| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 90374 | 67 (1.220) | 13 (0.270) | 11/240 | 3.5 | 19.8% | intergenic (+49/+73) | PP_0079/PP_0080 | transcriptional regulator/hypothetical protein |
| ? | NC_002947 | = 90397 | 46 (0.950) | intergenic (+72/+50) | PP_0079/PP_0080 | transcriptional regulator/hypothetical protein | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
TGGAGGGGAGTTTGCGCTCGGAACGCGGCTATTACGTAGTCTTACCGCCGCGCAAGCGGCGTGGGGCGTTGATCGAGCGGTTTGTGGATTGGTTGGAGCAGGAGCGCAGCCTTTGAGATTTTGGGGCCGCTTTGCGGCCCATCGCGACACAAGGCCGCTCCCACA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/90210‑90374‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑caaggccgctcccacaTGGGCCGGCGTGTGCAGTGCCACTGTGGGAGCGGCCTTGTGTCGCGATGGGCCGCAAAGCGGCCCCAAAATCTCAAAGGCTGCGCTCCTGCTCCAACCAATCCACAAACCGCTCGATCAACGCCCCACGCCGCTTGCGCGGCGGTAAGA < NC_002947/90397‑90249 TGGAGGGGAGTTTGCGCTCGGAACGCGGCTATTACGTAGTCTTACCGCCGCGCAAGCGGCGTGGGGCGTTGATCGAGCGGTTTGTGGATTGGTTGGAGCAGGAGCGCAGCCTTTGAGATTTTGGGGCCGCTTTGCGGCCCATCGCGACAC > 1:877572/1‑150 GGGGAGTTTGCGCTCGGAACGCGGCTATTACGTAGTCTTACCGCCGCGCAAGCGGCGTGGGGCGTTGATCGAGCGGTTTGTGGATTGGTTGGAGCAGGAGCGCAGCCTTTGAGATTTTGGGGCCGCTTTGCGGCCCATCGCGACACAAGG < 1:112151/150‑1 GGGGAGTTTGCGCTCGGAACGCGGCTATTACGTAGTCTTACCGCCGCGCAAGCGGCGTGGGGCGTTGATCGAGCGGTTTGTGGATTGGTTGGAGCAGGAGCGCAGCCTTTGAGATTTTGGGGCCGCTTTGCGGCCCATCGCGACACAAGG > 2:116595/1‑150 GAGTTTGCGCTCGGAACGCGGCTATTACGTAGTCTTACCGCCGCGCAAGCGGCGTGGGGCGTTGATCGAGCGGTTTGTGGATTGGTTGGAGCAGGAGCGCAGCCTTTGAGATTTTGGGGCCGCTTTGCGGCCCATCGCGCCACAAGGCCc > 2:231461/1‑149 GCTCGGAACGCGGCTATTACGTAGTCTTACCGCCGCGCAAGCGGCGTGGGGCGTTGATCGAGCGGTTTGTGGATTGGTTGGAGCAGGAGCGCAGCCTATGAAATTGTGGGGCCGCTTTGCGGCCCATCGCGACACAAGGCCGCTCCCACA > 2:1035282/1‑150 TTACGTAGTCTTACCGCCGCGCAAGCGGCGTGGGGCGTTGATCGAGCGGTTTGTGGATTGGTTGGAGCAGGAGCGCAGCCTTTGAGATTTTGGGGCCGCTTTGCGGCCCATCGCGACACAAGGCCGCTCCCACATGGGCCGGCGTGTGCA > 2:1045743/1‑150 CGTAGTCTTACCGCCGCGCAAGCGGCGTGGGGCGTTGATCGAGCGGTTTGTGGATTGGTTGGAGCAGGAGCGCAGCCTTTGAGATTTTGGGGCCGCTTTGCGGCCCATCGCGACGCAAGGCCGCTCCCACATGGGCCGGCGTGTGCAGTG > 2:419550/1‑150 CGCCGCGCAAGCGGCGTGGGGCGTTGATCGAGCGGTTTGTGGATTGGTTGGAGCAGGAGCGCAGCCTTTGAGATTTTGGGGCCGCTTTGCGGCCCATCGCGACACAAGGCCGCTCCCACATGGGCCGGCGTGTGCAGTGCCACTGTGGGA < 1:1045743/150‑1 CCGCGCAAGCGGCGTGGGGCGTTGATCGAGCGGTTTGTGGATTGGTTGGTGCAGGAGCGCAGCCTTTGAGATTTTGGGGCCGCTTTGCGGCCCATCGCGACGCAAGGCCGCTCCCACATGGGCCGGCGTGTGCAGTGCCACTGTGGGAGC < 1:419550/150‑1 CCGCGCAAGCGGCGTGGGGCGTTGATCGAGCGGTTTGTGGATTGGTTGGAGCAGGAGCGCAGCCTTTGAGATTTTGGGGCCGCTTTGCGGCCCATCGCGACGCAAGGCCGCTCCCACATGGGCCGGCGTGTGCAGTGCCACTGTGGGAGC < 2:1207547/150‑1 GGCGTGGGGCGTTGATCGAGCGGTTTGTGGATTGGTTGGAGCAGGAGCGCAGCCTTTGAGATTTTGGGGCTGCTGCGCAGCCCATCGCGACGCAAGGCCGCTCCCACATGGGCCGGCGTGTGCAGTGCCACTGTGGGAGCGGCCTTGTGT > 2:969295/1‑150 GAGCGGTTTGTGGATTGGTTGGAGCAGGAGCGCAGCCTTTGAGATTTTGGGGCCGCTTTGCGGCCCATCGCGACACAAGGCCGCTCCCACATGGGCCGGCGTGTGCAGTGCCACTGTGG < 1:209719/119‑1 GAGCGGTTTGTGGATTGGTTGGAGCAGGAGCGCAGCCTTTGAGATTTTGGGGCCGCTTTGCGGCCCATCGCGACACAAGGCCGCTCCCACATGGGCCGGCGTGTGCAGTGCCACTGTGG > 2:209719/1‑119 GATTGGTTGGAGCAGGAGCGCAGCCTTTGAGATTTTGGGGCCGCTTTGCGGCCCATCGCGACACAAGGCCGCTCCCACATGGGCCGGCGTGTGCAGTGCCACTGTGGGAGCGGC > 1:1016924/1‑114 GATTGGTTGGAGCAGGAGCGCAGCCTTTGAGATTTTGGGGCCGCTTTGCGGCCCATCGCGACACAAGGCCGCTCCCACATGGGCCGGCGTGTGCAGTGCCACTGTGGGAGCGGC < 2:1016924/114‑1 GGTTGGAGCAGGAGCGCAGCCTTTGAGATTTTGGGGCTGCTGCGCAGCCCATCGCGACGCAAGGCCGCTCCCACATGGGCCGGCGTGTGCAGTGCCACTGTGGGAGCGGCCTTGTGTCGCGATGGGCCGCAAAGCGGCCCCAAAATCTCA < 1:969295/150‑1 GCAGGAGCGCAGCCTTTGAGATTTTGGGGCCGCTTTGCGGCCCATCGCGACGCAAGGCCGCTCCCACATGGGCCGGCGTGTGCAGTGCCACTGTGGGAGC < 1:539170/100‑1 GCAGGAGCGCAGCCTTTGAGATTTTGGGGCCGCTTTGCGGCCCATCGCGACGCAAGGCCGCTCCCACATGGGCCGGCGTGTGCAGTGCCACTGTGGGAGC > 2:539170/1‑100 GGAGCGCAGCCTTTGAGATTTTGGGGCCGCTTTGCGGCCCATCGCGACACAAGGCCGCTCC < 1:793680/61‑1 GGAGCGCAGCCTTTGAGATTTTGGGGCCGCTTTGCGGCCCATCGCGACACAAGGCCGCTCC > 2:793680/1‑61 AAGGCCGCTCCCACATGGGCCGGCGTGTGCAGTGCCACTGTGGGAGCGGCCTTGTGTCGCGATGGGCCGCAAAGCGGCCCCAAAATCTCAAAGGCTGCGCTCCTGCTCCAACCAATCCACAAACCGCTCGATCAACGCCCCACGCCGCTT < 2:646366/150‑1 GCCGCTCCCACATGGGCCGGCGTGTGCAGTGCCACTGTGGGAGCGGCCTTGTGTCGCGATGGGCCGCAAAGCGGCCCCAAAATCTCAAAGGCTGCGCTCCTGCTCCAACCAATCCACAAACCGCTCGATCAACGCCCCACGCCGCTTGCG < 2:32984/150‑1 CGCTCCCACATGGGCCGGCGTGTGCAGTGCCACTGTGGGAGCGGCCTTGTGTCGCGATGGGCCGCAAAGCGGCCCCAAAATCTCAAAGGCTGCGCTCCTGCTCCAACCAATCCACAAACCGCTCGATCAACGCCCCACGC > 2:596715/1‑140 CGCTCCCACATGGGCCGGCGTGTGCAGTGCCACTGTGGGAGCGGCCTTGTGTCGCGATGCGCCGCAAAGCGGCCCCAAAATCTCAAAGGCTGCGCTCCTGCTCCAACCAATCCACAAACCGCTCGATCAACGCCCCACGC < 1:596715/140‑1 GCTCCCACATGGGCCGGCGTGTGCAGTGCCACTGTGGGAGCGGCCTTGTGTCGCGATGGGCCGCAAAGCGGCCCCAAAATCTCAAAGGCTGCGCTCCTGCTCCAACCAATCCACAAACCGCTCGATCAACGCCCCACGCCGCTTGCGCGG > 2:1176909/1‑150 TCCCACATGGGCCTGCGTGTGCAGTGCCACTGTGGGAGCGGCCTTGTGTCGCGATGGGCCGCAAAGCGGCCCCAAAATCTCAAAGGCTGCGCTCCTGCTCCAACCAATCCACAACCCGCTCGATCAACGCCCCACGCCGCTTGCGCGGCG < 1:260673/150‑1 CCACATGGGCCGGCGTGTGCAGTGCCACTGTGGGAGCGGCCTTGTGTCGCGATGGGCCGCAAAGCGGCCCCAAAATCTCAAAGGCTGCGCTCCTGCTCCAACCAATCCACAAACCGCTCGATCAACGCCCGACGCCGCTTGCGCGGCGGT > 2:877572/1‑150 CCACATGGGCCGGCGTGTGCAGTGCCACTGTGGGAGCGGCCTTGTGTCGCGATGGGCCGCAAAGCGGCCCCAAAATCTCAAAGGCTGCGCTCCTGCTCCAACCAATCCACAAACCGCTCGATCAACGCCCC > 1:359511/1‑131 CCACATGGGCCGGCGTGTGCAGTGCCACTGTGGGAGCGGCCTTGTGTCGCGATGGGCCGCAAAGCGGCCCCAAAATCTCAAAGGCTGCGCTCCTGCTCCAACCAATCCACAAACCGCTCGATCAACGCCCC < 2:359511/131‑1 ACATGGGCCGGCGTGTGCAGTGCCACTGTGGGAGCGGCCTTGTGTCGCGATGGGCCGCAAAGCGGCCCCAAAATCTCAAAGGCTGCGCTCCTGCTCCAACCAATCCACAAACCGCTCGATCAACGCCCCACGCCGCTTGCGCGGCGGTAA < 1:613928/150‑1 ACATGGGCCGGCGTGTGCAGTGCCACTGTGGGAGCGGCCTTGTGTCGCGATGGGCCGCAAAGCGGCCCCAAAATCTCAAAGGCTGCGCTCCTGCTCCAACCAATCCACAAACCGCTCGATCAACGCCCCACGCCGCTTGCGCGGCGGTAA > 1:17365/1‑150 ACATGGGCCGCCGTGTGCAGTCCCACTGTCGCAGCGGCCTTTTGTCGCGATGGGCCGCAAAGCGGCCCCAAAATCTCAAAGGCTGCGCTCCTGCTCCAACCAATCCACAAACCGCTCGATCAACGCCCCACGCCGCTTGCGCGGCGGTAA < 1:638169/150‑1 ATGGGCCGGCGTGTGCAGTGCCACTGTGGGAGCGGCCTTGTGTCGAGCTCACCCGCAAAGCGGCCCCAAAATCTCAAAGGCTGCGCTCCTGCTCCAACCAATCCACAAACCGCTCGATCAACGCCCCACGCCGCTTGCGCGGCGGTAgat > 1:700395/1‑147 TGGAGGGGAGTTTGCGCTCGGAACGCGGCTATTACGTAGTCTTACCGCCGCGCAAGCGGCGTGGGGCGTTGATCGAGCGGTTTGTGGATTGGTTGGAGCAGGAGCGCAGCCTTTGAGATTTTGGGGCCGCTTTGCGGCCCATCGCGACACAAGGCCGCTCCCACA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/90210‑90374‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑caaggccgctcccacaTGGGCCGGCGTGTGCAGTGCCACTGTGGGAGCGGCCTTGTGTCGCGATGGGCCGCAAAGCGGCCCCAAAATCTCAAAGGCTGCGCTCCTGCTCCAACCAATCCACAAACCGCTCGATCAACGCCCCACGCCGCTTGCGCGGCGGTAAGA < NC_002947/90397‑90249 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |