| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 1851813 | 9 (0.270) | 26 (0.750) +CGTG |
22/244 | 0.6 | 74.1% | coding (857/2241 nt) | relA | ATP:GTP 3'‑pyrophosphotransferase |
| ? | NC_002947 | 1851814 = | 9 (0.250) | coding (858/2241 nt) | relA | ATP:GTP 3'‑pyrophosphotransferase | |||||
GCGCTTCATCAGCGACGTGATGAACCAGCTGCAGAACGAGTTGCTCGCCACTGGCGTGAAGGCCGACATCAGCGGCCGGGCGAAACATATCTATTCGATCTGGCGCAAGATGCAGCGCAAAGGCCTGGAGTTCAGCCAGATCTACGACGTGCGTGCGGTGCGCGTGCTGGTGCCGGAAATCCGCGACTGCTACACCGCGCTGGGCATCGTGCACACCTTGTGGCGGCATATTCCCAAGGAGTTCGACGACTACATCGCCAACCCCAAGGAGAACGGCTAC > NC_002947/1851667‑1851946 | ttcatcagcgacgtgatgaaccagctgcagaacgagttgctcgccactggcgtgaaggccgacatcagcggccgggcgaaacatatctattcgatctggcgcaagatgcagcgcaaaggcctggagttcagccagatctacgacgtgcgt > 1:316743‑M2/148‑150 (MQ=255) gacgtgatgaaccagctgcagaacgagttgctcgccactggcgtgaaggccgacatcagcggccgggcgaaacatatctattcgatctggcgcaagatgcagcgcaaaggcctggagttcagccagatctacgacgtgCGTGCgtgcggt < 2:118406‑M2/12‑1 (MQ=255) agaacgagttgctcgccactggcgtgaaggccgacatcagcggccgggcgaaacatatctattcgatctggcgcaagatgcagcgcaaaggcctggagttcagccagatctacgacgtgCGTGCGTGCGGTGCGCGt > 2:748763‑M2/120‑137 (MQ=255) agaacgagttgctcgccactggcgtgaaggccgacatcagcggccgggcgaaacatatctattcgatctggcgcaagatgcagcgcaaaggcctggagttcagccagatctacgacgtgCGTGCGTGCGGTGCGCGt < 1:748763‑M2/18‑1 (MQ=255) acgagttgctcgccactggcgtgaaggccgacatcagcggccgggcgaaacatatctattcgatctggcgcaagatgcagcgcaaaggcctggagttcagccagatctacgacgtgCGTGCGTGCGGTGCGCGTGCTGGTGCCGGAAATc < 2:271324‑M2/34‑1 (MQ=255) ccactggcgtgaaggccgacatcagcggccgggcgaaacatatctattcgatctggcgcaagatgcagcgcaaaggcctggagttcagccagatctacgacgtgCGTGCGTGCGGTGCGCGTGCTGGTGCCGGAAATCcgc > 1:224328‑M2/105‑141 (MQ=255) ccactggcgtgaaggccgacatcagcggccgggcgaaacatatctattcgatctggcgcaagatgcagcgcaaaggcctggagttcagccagatctacgacgtgCGTGCGTGCGGTGCGCGTGCTGGTGCCGGAAATCcgc < 2:224328‑M2/37‑1 (MQ=255) tgaaggccgacatcagcggccgggcgaaacatatctattcgatctggcgcaagatgcagcgcaaaggcctggagttcagccagatctacgacgtgCGTGCGTGCGGTGCGCGTGCTGGTGCCGGAAATCCGCGACTGCTACACCGCGCTg < 1:429490‑M2/55‑1 (MQ=255) cgacatcagcggccgggcgaaacatatctattcgatctggcgcaagatgcagcgcaaaggcctggagttcagccagatctacgacgtgCGTGCGTGCGGTGCGCGTGCTGGTGCCGGAAATCCGCGACTGCTACACCGCGCTGGGCATCg > 2:651993‑M2/89‑150 (MQ=255) acatcagcggccgggcgaaacatatctattcgatctggcgcaagatgcagcgcaaaggcctggagttcagccagatctacgacgtgCGTGCGTGCGGTGCGCGTGCTGGTGCCGGAAATCCGCGACTGCTACACCGCGCTGGGCATCGTg < 2:220006‑M2/64‑1 (MQ=255) cagcggccgggcgaaacatatctattcgatctggcgcaagatgcagcgcaaaggcctggagttcagccagatctacgacgtgCGTGCGTGCGGTGCGCGTGCTGGTGCCGGAAATCCGCGACTGCTACACCGCGCTGGGCATCGTGcaca < 2:316743‑M2/68‑1 (MQ=255) aaacatatctattcgatctggcgcaagatgcagcgcaaaggcctggagttcagccagatctacgacgtgCGTGCGTGCGGTGCGCGTGCTGGTGCCGGAAATCCGCGACTGCTACACCGCGCTGGGCATCGTGCACACCTTGTGGCGGCa < 1:651993‑M2/81‑1 (MQ=255) tctattcgatctggcgcaagatgcagcgcaaaggcctggagttcagccagatctacgacgtgCGTGCGTGCGGTGCGCGTGCTGGTGCCGGAAATCCGCGACTGCTACACCGCGCTGGGCATCGTGCACACCTTGTGGCGGCATATTccc > 1:797537‑M2/63‑150 (MQ=255) attcgatctggcgcaagatgcagcgcaaaggcctggagttcagccagatctacgacgtgCGTGCGTGCGGTGCGCGTGCTGGTGCCGGAAATCCGCGACTGCTACACCGCGCTGGGCATCGTGCACACCTTGTGGCGGCATATTCCCAAg < 2:522267‑M2/91‑1 (MQ=255) attcgatctggcgcaagatgcagcgcaaaggcctggagttcagccagatctacgacgtgCGTGCGTGCGGTGCGCGTGCTGGTGCCGGAAATCCGCGACTGCTACACCGCGCTGGGCATCGTGCACACCTTGTGGCGGCATATTCCCAAg < 1:373508‑M2/91‑1 (MQ=255) tggatcgggcggaagatgcagcgcaaaggcctggagtgcagccagatgtacgacgtgCGTGCGTGCGGTGCGCGTGCTGGTGCCGGAAAGCCGCGACTGCTACACCGCGCTGGGCATGGTGCACACCTTGTGGCGGCATATTCCCAAGGa < 2:167159‑M2/93‑1 (MQ=255) gatctggcgcaagatgcagcgcaaaggcctggagttcagccagatctacgacgtgCGTGCGTGCGGTGCGCGTGCTGGTGCCGGAAATCCGCGACTGCTACACCGCGCTGGGCATCGTGCACACCTTGTGGCGGCATATTCCCAAGGAGt < 2:821288‑M2/95‑1 (MQ=255) ttCGATCTGGCGCAAGATGCAGCGCAAAGGCCTGGAGTTCAGCCAGATCTACGACGTGCGTGCGGTGCGCGTGCTGGTGCCGGAAATCCGCGACTGCTACACCGCGCAACCCTTCGTGCACACCTTGTGGCGGCATATTCCCAAGGAGtt > 1:446192/1‑150 (MQ=255) cgcaagatgcagcgcaaaggcctggagttcagccagatctacgacgtgCGTGCGTGCGGTGCGCGTGCTGGTGCCGGAAATCCGCGACTGCTACACCGCGCTGGGCATCGTGCACACCTTGTGGCGGCATATTCCCAAGGAGTTcgacga > 2:563466‑M2/49‑150 (MQ=255) gcaagatgcagcgcaaaggcctggagttcagccagatctacgacgtgCGTGCGTGCGGTGCGCGTGCTGGTGCCGGAAATCCGCGACTGCTACACCGCGCTGGGCATCGTGCACACCTTGTGGCGGCATATTCCCAAGGAGTTCgacgac > 2:603198‑M2/48‑150 (MQ=255) ggCGCAAGATGCAGCGCAAAGGCCTGGAGTTCAGCCAGATCTACGACGTGCGTGCGGTGCGCGTGCTGGTGCCGGAAATCCGCGACTGCTACACCGCGCTGGGCATCGTGCACACCTTGTGGCGGCATATTCCCAAGGAGTTCGACGACt > 2:675505/1‑150 (MQ=255) caagatgcagcgcaaaggcctggagttcagccagatctacgacgtgCGTGCGTGCGGTGCGCGTGCTGGTGCCGGAAATCCGCGACTGCTACACCGCGCTGGGCATCGTGCACACCTTGTGGCGGCATATTCCCAAGGAGTTcgac > 2:795834‑M2/47‑146 (MQ=255) caagatgcagcgcaaaggcctggagttcagccagatctacgacgtgCGTGCGTGCGGTGCGCGTGCTGGTGCCGGAAATCCGCGACTGCTACACCGCGCTGGGCATCGTGCACACCTTGTGGCGGCATATTCCCAAGGAGTTcgac < 1:795834‑M2/100‑1 (MQ=255) caagatgcagcgcaaaggcctggagttcagccagatctacgacgtgCGTGCGTGCGGTGCGCGTGCTGGTGCCGGAAATCCGCGACTGCTACACCGCGCTGGGCATCGTGCACACCTTGTGGCGGCATATTCCCAAGGAGTTCGACGACt > 1:767060‑M2/47‑150 (MQ=255) gcAAGATGCAGCGCAAAGGCCTGGAGTTCAGCCAGATCTACGACGTGCGTGCGGTGCGCGTGCTGGTGCCGGAAATCCGCGACTGCTACACCGCGCTGGGc < 2:833924/101‑1 (MQ=255) gcAAGATGCAGCGCAAAGGCCTGGAGTTCAGCCAGATCTACGACGTGCGTGCGGTGCGCGTGCTGGTGCCGGAAATCCGCGACTGCTACACCGCGCTGGGc > 1:833924/1‑101 (MQ=255) gcAAGATGCAGCGCAAAGGCCTGGAGTTCAGCCAGATCTACGACGTGCGTGCGGTGCGCGTGCTGGTGCCGGAAATCCGCGACTGCTACACCGCGCTGGGCATCGTGCACACCTTGTGGCGGCATATTCCCAAGGAGTTCGACGACTACa > 2:681513/1‑150 (MQ=255) gcagcgcaaaggcctggagttcagccagatctacgacgtgCGTGCGTGCGGTGCGCGTGCTGGTGCCGGAAATCCGCGACTGCTACGCCGCGCTGGCCATCGTGCCCACCTTGTGACGGCATATTCCCAAGGAGTTCGACGACTACATCg > 1:485732‑M2/41‑150 (MQ=255) gcgcaaaggcctggagttcagccagatctacgacgtgCGTGCGTGCGGTGCGCGTGCTGGTGCCGGAAATCCGCGa < 2:106644‑M2/39‑1 (MQ=255) gcgcaaaggcctggagttcagccagatctacgacgtgCGTGCGTGCGGTGCGCGTGCTGGTGCCGGAAATCCGCGa > 1:106644‑M2/38‑76 (MQ=255) gCCTGGAGTTCAGCCAGATCTACGACGTGCGTGCGGTGCGCGTGCTGGTGCCGGAAATCCGCGACTGCTACACCGCGCTGGGCATCGTGCACACCTTGTGGCGGCATATTCCCAAGGAGTTCGACGACTACATCGCCAACCCCAAGgaga > 1:829012/1‑150 (MQ=255) ccTGGAGTTCAGCCAGATCTACGACGTGCGTGCGGTGCGCGTGCTGGTGCCGGAAATCCGCGACTGCTACACCGCGCTGGGCATCGTGCACACCTTGTGGCGGCATATTCCCAAGGAGTTCGACGACTACATCGCCAACCCCAAGGAGaa < 1:681513/150‑1 (MQ=255) cTGGAGTTCAGCCAGATCTACGACGTGCGTGCGGTGCGCGTGCTGGTGCCGGAAATCCGCGACTGCTACACCGCGCTGGGCATCGTGCACACCTTGTGGCGGCATATTCCCAAGGAGTTCGACGACTACATCGCCAACCCCAAGGAGAAc > 1:810399/1‑150 (MQ=255) gtCAGCCAGATCTACGACGTGCGTGCGGTGCGCTTGCACAGACCGTAGCTTCTGGATTGCGACACCGCGCGGGGCATCGGGCACACCTTGTGGCGGCATATTCCCAAGGAGTTCGACGACTACATCGCCAACTCCAAGGAGAACGGCTAc < 2:446192/149‑1 (MQ=255) | GCGCTTCATCAGCGACGTGATGAACCAGCTGCAGAACGAGTTGCTCGCCACTGGCGTGAAGGCCGACATCAGCGGCCGGGCGAAACATATCTATTCGATCTGGCGCAAGATGCAGCGCAAAGGCCTGGAGTTCAGCCAGATCTACGACGTGCGTGCGGTGCGCGTGCTGGTGCCGGAAATCCGCGACTGCTACACCGCGCTGGGCATCGTGCACACCTTGTGGCGGCATATTCCCAAGGAGTTCGACGACTACATCGCCAACCCCAAGGAGAACGGCTAC > NC_002947/1851667‑1851946 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |