| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 1731205 = | 27 (0.750) | 8 (0.280) | 6/216 | 2.8 | 28.9% | intergenic (‑76/+115) | dapE/PP_1526 | succinyl‑diaminopimelate desuccinylase/beta‑(1‑3)‑glucosyl transferase |
| ? | NC_002947 | 1731297 = | 18 (0.630) | intergenic (‑168/+23) | dapE/PP_1526 | succinyl‑diaminopimelate desuccinylase/beta‑(1‑3)‑glucosyl transferase | |||||
GCGACGGATCAGGTCGCAGGCCAGTTGAAGGGTAGGCGAGAGCT‑CGGCAGGGGCCGTCATGGGGGACTCCGGGGCAAGGCAAGGCGGGGAAATCTGAGGGGCGTTATCTTATATCAAATGGTTTCGGGCAGCACGGCCCATTCGCGGGCACGCCCGCTCCCACAGGTACTGCACAGCTCTGAACGCCTGTGCCAAGCCGGTGGGAGCGGGCGTGCCCGCGAATGGGCTGCACAGGTCGGCCCAGGCAACTTCAAGCCTGCTGCGCTTGGGCAGCCTT > NC_002947/1731070‑1731346 | gCGACGGATCAGGTCGCAGGCCAGTTGAAGGGTAGGCGAGAGCT‑CGGCAGGGGCCGTCATGGGGGACTCCGGGGCAAGGCAAGGCGGGGAAATCTGAGGGGCGTTATCTTATATCAAATGGTTTCGGGCAGCACGGCCCATTc < 2:91912/143‑1 (MQ=255)gCGACGGATCAGGTCGCAGGCCAGTTGAAGGGTAGGCGAGAGCT‑CGGCAGGGGCCGTCATGGGGGACTCCGGGGCAAGGCAAGGCGGGGAAATCTGAGGGGCGTTATCTTATATCAAATGGTTTCGGGCAGCACGGCCCATTc > 1:91912/1‑143 (MQ=255) tCAGGTCGCAGGCCAGTTGAAGGGTAGCCGAGAGCTGCCGCAGGGCCGTTCAT‑CGTCAGTCCGGGGCAAGTCTAGTCGGGGAAATCTGAGGGGCGTTATCTTATATCAAATGGTTTCAGGCAGCACGGCCCATTCGCGGGCACGCCCGCt > 1:152469/1‑150 (MQ=255) gctggtgcagtcgttgccttatgtggcagcgctggtgatggcgttcctgtcgtcgctgcccaagcccgcagaaaaggctgcccaagcgcagcaggcttgaagttgcctgggccgacctgtgcaGCCCATTCGCGGGCACGCCCGCTCCca > 1:759626‑M1/124‑150 (MQ=255) ctggtgcagtcgttgccttatgtggcagcgctggtgatggcgttcctgtcgtcgctgcccaagcccgcagaaaaggctgcccaagcgcagcaggcttgaagttgcctgggccgacctgtgcaGCCCATTCGCGGGCACGCCCGCTCCcac > 2:193311‑M1/123‑150 (MQ=255) ggCCAGTTGAAGGGTAGGCGAGAGCT‑CGGCAGGGGCCGTCATGGGGGACTCCGGGGCAAGGCAAGGCGGGGAAATCTGAGGGGCGTTATCTTATATCAAATGGTTTCGGGCAGCACGGCCCATTCGCGGGCACGCCCGCTCCCACAGGTa < 2:576805/150‑1 (MQ=255) gTTGAAGGGTAGGCGAGAGCT‑CGGCAGGGGCCGTCATGGGGGACTCCGGGGCAAGGCAAGGCGGGGAAATCTGAGGGGCGTTATCTTATATCAAATGGTTTCGGGCAGCACGGCCCATTCGCGGGCACGCCCGCTCCCACAGGTACTGca < 2:582087/150‑1 (MQ=255) ggCGAGAGCT‑CGGCAGGGGCCGTCATGGGGGACTCCGGGGCAAGGCAAGGCGGGGAAATCTGAGGGGCGTTATCTTATATCAAATGGTTTCGGGCAGCACGGCCCATTCGCGGGCACGCCCGCTCCCACAGGTACTGCACAGCTCTGAAc < 1:794829/150‑1 (MQ=255) t‑CGGCAGGGGCCGTCATGGGGGACTCCGGGGCAAGGCAAGGCGGGGAAATCTGAGGGGCGTTATCTTATATCAAATGGTTTCGGGCAGCACGGCCCATTCGCGGGCACGCCCGCTCCCACAGGTACTGCACAGCTCTGAACGCCTGTGcc > 1:798740/1‑150 (MQ=255) aGGGGCCGTCATGGGGGACTCCGGGGCAAGGCAAGGCGGGGAAATCTGAGGGGCGTTATCTTATATCAAATGGTTTCGGGCAGCACGGCCCATTCGCGGGCACGCCCGCTCCCACAg > 1:166970/1‑117 (MQ=255) aGGGGCCGTCATGGGGGACTCCGGGGCAAGGCAAGGCGGGGAAATCTGAGGGGCGTTATCTTATATCAAATGGTTTCGGGCAGCACGGCCCATTCGCGGGCACGCCCGCTCCCACAg < 2:166970/117‑1 (MQ=255) cgttcctgtcgtcgctgcccaagcccgcagaaaaggctgcccaagcgcagcaggcttgaagttgcctgggccgacctgtgcaGCCCATTCGCGGGCACGCCCGCTCCCACAGGTACTGCACAGCTCTGAACGCCTGTGCCAAGCCGGTgg > 1:643900‑M1/83‑150 (MQ=255) cctgtcgtcgctgcccaagcccgcagaaaaggctgcccaagcgaagcaggcttgaagttgcctgggccgacctgtgcaGCCCATTCGCGGGCACGCCCGCTCCCACCGGCTTGGCACAGCTCTGAACGCCTGTGCCAAGCCGGTGGGAGc > 2:329142‑M1/79‑150 (MQ=255) tCCGGGGCAAGGCAAGGCGGGGAAATCTGAGGGGCGTTATCTTATATCAAATGGTTTCGGGCAGCACGGCCCATTCGCGGGCACGCCCGCTCCCACAGGTACTGCACAGCTCTGAACGCCTGTGCCAAGCCGGTGGGAGCGGGCGTGc > 1:800321/1‑148 (MQ=255) tCCGGGGCAAGGCAAGGCGGGGAAATCTGAGGGGCGTTATCTTATATCAAATGGTTTCGGGCAGCACGGCCCATTCGCGGGCACGCCCGCTCCCACAGGTACTGCACAGCTCTGAACGCCTGTGCCAAGCCGGTGGGAGCGGGCGTGc < 2:800321/148‑1 (MQ=255) aggcGGGGAAATCTGAGGGGCGTTATCTTATATCAAATGGTTTCGGGCAGCACGGCCCATTCGCGGGCACGCCCGCTCCCACAGGTACTGCACAg > 1:303213/1‑95 (MQ=255) aggcGGGGAAATCTGAGGGGCGTTATCTTATATCAAATGGTTTCGGGCAGCACGGCCCATTCGCGGGCACGCCCGCTCCCACAGGTACTGCACAg < 2:303213/95‑1 (MQ=255) ggggAAATCTGAGGGGCGTTATCTTATATCAAATGGTTTCGGGCAGCACGGCCCATTCGCGGGCACGCCCGCTCCCACAGGTACTGCACAGCTCTGAACGCCTGTGCCAAGCCGGTGGGAGCGGGCGTGCCCGCGAATGGGCTGCACAgg > 2:718040/1‑150 (MQ=255) ccaagcgcagcaggcttgaagttgcctgggccgacctgtgcaGCCCATTCGCGGGCACGCCCGCTCCCACAGGTACTGCACAGCTCTGAACGCCTGTGCCAAGCCGGTgg > 2:467891‑M1/43‑110 (MQ=255) ccaagcgcagcaggcttgaagttgcctgggccgacctgtgcaGCCCATTCGCGGGCACGCCCGCTCCCACAGGTACTGCACAGCTCTGAACGCCTGTGCCAAGCCGGTgg < 1:467891‑M1/68‑1 (MQ=255) tGAGGGGCGTTATCTTATATCAAATGGTTTCGGGCAGCACGGCCCATTCGCGGGCACGCCCGCTCCCACAGGTACt < 1:447421/76‑1 (MQ=255) tGAGGGGCGTTATCTTAAATCAAATGGTTTCGGGCAGCACGGCCCATTCGCGGGCACGCCCGCTCCCACAGGTACt > 2:447421/1‑76 (MQ=255) tatCAAATGGTTTCGGGCAGCACGGCCCATTCGCGGGCACGCCCGCTCCCACAGGTACTGCACAGCTCTGAACGCCTGTGCCAAGCCGGTGGGAGCGGGCGTGCCCGCGAATGGGCTGAACAGGTCGGCCCAGGCAACTTCAAGCctgct > 1:159171/1‑150 (MQ=255) aaaTGGTTTCGGGCAGCACGGCCCATTCGCGGGCACGCCCGCTCCCACAGGTACTGCACAGCTCTGAACGCCTGTGCCAAGCCGGTGGGAGCGGGCGTGCCCGCGAATg > 1:134919/1‑109 (MQ=255) aaaTGGTTTCGGGCAGCACGGCCCATTCGCGGGCACGCCCGCTCCCACAGGTACTGCACAGCTCTGAACGCCTGTGCCAAGCCGGTGGGAGCGGGCGTGCCCGCGAATg > 2:691492/1‑109 (MQ=255) aaaTGGTTTCGGGCAGCACGGCCCATTCGCGGGCACGCCCGCTCCCACAGGTACTGCACAGCTCTGAACGCCTGTGCCAAGCCGGTGGGAGCGGGCGTGCCCGCGAATg < 2:134919/109‑1 (MQ=255) aaaTGGTTTCGGGCAGCACGGCCCATTCGCGGGCACGCCCGCTCCCACAGGTACTGCACAGCTCTGAACGCCTGTGCCAAGCCGGTGGGAGCGGGCGTGCCCGCGAATg < 1:691492/109‑1 (MQ=255) gcctgggccgacctgtgcaGCCCATTCGCGGGCACGCCCGCTCCCACAGGTACTGCACAGCTCTGAACGCCTGTGCCAAGCCGGTGGGAGCggg < 2:116280‑M1/75‑1 (MQ=255) gcctgggccgacctgtgcaGCCCATTCGCGGGCACGCCCGCTCCCACAGGTACTGCACAGCTCTGAACGCCTGTGCCAAGCCGGTGGGAGCggg > 1:116280‑M1/20‑94 (MQ=255) aaTGGTTTCGGGCAGCACGGCCCATTCGCGGGCACGCCCGCTCCCACAGGTACTGCACAGCTCTGAACGCCTGTGCCAAGCCGGTGGGAGCGGGCGTGCCCGCGAATGGGCTGCACAGGTCGGCCCAGGCAACTTCAAGCCTGCTGCGCt > 1:60710/1‑150 (MQ=255) cctgggccgacctgtgcaGCCCATTCGCGGGCACGCCCGCTCCCACAGGTACTGCACAGCTCTGAACGCCTGTGCCAAGCCGGTgg > 2:690356‑M1/19‑86 (MQ=255) cctgggccgacctgtgcaGCCCATTCGCGGGCACGCCCGCTCCCACAGGTACTGCACAGCTCTGAACGCCTGTGCCAAGCCGGTgg < 1:690356‑M1/68‑1 (MQ=255) ggTTTCGGGCAGCACGGCCCATTCGCGGGCACGCCCGCTCCCACAGGTACTGCACAGCTCTGAACGCCTGCGCTTCCGCTGTGGGAGCGGTCGTGCTTGCGAATGGGCTGCACAGGTCGGCCCAGGCAACTTCAAGCCTGCTGCGCTTgg < 1:542781/150‑1 (MQ=37) gggCAGCACGGCCCATTCGCGGGCACGCCCGCTCCCACAGGTACTGCACAGCTCTGAACGCCTGTGCCAAGCCGGTGGGAGCGGGCGTGCCCGCGAATGGGCTGCACAGGTCGGCCCAGGCAACTTCAAGCCTGCTGCGCTTGGGCAGcc > 2:654527/1‑150 (MQ=255) gcagcaCGGCCCATTCGCGTGCACGCCCGCTCCCACCGGTACTGCACAGCTCTGAACGCCTGTGCCAAGCCCGTGGGAGCGGGCGTGCCCGCGAATGCGCTGCACAGGTCGGCCCCGGCAACTTCAACCCTGCTGCACTGGGGCAGCCtt > 1:303911/1‑150 (MQ=38) cagcaCGGCCCATTCGCGGGCACGCCCGCTCCCACAGGTACTGCACAGCTCTGAACGCCTGTGCCAAGCCGGTGGGAGCGGGCGTGCCCGCGAATGGGCTGCACAGGTCGGCCCAg > 2:699882/1‑116 (MQ=255) cagcaCGGCCCATTCGCGGGCACGCCCGCTCCCACAGGTACTGCACAGCTCTGAACGCCTGTGCCAAGCCGGTGGGAGCGGGCGTGCCCGCGAATGGGCTGCACAGGTCGGCCCAg < 1:699882/116‑1 (MQ=255) | GCGACGGATCAGGTCGCAGGCCAGTTGAAGGGTAGGCGAGAGCT‑CGGCAGGGGCCGTCATGGGGGACTCCGGGGCAAGGCAAGGCGGGGAAATCTGAGGGGCGTTATCTTATATCAAATGGTTTCGGGCAGCACGGCCCATTCGCGGGCACGCCCGCTCCCACAGGTACTGCACAGCTCTGAACGCCTGTGCCAAGCCGGTGGGAGCGGGCGTGCCCGCGAATGGGCTGCACAGGTCGGCCCAGGCAACTTCAAGCCTGCTGCGCTTGGGCAGCCTT > NC_002947/1731070‑1731346 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |