New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 1706038 =25 (0.700)7 (0.200) 7/260 3.0 22.6% coding (61/924 nt) PP_1500 lipoprotein
?NC_002947 1706064 = 24 (0.700)coding (87/924 nt) PP_1500 lipoprotein
Rejected: Coverage evenness skew score above cutoff.

TGAGTGCGCTGTCGGCCTGGATGTGCTTCTCCAACTTCCTCAACCACCTGAGCCTGGATCGCATTGAAGCCGACTACGCGAACATTCTCTGAGCACTGCCGCCTGCTCGTCCTCGGCCTGGCCCTGCTGAGCCTTGGCGGCTGCAGCAGCCTGTTGTTCTACCCCGAGCGTGGTCAGGCCTTCACCCCTGAGCGTGCCAAGCTGGAATACCGCGATGTCACGCTGACCACTGCTGATGGCATCCGCCTTCACGGTTGGTGGCTGCCAGCCAAGGCCGGGGTCGAGGTCAAGG  >  NC_002947/1705915‑1706206
                                                                                                                                                     |                                                                                                                                              
tGAGTGCGCTGTCGGCCTGGATGTGCTTCTCCAACTTCCTCAACCACCTGAGCCTGGATCGCATTGAAGCCGACTACGCGAACATTCTCTGAGCACTGCCGCCTGCTCGTCCTCGGCCTGGCCCTGCTGAGCCTTGGCGGCTGCagcagc                                                                                                                                                <  2:397252/150‑1 (MQ=255)
           tCGGCCTGGATGTGCTTCTCCAACTTCCTCAACCACCTGAGCCTGGATCGCATCGAAGCCGACTACGCGAACATGCTCTGAGCACTGCCGCCTGCTCGTCCTCGGCCTGGCCCTGCTGAGCCTTGGCGGCTGCAGCAGCCTGTTGTTCTa                                                                                                                                     <  1:778329/150‑1 (MQ=255)
                   gATGTGCTTCTCCAACTTCCTCAACCACCTGAGCCTGGATCGCATTGAAGCCGACTACGCGAACATTCTCTGAGCACTGCCGCCTGCTCGTCCTCGGCCTGGCCCTGCTGAGCCTTGGCGGCTGCAGCAGCCTGTTGTTCTACCCCGAGc                                                                                                                             <  2:344659/150‑1 (MQ=255)
                        gCTTCTCCAACTTCCTCAACCACCTGAGCCTGGATCGCATTGAAGCCGACTACGCGAACATTCTCTGAGCACTGCCGCCTGCTCGTCCTCGGCCTGGCCCTGCTGAGCCTTGGCGGCTGCAGCAGCCTGTTGTTCTAcc                                                                                                                                   <  1:261681/139‑1 (MQ=255)
                        gCTTCTCCAACTTCCTCAACCACCTGAGCCTGGATCGCATTGAAGCCGACTACGCGAACATTCTCTGAGCACTGCCGCCTGCTCGTCCTCGGCCTGGCCCTGCTGAGCCTTGGCGGCTGCAGCAGCCTGTTGTTCTAcc                                                                                                                                   >  2:261681/1‑139 (MQ=255)
                                           ccaccTGAGCCTGGATCGCATTGAAGCCGACTACGCGAACATTCTCTGAGCACTGCCGCCTGCTCGTCCTCGGCCTGGCCCTGCTGAGCCTTGGCGGCTGCAGCAGCCTGTTGTTCTACCCCGAGCGTGGTCAGGCCTTCACCCCTGAGc                                                                                                     >  1:752027/1‑150 (MQ=255)
                                                          tCGCATTGAAGCCGACTACGCGAACATTCTCTGAGCACTGCCGCCTGCTCGTCCTCGGCCTGGCCCTGCTGAGCCTTGGCGGCTGCAGCAGCCTGTTGTTCTACCCCGAGCGTGGTCAGGCCTTCACCCCTGAGCGTGCCAAGCTGGAAt                                                                                      >  2:115088/1‑150 (MQ=255)
                                                              aTTGAAGCAGACTACGCGAACATTCTATGAGCACTGCCGCCTGCTCGTCCTCGGCCTGGCCCTGCTGAGACTTGGCGGATACAACAGGCTGTTGTTGTAGGCCGAGCGTGTTCACGCTAGCATCGCTGAGCGTGCCAAGCGGGACTACcg                                                                                  >  2:53495/1‑150 (MQ=255)
                                                                             gcgAACATCCTCTGAGCACTGCCGCCTGCTCGTCCTCGGCCTGGCCCTGCTGAGCCTTGGCGGCTGCAGCAGCCTGTTGTTCTACCCCGAGCGTg                                                                                                                          >  1:436219/1‑95 (MQ=255)
                                                                             gcgAACATCCTCTGAGCACTGCCGCCTGCTCGTCCTCGGCCTGGCCCTGCTGAGCCTTGGCGGCTGCAGCAGCCTGTTGTTCTACCCCGAGCGTg                                                                                                                          <  2:436219/95‑1 (MQ=255)
                                                                               gAACATTCTCTGAGCACTGCCGCCTGCTCGTCCTCGGCCTGGCCCTGCTGAGCCTTGGCGGCTGCAGCAGCCTGTTGTTCTACCCCGAGCGTGGTCAGGCCTTCACCCCTGAGCGTGCCAAGCTGGAATACCGCGAt                                                                              <  1:711651/137‑1 (MQ=255)
                                                                               gAACATTCTCTGAGCACTGCCGCCTGCTCGTCCTCGGCCTGGCCCTGCTGAGCCTTGGCGGCTGCAGCAGCCTGTTGTTCTACCCCGAGCGTGGTCAGGCCTTCACCCCTGAGCGTGCCAAGCTGGAATACCGCGAt                                                                              >  2:711651/1‑137 (MQ=255)
                                                                                            gCACTGCCGCCTGCTCGTCCTCGGCCTGGCCCTGCTGAGCCTTGGCGGCTGCAGCAGCCTGTTGTTCTACCCCGAGCGTGGTCAGGCCTTCACCCCTGAGCGTGCCAAGCTGGAATACCGCGATGTCACGCTGACCACTGCTGATGGCAt                                                    >  2:417436/1‑150 (MQ=255)
                                                                                                  ccgccTGCTCGTCCTCGGCCTGGCCCTGCTGAGCCTTGGCGGCTGCAGCAGCCTGTTGTTCTACCCCGAGCGTGGTCAGGCCTTCACCCCTGAGCGTGCCAAGCTGGAATACCGCGATGTCACGCTGACCACTGCTGATGGCATCCGCCt                                              >  1:430533/1‑150 (MQ=255)
                                                                                                       tGCTCGTCCTCGGCCTGGCCCTGCTGAGCCTTGGCGGCTGCAGCAGCCTGTTGTTCTACCCCGAGCGTGGTCAGGCCTTCACCCCTGAGCGTGCCAAGCTGGAATACCGCGATGTCACGCTGACCACTGCTGATGGCATCCGCCTTCACg                                         <  2:568202/150‑1 (MQ=255)
                                                                                                       tGCTCGTCCTCGGCCTGGCCCTGCTGAGCCTTGGCGGCTGCAGCAGCCTGTTGTTCTACCCCGAGCGTGGTCAGGCCTTCACCCCTGAGCGTGCCAAGCTGGAATACCGCGATGTAACGCTGACCACTGCTGATGGCATCCGCCTTCACg                                         <  1:115088/150‑1 (MQ=255)
                                                                                                         cTCGTCCTCGGCCTGGCCCTGCTGAGCCTTGGCGGCTGCAGCAGCCTGTTGTTCTACCCCGGGCGTGGTCAGGCCTTCACCCCTGAGCGTGCCGAGCTGGAATACCGCGATGTCACGCTGACCACTGCTGATGGCATCCGCCTTCACGGt                                       >  1:335802/1‑150 (MQ=255)
                                                                                                           cGTCCTCGGCCTGGCCCTGCTGAGCCTTGGCGGCTGCAGCAGCCTGTTGTTCTACCCCGAGCGTGGTCAGGCCTTCACCCCTGAGCGTGCCAAGCTGGAATACCGCGATGTCACGCTGACCACTGCTGATGGCATCCGCCTTCACGGTtg                                     <  2:430533/150‑1 (MQ=255)
                                                                                                                     cTGGCCCTGCTGAGCCTTGGCGGCTGCAGCAGCCTGTTGTTCTACCCCGAGCGTGGTCAGGCCTTCACCCCTGAGCGTGCCAAGCTGGAATACCGCGATGTCACGCTGACCACTGCTGATGGCATCCGCCTTCACGGTTGGTGGCTgcca                           <  1:417436/150‑1 (MQ=255)
                                                                                                                      tGGCCCTGCTGAGCCTTGGCGGCTGCAGCAGCCTGTTGTTCTACCCCGAGCGTGGTCAGGCCTTCACCCCTGAGCGTGCCAAGCTGGAATACCGCGATGTCACGCTGACCACTGCTGATGGCATCCGCCTTCACGGTTGGTGGCTgccag                          >  1:435071/1‑150 (MQ=255)
                                                                                                                            tgctgcGCCTTCCCGAATGCAGCGTCCTGTTGTTCTACCCCGAGCGTGGTCAGGCCTTCACCCCTGAGCGTGCCAAGCTGGAATACCGCGATGTCACGCTGACCACTGCTGATGGCATCCGCCTTCACGGTTGGTGGCTCCCAGCCAAgg                    >  2:215225/1‑150 (MQ=255)
                                                                                                                                       ggcggcTGCAGCAGCCTGTTGTTCTACCCCGAGCGTGGTCAGGCCTTCACCCCTGAGCGTGCCAAGCTGGAATACCGCGATGTCACGCTGACCACTGCTGATGGCATCCGCCTTCACGGTTGGTGGCTGCCAGCCAAGGCCGGGGTCGAg         <  1:586514/150‑1 (MQ=255)
                                                                                                                                       ggcggcTGCAGCAGCCTGTTGTTCTACCCCGAGCGTGGTCAGGCCTTCACCCCTGAGCGTGCCAAGCTGGAATACCGCGATGTCACACTGACCACTGCTGATGGCATCCGCCTTCACGGTTGGTGGCTGCCAGCCAAGGCCGGGGTCGAg         <  2:137216/150‑1 (MQ=255)
                                                                                                                                              gcagcaGCCTGTTGTTCTACCCCGAGCGTGGTCAGGCCTTCACCCCTGAGCGTGCCAAGCTGGAATACCGCGATGTCACGCTGACCACTGCTGATGGCATCCGCCTTCACGGTTGGTGGCTGCCAGCCAAGGCCGGGGTCGAGGTCAAgg  <  2:752027/150‑1 (MQ=255)
                                                                                                                                                     |                                                                                                                                              
TGAGTGCGCTGTCGGCCTGGATGTGCTTCTCCAACTTCCTCAACCACCTGAGCCTGGATCGCATTGAAGCCGACTACGCGAACATTCTCTGAGCACTGCCGCCTGCTCGTCCTCGGCCTGGCCCTGCTGAGCCTTGGCGGCTGCAGCAGCCTGTTGTTCTACCCCGAGCGTGGTCAGGCCTTCACCCCTGAGCGTGCCAAGCTGGAATACCGCGATGTCACGCTGACCACTGCTGATGGCATCCGCCTTCACGGTTGGTGGCTGCCAGCCAAGGCCGGGGTCGAGGTCAAGG  >  NC_002947/1705915‑1706206

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.