| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 6009165 = | 35 (0.640) | 10 (0.240) | 8/206 | 3.8 | 33.6% | intergenic (+6/+76) | norM/PP_5263 | multidrug resistance protein NorM/GGDEF domain‑containing protein |
| ? | NC_002947 | 6009242 = | 13 (0.310) | coding (1667/1668 nt) | PP_5263 | GGDEF domain‑containing protein | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
CTGCGACCAGGTGCAAGGCTTCCTGGTCAGCAGACCGCTACCGATAGGGGAATTGATGGCGTATTTGCTGCAGGCGCCTGGCCGCCAGTTGGAGGGTGTCCTTTAGGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGGACCGCGCAATCCTGTGGGAGCGGGCGTGCCCGCGAAGAGGCCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/6009346‑6009165‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cctgtgggagcgggcgtgcccgcgaagaggcccTAAAGGACACCCTCCAACTGGCGGCCAGGCGCCTGCAGCAAATACGCCATCAATTCCCCTATCGGTAGCGGTCTGCTGACCAGGAAGCCTTGCACCTGGTCGCAGCCAAACCCGCGCAACAACGTCAGCTGCTCTTCACTCTCCACAC > NC_002947/6009242‑6009389 CTGCGACCAGGTGCAAGGCTTCCTGGTCAGCAGACCGCTACCGATAGGGGAATTGATGGCGTATTTGCTGCAGGCGCCTGGCCGCCAGTTGGAGGGTGTCCTTTAGGGCTTCTTCGCGGGCACGCCCGCTCCCACAGGGACCGCGCAATC < 1:1269027/150‑1 ACCAGGTGCAAGGCTTCCTGGTCAGCAGACCGCTACCGATAGGGGAATTGATGGCGTATTTGCTGCAGGCGCCTGGCCGCCAGTTGGAGGGTGTCCTTTAGGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGGACCGCGCAATCCTGTG < 1:196362/150‑1 CCAGGTGCAAGGCTTCCTGGTCAGCAGACCGCTACCGATAGGGGAATTGATGGCGTATTTGCTGCAGGCGCCTGGCCGCCAGTTGGAGGGTGTCCTTTAGGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGGACCGCGCAATCCTGTGG < 2:105307/150‑1 CAGGTGCAAGGCTTCCTGGTCAGCAGACCGCTACCGATAGGGGAATTGATGGCGTATTTGCTGCAGGCGCCTGGCCGCCAGTTGGAGGGTGTCCTTTAGGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGGACCGCGCAATCCTGTGGG > 2:225146/1‑150 CAGGTGCAAGGCTTCCTGGTCAGCAGACCGCTACCGATAGGGGAATTGATGGCGTATTTGCTGCAGGCGCCTGGCCGCCAGTTGGAGGGTGTCCTTTAGGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGGACCGCGCAATCCTGTGGG < 2:1143377/150‑1 GTGCAAGGCTTCCTGGTCAGCAGACCGCTACCGATAGGGGAATTGATGGCGTATTTGCTGCAGGCGCCTGGCCGCCAGTTGGAGGGTGTCCTTTAGGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGGACCGCGCAATCCTGTGGGAGC < 1:225146/150‑1 GCAAGGCTTCCTGGTCAGCAGACCGCTACCGATAGGGGAATTGATGTCGGATTTGCTGCAGGCGCCTGGCCGCCAGTTGGAGGGTGTCCTTTAGGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGGACCGCGCAATCCTGTGGGAGCGG < 1:145500/150‑1 TCCTGGTCAGCAGACCGCTACCGATAGGGGAATTGATGGCGTATTTGCTGCAGGCGCCTGGCCGCCAGTTGGAGGGTGTCCTTTAGGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGGACCGCGCAATCCTGTGGGAGCGGGCGT > 2:509717/1‑146 TCCTGGTCAGCAGACCGCTACCGATAGGGGAATTGATGGCGTATTTGCTGCAGGCGCCTGGCCGCCAGTTGGAGGGTGTCCTTTAGGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGGACCGCGCAATCCTGTGGGAGCGGGCGT < 1:509717/146‑1 GACCGCTACCGATAGGGGAATTGATGGCGTATTTGCTGCAGGCGCCTGGCCGCCAGTTGGAGGGTGTCCTTTAGGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGGACCGCGCAATCCTGTGGGAGCGGGCGTGCCC > 2:753244/1‑138 GACCGCTACCGATAGGGGAATTGATGGCGTATTTGCTGCAGGCGCCTGGCCGCCAGTTGGAGGGTGTCCTTTAGGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGGACCGCGCAATCCTGTGGGAGCGGGCGTGCCC < 1:753244/138‑1 GCTCCCACAGGGACCGCGCAATCCTGTGGGAGCGGGCGTGCCCGCGAAGAGGCCCTAAAGGACACCCTCCAACTGGCGGCCAGGCGCCTGCAGCAAATACGCCATCAATTCCCCTATCGGTAGCGGTCTGCTGACCAGGAAGCCT < 2:562604/145‑1 GCTCCCACAGGGACCGCGCAATCCTGTGGGAGCGGGCGTGCCCGCGAAGAGGCCCTAAAGGACACCCTCCAACTGGCGGCCAGGCGCCTGCAGCAAATACGCCATCAATTCCCCTATCGGTAGCGGTCTGCTGACCAGGAAGCCT > 1:562604/1‑145 TCCCACAGGGACCGCGCAATCCTGTGGGAGCGGGCGTGCCCGCGAAGAGGCCCTAAAGGACACCCTCCAACTGGCGGCCAGGCGCCTGCAGCAAATACGCCATCAATTCCCCTATCGGTAGCGGTCTGCTGACCAGGAAGCCTTGCACCT > 2:825553/1‑150 TCCCACAGGGACCGCGCAATCCTGTGGGAGCGGGCGTGCCCGCGAAGAGGCCCTAAAGGACACCCTCCAACTGGCGGCCAGGCGCCTGCAGCAA < 2:992102/94‑1 TCCCACAGGGACCGCGCAATCCTGTGGGAGCGGGCGTGCCCGCGAAGAGGCCCTAAAGGACACCCTCCAACTGGCGGCCAGGCGCCTGCAGCAA > 1:992102/1‑94 CCACAGGGACCGCGCAATCCTGTGGGAGCGGGCGTGCCCGCGAAGAGGCCCTAAAGGACACCCTCCAACTGGCGGCCAGGCGCCTGCAGCAAATACGCCATCAATTCCCCTATCGGTAGCGGTCTGCTGACCAGGAAGCCTTGCACCT < 2:786076/148‑1 CCACAGGGACCGCGCAATCCTGTGGGAGCGGGCGTGCCCGCGAAGAGGCCCTAAAGGACACCCTCCAACTGGCGGCCAGGCGCCTGCAGCAAATACGCCATCAATTCCCCTATCGGTAGCGGTCTGCTGACCAGGAAGCCTTGCACCT > 1:786076/1‑148 ACAGGGACCGCGCAATCCTGTGGGAGCGGGCGTGCCCGCGAAGAGGCCCTAAAGGACACCCTCCAACTGGCGGCCAGGCGCCTGCAGCAAATACGCCATCAATTCCCCTATCGGTAGCGGTCTGCTGACCAGGAAGCCTTGCACCTGGTC > 2:1328675/1‑150 ACAGGGACCGCGCAATCCTGTGGGAGCGGGCGTGCCCGCGAAGAGGCCCTAAAGGACACCCTCCAACTGGC > 1:350828/1‑71 ACAGGGACCGCGCAATCCTGTGGGAGCGGGCGTGCCCGCGAAGAGGCCCTAAAGGACACCCTCCAACTGGC < 2:350828/71‑1 CTGTGGGAGCGGGCGTGCCCGCGAAGAGGCCCTAAAGGACACCCTCCAACTGGCGGCCAGGCGCCTGCAGCAAATACGCCATCAATTCCCCTATCGGTAGCGGTCTGCTGACCAGGAAGCCTTGCACCTGGTCGCAGCCAAACCCGCGCA > 1:705153/1‑150 AGCGGGCGTGCCCGCGAAGAGGCCCTAAAGGACACCCTCCAACTGGCGGCCAGGCGCCTGCAGCAAATACGCCATCAATTCCCCTATCGGTAGCGGTCTGCTGACCAGGAAGCCTTGCACCTGGTCGCAGCCAAACCCGCGCAACAACGT < 1:1328675/150‑1 GGCGTGCCCGCGAAGAGGCCCTAAAGGACACCCTCCAACTGGCGGCCAGGCGCCTGCAGCAAATACGCCATCAATTCCCCTATCGGTAGCGGTCTGCTGACCAGGAAGCCTTGCACCTGGTCGCAGCCAAACCCGCGCAACAACGTCAGC < 2:196362/150‑1 gagagtGAAGAGGCCCTAAAGGACACCCTCCAACTGGCGGCCAGGCGCCTGCAGCAAATACGCCATCAATTCCCCTATCGGTAGCGGTCTGCTGACCAGGAAGCCTTGCACCTGGTCGCAGCCAAACCCGCGCAACAACGTCAGCTGCTC > 2:402839/7‑150 CCGCGAAGAGGCCCTAAAGGACACCCTCCAACTGGCGGCCAGGCGCCTGCAGCAAATACGCCATCAATTCCCCTATCGGTAGCGGTCTGCTGACCAGGAAGCCTTGCACCTGGTCGCAGCCAAACCCGCGCAACAACGTCAGCTGCTCTT > 2:444761/1‑150 GAGGCCCTAAAGGACACCCTCCAACTGGCGGCCAGGCGCCTGCAGCAAATACGCCATCAATTCCCCTATCGGTAGCGGTCTGCTGACCAGGAAGCCTTGCACCTGGTCGCAGCCAAACCCGCGCAACAACGTCAGCTGCTCTTCACTCTC < 1:402839/150‑1 GAGGCCCTAAAGGACACCCTCCAACTGGCGGCCAGGCGCCTGCAGCAAATACGCCATCAATTCCCCTATCGGTAGCGGTCTGCTGACCAGGAAGCCTTGCACCTGGTCGCAGCCAAACCCGC > 2:313408/1‑122 GAGGCCCTAAAGGACACCCTCCAACTGGCGGCCAGGCGCCTGCAGCAAATACGCCATCAATTCCCCTATCGGTAGCGGTCTGCTGACCAGGAAGCCTTGCACCTGGTCGCAGCCAAACCCGC < 1:313408/122‑1 GCCCTAAAGGACACCATCCAACTGGCGGCCAGGCGCCTGCAGCAAATACGCCATCAATTCCCCTATCGGTAGCGGTCTGCTGACCAGGAAGCCTTGCACCTGGTCGCAGCCAAACCCGCGCAACAACGT < 2:554172/129‑1 GCCCTAAAGGACACCATCCAACTGGCGGCCAGGCGCCTGCAGCAAATACGCCATCAATTCCCCTATCGGTAGCGGTCTGCTGACCAGGAAGCCTTGCACCTGGTCGCAGCCAAACCCGCGCAACAACGT > 1:554172/1‑129 CCTAAAGGACACCCTCCAACTGGCGGCCAGGCGCCTGCAGCAAATACGGCAGTTATGTCCCTATCGGTAGCGGTCTGCTGACCAGGAAGCCTTGCACCTGGTCGCAGCCAAACCCGCGCAACAACGTCAGCTGCTCTTCACTCTCCACAC > 1:1094133/1‑150 CCTAAAGGACACCCTCCAACTGGCGGCCAGGCGCCTGCAGCAAATACGCCATCAATTCCCCTATCGGTAGCGGTCTGCTGACCCGGAAGCCTTGCACCTGGTCGCAGCCAAACCCGCGCAACAACGTCAGCTGCTCTTCACGCTCCACAC > 1:1058171/1‑150 CCTAAAGGACACCCTCCAACTGGCGGCCAGGCGCCTGCAGCAAATACGCCATCAATTCCCCTATCGGTAGCGGTCTGCTGACCAGGAAGCCTTGCACCTGGTCGCAGCCAAACCCGCGCAACAACGTCAGCTGCTCTTCACTCTCCACAC > 2:78363/1‑150 CTGCGACCAGGTGCAAGGCTTCCTGGTCAGCAGACCGCTACCGATAGGGGAATTGATGGCGTATTTGCTGCAGGCGCCTGGCCGCCAGTTGGAGGGTGTCCTTTAGGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGGACCGCGCAATCCTGTGGGAGCGGGCGTGCCCGCGAAGAGGCCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/6009346‑6009165‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cctgtgggagcgggcgtgcccgcgaagaggcccTAAAGGACACCCTCCAACTGGCGGCCAGGCGCCTGCAGCAAATACGCCATCAATTCCCCTATCGGTAGCGGTCTGCTGACCAGGAAGCCTTGCACCTGGTCGCAGCCAAACCCGCGCAACAACGTCAGCTGCTCTTCACTCTCCACAC > NC_002947/6009242‑6009389 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |