTTGGCCAGTTCGAAACGCCCGGCAGGGCTGGTGATGGCCCCGGT‑AAAGGCGCCCTtctc < 2:289453/105‑1 (MQ=255) aTTTCGTCGAGGAACAGGGTACCGCCGTTGGCCAGTTCGAAACGCCCGGCAGGGCTGGTGATGGCCCCGGT‑AAAGGCGCCCTTCTCGTGGCCGAACAGTTCGCTTTCCAGCAGCTCGGCCGGGATCGCGCCACAGTTGACCGGCACTAAc < 2:1498108/150‑1 (MQ=255) gtcgAGGAACAGGGTACCGCCGTTGGCCAGTTCGAAACGCCCGGCAGGGCTGGTGATGGCCCCGGT‑AAAGGCGCCCTTCTCGTGGCCGAACAGTTCGCTTTCCAGCAGCTCGGCCGGGATCGCGCCACAGTTGACCGGCACGAACGgcgc < 2:584839/150‑1 (MQ=255) gtcgAGGAACAGGGTACCGCCGTTGGCCAGTTCGAAACGCCCGGCAGGGCTGGTGATGGCCCCGGT‑AAAGGCGCCCTTCTCGTGGCCGAACAGTTCGCTTTCCAGCAGCTCGGCCGGGATCGCGCCACAGTTGACCGGCACGAACGgcgc > 2:1205330/1‑150 (MQ=255) gAGGAACAGGGTACCGCCGTTGGCCAGTTCGAAACGCCCGGCAGGGCTGGTGATGGCCCCGGT‑AAAGGCGCCCTTCTCGTGGCCGAACAGTTCGCTTTCCAGCAGCTCGGCCGGGATCGCGCCACAGTTGACCGGCACGAACGGCGCTTc > 2:1548840/1‑150 (MQ=255) aaCAGGGTACCGCCGTTGGCCAGTTCGAAACGCCCGGCAGGGCTGGTGATGGCCCCGGT‑AAAGGCGCCCTTCTCGTGGCCGAACAGTTCGCTTTCcagca < 1:1480526/100‑1 (MQ=255) aaCAGGGTACCGCCGTTGGCCAGTTCGAAACGCCCGGCAGGGCTGGTGATGGCCCCGGT‑AAAGGCGCCCTTCTCGTGGCCGAACAGTTCGCTTTCcagca > 2:1480526/1‑100 (MQ=255) aGGGTACCGCCGTTGGCCAGTTCGAAACGCCCGGCAGGGCTGGTGATGGCCCCGGT‑AAAGGCGCCCTTCTCGTGGCCGAACAGTTCGCTTTCCAGCAGCTCGGCCGGGATCGCGCCACAGTTGACCGGCACGAACGGCGCTTCGCGgagc > 2:1467016/1‑150 (MQ=255) ggTACCGCCGTTGGCCAGTTCGAAACGCCCGGCAGGGCTGGTGATGGCCCCGGT‑AAAGGCGCCCTTCTCGTGGCCGAACAGTTCGCTTTCCAGCAGCTCGGCCGGGATCGCGCCACAGTTGACCGGCACGaa > 1:882770/1‑132 (MQ=255) ggTACCGCCGTTGGCCAGTTCGAAACGCCCGGCAGGGCTGGTGATGGCCCCGGT‑AAAGGCGCCCTTCTCGTGGCCGAACAGTTCGCTTTCCAGCAGCTCGGCCGGGATCGCGCCACAGTTGACCGGCACGaa < 2:882770/132‑1 (MQ=255) ggTACCGCCGTTGGCCAGTTCGAAACGCCCGGCAGGGCTGGTGATGGCCCCGGT‑AAAGGCGCCCTTCTCGTGGCCGAACAGTTCGCTTTCCAGCAGCTCGGCCGGGATCGCGCCACAGTTGACCGGCACGAACGGCGCTTCGCGGCGCtt < 1:1205330/150‑1 (MQ=255) cgccgTTGGCCAGTTCGAAACGCCCGGCAGGGCTGGTGATGGCCCCGGT‑AAAGGCGCCCTTCTCGTGGCCGAACAGTTCGCTTTCCAGCAGCTCGGCCGGGATCGCGCCACAGTTGACCGGCACGAACGGCGCTTCGCGGCGCTTGGAAt < 1:1548840/150‑1 (MQ=255) cgccgTTGGCCAGTTCGAAACGCCCGGCAGGGCTGGTGATGGCCCCGGT‑AAAGGCGCCCTTCTCGTGGCCGAAAAGTTCGCTTTCCAGCAGCTCGGCCGGGATCGCGCCACAGTTGACCGGCACGAACGGCGCTTCGCGGCGCTTGGAAt > 1:1002439/1‑150 (MQ=255) ccgTTGGCCCGTTCGAAACGCCCGGCAGGGCTGGTGATGGCCCCGGT‑AAAGGCGCCCTTCTCGTGGCCGAACAGTTCGCTTTCCAGCAGCTCGGCCGGGATCGCGCCACAGTTGACCGGCACGAACGGCGCTTCGCGGCGCTTGGAATgg < 2:281639/150‑1 (MQ=255) ttGGCCAGTTCGAAACGCCCGGCAGGGCTGGTGATGGCCCCGGT‑AAAGGCGCCCTTCTCGTGGCCGAACAGTTCGCTTTCCAGCAGCTCGGCCGGGATCGCGCCACAGTTGACCGGCACGAACGGCGCTTCGCGGCGCTTGGAATGGTAg > 1:1298295/1‑150 (MQ=255) ttGGCCAGTTCGAAACGCCCGGCAGGGCTGGTGATGGCCCCGGT‑AAAGGCGCCCTTCTCGTGGCCGAACAGTTCGCTTTCCAGCAGCTCGGCCGGGATCGCGCCACAGTTGACCGGCACGAACGGCGCTTCGCGGCGCTTGGAATGGTAg < 2:489282/150‑1 (MQ=255) ccAGTTCGAAACGCCCGGCAGGGCTGGTGATGGCCCCGGT‑AAAGGCGCCCTTCTCGTGGCCGAACAGTTCGCTTTCCAGCAGCTCGGCCGGGATCGCGCCACAGTTGACCGGCACGAACGGCGCTTCGCGGCGCTTGGAATGGTAGTGCa < 1:1253553/150‑1 (MQ=255) cAGTTCGAAACGCCCGGCAGGGCTGGTGATGGCCCCGGT‑AAAGGCGCCCTTCTCGTGGCCGAACAGTTCGCTTTCCAGCAGCTCGGCCGGGATCGCGCCACAGTTGACCGGCACGAACGGCGCTTCGCGGCGCTTGGAATGGTAGTGCAg > 1:588784/1‑150 (MQ=255) aGTTCGAAACGCCCGGCAGGGCTGGTGATGGCCCCGGT‑AAAGGCGCCCTTCTCGTGGCCGAACAGTTCGCTTTCCAGCAGCTCGGCCGGGATCGCGCCACAGTTGACCGGCACGAACGGCGCTTCGCGGCGCTTGGAATGGTAGTGCAgg > 1:527430/1‑150 (MQ=255) aGTTCGAAACGCCCGGCAGGGCTGGTGATGGCCCCGGT‑AAAGGCGCCCTTCTCGTGGCCGAACAGTTCGCTTTCCAGCAGCTCGGCCGGGATCGCGCCACAGTTGACCGGCACGAACGGCGCTTCGCGGCGCTTGGAATGGTAGTGCAgg > 2:784070/1‑150 (MQ=255) gTTCGAAACGCCCGGCAGGGCTGGTGATGGCCCCGGT‑AAAGGCGCCCTTCTCGTGGCCGAACAGTTCGCTTTCCAGCAAATCGGCCGGGATCGCGCCACAGTTGACCGGCACGAACGGCGCTTCGCGGCGCTTGTAATGTGAGTGCAGGt > 1:1139914/1‑150 (MQ=255) ttCGAAACGCCCGGCAGGGCTGGTGATGGCCCCGGTAAAAGGCGCCCTTCTCGTGGc > 2:1118197/1‑57 (MQ=38) ttCGAAACGCCCGGCAGGGCTGGTGATGGCCCCGGTAAAAGGCGCCCTTCTCGTGGc < 1:1118197/57‑1 (MQ=38) gAAACGCCCGGCAGGGCTGGTGATGGCCCCGGT‑AAAGGCGCCCTTCTCGTGGCCGAACAGTTCGCTTTCCAGCAGCTCGGCCGGGATCGCGCCACAGTTGACCGGCACGAACGGCGCTTCGCGGCGCTTGGAATGGTAGTGCAGGTTgcg > 2:1274968/1‑150 (MQ=255) aaaCGCCCGGCAGGGCTGGTGATGGCCCCGGT‑AAAGGCGCCCTTCTCGTGGCCGAACAGTTCGCTTTCCAGCAGCTCGGCCGGGATCGCGCCACAGTTGACCGGCACGAACGGCGCTTCGCGGCGCTTGGAATGGTAGTGCAGGTTgcgg > 2:1395163/1‑149 (MQ=255) aaaCGCCCGGCAGGGCTGGTGATGGCCCCGGT‑AAAGGCGCCCTTCTCGTGGCCGAACAGTTCGCTTTCCAGCAGCTCGGCCGGGATCGCGCCACAGTTGACCGGCACGAACGGCGCTTCGCGGCGCTTGGAATGGTAGTGCAGGTTgcgc < 2:527430/150‑1 (MQ=255) aaaCGCCCGGCAGGGCTGGTGATGGCCCCGGT‑AAAGGCGCCCTTCTCGTGGCCGAACAGTTCGCTTTCCAGCAGCTCGGCCGGGATCGCGCCACAGTTGACCGGCACGAACGGCGCTTCGCGGCGCTTGAAATGGTAGTGCAGGTTgcgc > 2:1394403/1‑150 (MQ=255) aaaCGCCCGGCAGGGCTGGTGATGGCCCCGGT‑AAAGGCGCCCTTCTCGTGGCCGAACAGTTCGCTTTCCAGCAGCTCGGCCGGGATCCCGCCACACAGTACCTTCACGAACGGCGCTTCGCGGCGCTTGGAATGGTAGTGCAGGTTgcgc < 2:1329592/150‑1 (MQ=255) aaaCGCCCGGCAGGGCTGGTGATGCCACCGGTCACAGGC‑TCGGCCTCGTAAGTGGACAGTTCGCTTTCCCGCAGCGCGGCCGGGATCGCGCCACAGTTGACCGGCACGAACGGCGCTTCGCGGCGCTTGGAATGGTAGTGCAGGTTgcgc < 1:355104/150‑1 (MQ=255) aaCGCCCGGCAGGGCTGGTGATGGCCCCGGT‑AAAGGCGCCCTTCTCGTGGCCGAACAGTTCGCTTTCCAGCAGCTCGGCCGGGATcgc > 2:49257/1‑88 (MQ=255) aaCGCCCGGCAGGGCTGGTGATGGCCCCGGT‑AAAGGCGCCCTTCTCGTGGCCGAACAGTTCGCTTTCCAGCAGCTCGGCCGGGATcgc < 1:49257/88‑1 (MQ=255) ccGGCAGGGCTGGTGATGGCCCCGGT‑AAAGGCGCCCTTCTCGTGGCCGAACAGTTCGCTTTCCAGCAGCTCGGCCGGGATCGCGCCACAGTTGACCGGCACGAACGGCGCTTCGCGGCGCTTGGAATGGTAGTGCAGGTTGCGCGCTa > 1:1190976/1‑148 (MQ=255) ccGGCAGGGCTGGTGATGGCCCCGGT‑AAAGGCGCCCTTCTCGTGGCCGAACAGTTCGCTTTCCAGCAGCTCGGCCGGGATCGCGCCACAGTTGACCGGCACGAACGGCGCTTCGCGGCGCTTGGAATGGTAGTGCAGGTTGCGCGCTa < 2:1190976/148‑1 (MQ=255) ccGGCAGGGCTGGTGATGGCCCCGGT‑AAAGGCGCCCTTCTCGTGGCCGAACAGTTCGCTTTCCAGCAGCTCGGCCGGGATCGCGCCACAGTTGACCGGCACGAACGGCGCTTCGCGGCGCTTGGAATGGTAGTGCAGGTTGCGCGCTAcc > 1:788111/1‑150 (MQ=255) ccGGCAGGGCTGGTGATGGCCCCGGT‑AAAGGCGCCCTTCACGTGGCCGAACAGTTCGCTTTCCAGCAGCTCGGCCGGGATCGCGCCACAGTTGACCGGCACGAACGGCGCTTCGCGGCGCTTGGAATGGTAGTGCAGGTTGCGCGCTAcc > 2:690104/1‑150 (MQ=255) | ATGCTTTGGGTCTTGTTGCTACCCACGCGCTCGAAGGTACGCTCCTGCAGCACACGCAGCAGCTTGACCTGCATCGGCAACGGCATGTCGCCGATTTCGTCGAGGAACAGGGTACCGCCGTTGGCCAGTTCGAAACGCCCGGCACGGCTGGTGATGGCCCCGGT‑AAAGGCGCCCTTCTCGTGGCCGAACAGTTCGCTTTCCAGCAGCTCGGCCGGGATCGCGCCACAGTTGACCGGCACGAACGGCGCTTCGCGGCGCTTGGAATGGTAGTGCAGGTTGCGCGCTACC > NC_002947/4964570‑4964857 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |