| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 1499443 = | 34 (0.950) | 9 (0.300) | 8/226 | 2.4 | 23.9% | intergenic (+13/‑153) | trpS/zapE | tryptophan‑‑tRNA ligase/nucleoside triphosphate hydrolase domain‑containing protein |
| ? | NC_002947 | 1499526 = | 29 (0.970) | intergenic (+96/‑70) | trpS/zapE | tryptophan‑‑tRNA ligase/nucleoside triphosphate hydrolase domain‑containing protein | |||||
TCCGCATCGAAGGCCTGAGCTTCGGCCTGTGGCTCAATGGCGAGCAGGTTGCCGACGGGCCGCAGTTCGACAACGCTGAAGCCCGTGATGCGGCCATTCAGAGCCTGAACGAAGCCTTGGCACCACAGCAGGACTGAGGCTGCCAAACGGTGGGAGCGGGCGTGCCCGCGAAA‑CAGGCGCCGCGGTGCATGGCACCGGCTTTGCCGGTGTTCGCGGGCACGCCCGCTCCCACAGACTGATTGCCATTAAGCGGGCCTATCGCTACAGTGACGGCCCGTTTTTTGTTGCCTCGCTAAC > NC_002947/1499294‑1499590 | gcaccgcagtttcctgcgccgcgtcatggaagaagtcgggacgtttcagatctgcttgatagcgttctaagggagtcatgattcgttagcgaggcaacaaaaaacgggccgtcactgtagcgataggcccgcttaatggcaatcagtctg < 2:818802‑M1/1‑1 (MQ=255) ccGCATCGAAGGCCTGAGCTTCGGCCTGTGGCTCAATGGCGAGCAGGTTGCCGACGGGCCGCAGTTCGACAACGCTGAAGCCCGTGATGCGGCCATTCAGAGCCTGAACGAAGCCTTGGCACCACAGCAGGACTGAGGCTGCCAAACGGt < 1:86680/150‑1 (MQ=255) cGCATCGAAGGCCTGAGCTTCGGCCTGTGGCTCAATGGCGAGCAGGTTGCCGACGGGCCGCAGTTCGACAACGCTGAAGCCCGTGATGCGGCCATTCAGAGCCTGAACGAAGCCTTGGCCCCACAGCAGGACTGAGGCTGCCAAACGGTg > 1:222026/1‑150 (MQ=255) cGCATCGAAGGCCTGAGCTTCGGCCTGTGGCTCAATGGCGAGCAGGTTGCCGACGGGCCGCAGTTCGACAACGCTGAAGCCCGTGATGCGGCCATTCAGAGCCTGAACGAAGCCTTGGCACCACAGCAGGACTGAGGCTGCCAAACGGTg > 2:715404/1‑150 (MQ=255) gcgccgcgtcatggaagaagtcgggacgtttcagatctgcttgatagcgttctaagggagtcatgattcgttagcgaggcaacaaaaaacgggccgtcactgtagcgataggcccgcttaatggcaatcagtctGTGGGAGCGGGCGTGc < 1:689918‑M1/16‑1 (MQ=255) gccgcgtcatggaagaagtcgggacgtttcagatctgcttgatagcgttctaatggagtcatgattcgttagcgaggcaacaaaaaacgggccgtcactgtagcgataggcccgcttaatggcaatcagtctGTgg > 2:631794‑M1/133‑136 (MQ=255) gccgcgtcatggaagaagtcgggacgtttcagatctgcttgatagcgttctaatggagtcatgattcgttagcgaggcaacaaaaaacgggccgtcactgtagcgataggcccgcttaatggcaatcagtctGTgg < 1:631794‑M1/4‑1 (MQ=255) gccgcgtcatggaagaagtcgggacgtttcagatctgcttgatagcgttctaagggagtcatgattcgttagcgaggcaacaaaaaacgggccgtcactgtagcgataggcccgcttaatggcaatcagtctGTGGGAGCGGGCGTGccc > 2:501240‑M1/133‑150 (MQ=255) ttCGGCCTGTGGCTCAATGGCGAGCAGGTTGCCGACGGGCCGCAGTTCGACAACGCTGAAGCCCGTGATGCGGCCATTCAGAGCCTGAACGAAGCCTTGGCACCACAGCAGGACTGAGGCTGCCAAACGGTGGGAGCGGGCGTGCCcgcg > 1:331066/1‑150 (MQ=255) gcgtcatggaagaagtcgggacgtttcagatctgcttgatagcgttctaagggagtcatgattcgttagcgaggcaacaaaaaacgggccgtcactgtagcgataggcccgcttaatggcaatcagtctGTGGGAGCGGGCGGGCCcgcg < 2:335021‑M1/21‑1 (MQ=255) cgtcatggaagaagtcgggacgtttcagatctgcttgatagcgttctaagggagtcatgattcgttagcgaggcaacaaaaaacgggccgtcactgtagcgataggcccgcttaatggcaatcagtctGTGGGAGCGGGCACGcccgctc > 1:818802‑M1/129‑148 (MQ=255) tgtgGCTCAATGGCGAGCAGGTTGCCGACGGGCCGCAGTTCGACAACGCTGAAGCCCGTGATGCGGCCATTCAGAGCCTGAACGAAGCCTTGGCACCACAGCAGGACTGAGGCTGCCAAACGGTGGGAGCGGGCGTGCCCGCGAAA‑CAgg < 2:222026/150‑1 (MQ=255) cGAGCAGGTTGCCGACGGGCCGCAGTTCGACAACGCTGAAGAACGAAAACAAACGCTTCAAGGAATGATAAATATTTCGGTACCACTGCGATTCTTAGTCGTCTAAAGGGTGGGAGCGTGCGTGCCCGCGAAA‑CAGGCGCCGCGGTGCAt < 2:754961/150‑1 (MQ=255) aGCAGGTTGCCGACGGGCCGCAGTTCGACAACGCTGAAGCCCGTGATGCGGCCATTCAGAGCCTGAACGAAGCCTTGGCACCACAGCAGGACTGAGGCTGCCAAACGGTGGGAGCGGGCGTGCCCGCGAAA‑CAGGCGCCGCGGTGCATgg > 1:646347/1‑150 (MQ=255) tttcagatctgcttgatagcgttctaagggagtcatgattcgttagcgaggcaacaaaaaacgggccgtcactgtagcgataggcccgcttaatggcaatcagtctGTGGGAGCGGGCGTGCCCGCGAAAACAGGCGCCGCGGTGCATgg < 2:775796‑M1/44‑1 (MQ=255) atctgcttgatagcgttctaagggagtcatgattcgttagcgaggcaacaaaaaacgggccgtcactgtagcgataggcccgcttaatggcaatcagtctGTGGGAGCGGGc > 1:640108‑M1/101‑112 (MQ=255) atctgcttgatagcgttctaagggagtcatgattcgttagcgaggcaacaaaaaacgggccgtcactgtagcgataggcccgcttaatggcaatcagtctGTGGGAGCGGGc < 2:640108‑M1/12‑1 (MQ=255) tctgcttgatagcgttctaagggagtcatgattcgttagcgaggcaacaaaaaacgggccgtcactgtagcgataggcccgcttaatggcaatcagtctGTGGGAGCGGGCGTGCCCGCGAAA‑CAGGCGCCGCGGTGCATGGCACCGGCt < 1:591571‑M1/51‑1 (MQ=255) gggCCGCAGTTCGACAACGCTGAAGCCCGTGATGCGGCCATTCAGAGCCTGAACGAAGCCTTGGCACCACAGCAGGACTGAGGCTGCCAAACGGTGGGAGCGGGCGTGCCCGCGAAA‑CAGGCGCCGCGGTGCATGGCACCGGCTTTGCCg < 2:767183/150‑1 (MQ=255) cGCAGTTCGACAACGCTGAAGCCCGTGATGCGGCCATTCAGAGCCTGAACGAAGCCTTGGCACCACAGCAGGACTGAGGCTGCCAAACGGTGGGAGCGGGCGTGCCCGCGAAA‑CAGGCGCCGCGGTGCATGGCACCGGCTTTGCCGgtgt > 2:447571/1‑150 (MQ=255) gCAGTTCGACAACGCTGAAGCCCGTGATGCGGCCATTCAGAGCCTGAACGAAGCCTTGGCACCACAGCAGGACTGAGGCTGCCAAACGGTGGGAGCGGGCGTGCCCGCGAAA‑CAGGCGCCGCGGTGCATGGCACCGGCTTTGCCGGTGtt > 1:722347/1‑150 (MQ=255) ttctaagggagtcatgattcgttagcgaggcaacaaaaaacgggccgtcactgtagcgataggcccgcttaatggcaatcagtctGTGGGAGCGGGCGTGCCCGCGAAA‑CAGGCGCCGCGGTGCATGGCACCGGCTTTGCCGGTGTTcgc > 2:689918‑M1/86‑150 (MQ=255) ttCGACAACGCTGAAGCCCGTGATGCGGCCATTCAGAGCCTGAACGAAGCCTTGGCACCACAGCAGGACTGAGGCTGCCAAACGGTGGGAGCGGGCGTGCCCGCGAAA‑CAGGCGCCGCGGTGCATGGCACCGGCTTTGCCGGTGTTcgcg < 2:722347/150‑1 (MQ=255) ctaagggagtcatgattcgttagcgaggcaacaaaaaacgggccgtcactgtagcgataggcccgcttaatggcaatcagtctGTGGGAGCGGGCGTGCCCGCGAAA‑CAGGCGCCGCGGTGCATGGCACCGGCTTTGCCGGTGTTCGCgg > 2:591571‑M1/84‑150 (MQ=255) taagggagtcatgattcgttagcgaggcaacaaaaaacgggccgtcactgtagcgataggcccgcttaatggcaatcagtctGTGGGAGCGGGCGTGCCCGCGAAAACAGGCGCCGCGGTGCATGGCACCGGCTTTGCCGGTGTTCGCgg > 1:775796‑M1/83‑150 (MQ=255) gACAACGCTGAAGCCCGTGATGCGGCCATTCAGAGCCTGAACGAAGCCTTGGCACCACAGCAGGACTGAGGCTGCCAAACGGTGGGAGCGGGCGTGCCCGCGAAA‑CAGGCGCCGCGGGGCATGGCACCGGCTTAGCCGGGGGTCGCGGGc > 1:159002/1‑150 (MQ=255) cAACGCTGAAGCCCGTGATGCGGCCATTCAGAGCCTGAACGAAGCCTTGGCACCACAGCAGGACTGAGGCTGCCAAACGGTGGGAGCGGGCGTGCCCGCGAAA‑CAGGCGCCGCGGTGCATGGCACCGGCTTTGCCGGTGTTCGCGGGCAc < 1:622876/150‑1 (MQ=255) cTGAAGCCCGTGATGCGGCCATTCAGAGCCTGAACGAAGCCTTGGCACCACAGCAGGACTGAGGCTGCCAAACGGTGGGAGCGGGCGTGcc > 2:472505/1‑91 (MQ=255) cTGAAGCCCGTGATGCGGCCATTCAGAGCCTGAACGAAGCCTTGGCACCACAGCAGGACTGAGGCTGCCAAACGGTGGGAGCGGGCGTGcc < 1:472505/91‑1 (MQ=255) tGAAGCCCGTGATGCGGCCATTCAGAGCCTGAACGAAGCCTTGGCACCACAGCAGGACTGAGGCTGCCAAACGGt > 2:588858/1‑75 (MQ=255) tGAAGCCCGTGATGCGGCCATTCAGAGCCTGAACGAAGCCTTGGCACCACAGCAGGACTGAGGCTGCCAAACGGt < 1:588858/75‑1 (MQ=255) attcgttagcgaggcaacaaaaaacgggccgtcactgtagcgataggcccgcttaatggcaatcagtctGTGGGAGCGGGCGTGCCCGCGAAA‑CAGGCGCCGCGGTGCATGGCACCGGCTTTGCCGGTGTTCGCGGGCACGcc < 1:739797‑M1/74‑1 (MQ=255) attcgttagcgaggcaacaaaaaacgggccgtcactgtagcgataggcccgcttaatggcaatcagtctGTGGGAGCGGGCGTGCCCGCGAAA‑CAGGCGCCGCGGTGCATGGCACCGGCTTTGCCGGTGTTCGCGGGCACGcc > 2:739797‑M1/70‑143 (MQ=255) cccGTGATGCGGCCATTCAGAGCCTGAACGAAGCCTTGGCACCACAGCAGGACTGAGGCTGCCAAACGGTGGGAGCGGGCGTGCCCGCGAAA‑CAGGCGCCGCGGTGCATGGCACCGGCTTTGCCGGTGTTCGCGGGCACGCCCGCTCCca < 1:447571/150‑1 (MQ=255) ggCCATTCAGAGCCTGAACGAAGCCTTGGCACCACAGCAGGACTGAGGCTGCCAAACGGTGGGAGCGGGCGTGCCCGCGAAA‑CAGGCGCCGCGGTGCATGGCACCGGCTTTGCCGGTGTTCGCggg > 2:356011/1‑126 (MQ=255) ggCCATTCAGAGCCTGAACGAAGCCTTGGCACCACAGCAGGACTGAGGCTGCCAAACGGTGGGAGCGGGCGTGCCCGCGAAA‑CAGGCGCCGCGGTGCATGGCACCGGCTTTGCCGGTGTTCGCggg < 1:356011/126‑1 (MQ=255) aTTCAGAGCCTGAACGAAGCCTTGGCACCACAGCAGGACTGAGGCTGCCAAACGGTGGGAGCGGGCGTGCCCGCGAAA‑CAGGCGCCGCGGTGCATGGCACCGGCTTTGCCGGTGTTCGCGGGCACGCCCGCTCCCACAGACTGATTGCCa < 1:715404/150‑1 (MQ=255) aTTCAGAGCCTGAACGAAGCCTTGGCACCACAGCAGGACTGAGGCTGCCAAACGGTGGGAGCGGGCGTGCCCGCGAAA‑CAGGCGCCGCGGTGCATGGCACCGGCTTTGCCAAGGTTCGCGGGCACGCCCGCTCCCACAGACTGATTGCCa > 1:229598/1‑150 (MQ=255) ttCAGAGCCTGAACGAAGCCTTGGCACCACAGCAGGACTGAGGCTGCCAAACGGCGGGAGCGGGCGTGCCCGCGAAA‑CAGGCGCCGCGGTGCATGGCACCGGCTTTGCCGGTGTTCGCGGGCACGCCCGCTCCCACAGACTGATTGCCAt > 1:350684/1‑150 (MQ=255) gCCTGAACGAAGCCTTGGCACCACAGCAGGACTGAGGCTGCCAAACGGTGGGAGCGGGCGTGCCCGCGAAA‑CAGGCGCCGCGGTGCATGGCACCGGCTTTGCCGGTGTTCGCGGGCACGCCCGCTCCCACAGACTGATTGCCATTAAGCg < 2:454676/150‑1 (MQ=255) ccTGAACGAAGCCTTGGCACCACAGCAGGACTGAGGCTGCCAAACGGTGGGAGCGGGCGTGCCCGCGAAA‑CAGGCGCCGCGGTGCATGGCACCGGCTTTGCCGGTGTTCGCGGGCACGCCCGCTCCCACAGACTGATTGCCATTAAGCgg > 1:250652/1‑150 (MQ=255) ccTGAACGAAGCCTTGGCACCACAGCAGGACTGAGGCTGCCAAACGGTGGGAGCGGGCGTGCCCGCGAAA‑CAGGACGCGCGGTGCATGGCACCGGCTTTGCCGGTGTTCGCGGGCACGCCCGCTCCCACAGACTGATTGCCATTAAGCgg > 1:494429/1‑150 (MQ=255) tGAACGAAGCCTTGGCACCACAGCAGGACTGAGGCTGCCAAACGGTGGGAGCGGGCGTGCCCGCGAAA‑CAGGCGCCGCGGTGCATGGCACCGGCTTTGCCGGTGTTCGCGGGCACGCCCGCTCCCACAGACTGATTGCCATTAAGCGGGc > 2:325146/1‑150 (MQ=255) tGAACGAAGCCTTGGCACCACAGCAGGACTGAGGCTGCCAAACGGTGGGAGCGGGCGTGCCCGCGAAA‑CAGGCGCCGCGGTGCATGGCACCGGCTTTGCCGGTGTTCGCGGGCACGCCCGCTCCCACAGACTGATTGCCATTAAGCGGGc < 1:556559/150‑1 (MQ=255) gAACGAAGCCTTGGCACCACAGCAGGACTGAGGCTGCCAAACGGTGGGCGCGGGCGTGCCCGCGAAA‑CAGGCGCCGCGGTGCATGGCACCGGCTTTGCCGGTGTTCGCGGGAACGACCGCTCCCACAGCCTGATTGCCCTTAAGCGGGcc > 2:835464/1‑150 (MQ=37) gAACGAAGCCTTGGCACCACAGCAGGACTGAGGCTGCCAAACGGTGGGAGCGGGCGTGCCCGCGAAA‑CAGGCGCCGCGGTGCATGGCACGGGCTCTGCCGGCCTTCGCGGGCAAGCCCGCTCCCACAGACTGATTGCCATTAAGCGGGcg > 2:22937/1‑149 (MQ=37) cGAAGCCTTGGCACCACAGCAGGACTGAGGCTGCCAAACGGTGGGAGCGGGCGTGCCCGCGAAA‑CAGGCGCCGCGGTGCATGGCACCGGCTTTGCCGGTGTTCGCGGGCACGCCCGCTCGCACAGACTGATTGCCATTAAGCGGGCCTAt < 2:331066/150‑1 (MQ=255) gcaatcagtcgGTGGGAGCGGGCGTGCCCGCGAAA‑CAGGCGCCGCGGTGCATGGCACCGGCTTTGCCGGTGtt > 2:463145‑M1/12‑73 (MQ=255) gcaatcagtcgGTGGGAGCGGGCGTGCCCGCGAAA‑CAGGCGCCGCGGTGCATGGCACCGGCTTTGCCGGTGtt < 1:463145‑M1/62‑1 (MQ=255) cAAACGGTGGGAGCGGGCGTGCCCGCGAAA‑CAGGCGCCGCGGTGCATGGCACCGGCTTTGCCGGTGTTCGCGGGCACGCCCGCTCCCACAGACTGATTGCCATTAAGCGGGCCTATCGCTACAGTGACGGCCCGTTTTTTGTTGCTTCGc > 1:333943/1‑150 (MQ=255) aaaCGGTGGGAGCGGGCGTGCCCGCGAAA‑CAGGCGCCGCGGTGCATGGCACCGGCTTTGCCGGTGTTCGCGGTCACGCCCGCTCCCACAGACTGATTGCCATTAAGCGGGCCTATCGCTACAGTGACGGCCCGTTTTTTGTTGCCTCGCt > 1:335021/1‑150 (MQ=255) cGGTGGGAGCGGGCGTGCCCGCGAAA‑CAGGCGCCGCGGTGCATGGCACCGGCTTTGCCGGTGTTCGCGGGCACGCCCGCTCCCACAGACTGATTGCCATTAAGCGGGCCTATCGCTACAGTGACGGCCCGTTTTTTGTTGCCTCGCTAAc < 1:325146/150‑1 (MQ=255) | TCCGCATCGAAGGCCTGAGCTTCGGCCTGTGGCTCAATGGCGAGCAGGTTGCCGACGGGCCGCAGTTCGACAACGCTGAAGCCCGTGATGCGGCCATTCAGAGCCTGAACGAAGCCTTGGCACCACAGCAGGACTGAGGCTGCCAAACGGTGGGAGCGGGCGTGCCCGCGAAA‑CAGGCGCCGCGGTGCATGGCACCGGCTTTGCCGGTGTTCGCGGGCACGCCCGCTCCCACAGACTGATTGCCATTAAGCGGGCCTATCGCTACAGTGACGGCCCGTTTTTTGTTGCCTCGCTAAC > NC_002947/1499294‑1499590 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |