New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 = 550663787 (1.190)27 (0.480) 19/204 2.5 26.8% intergenic (+48/‑151) PP_4839/cycA iron‑regulated membrane protein/D‑alanine/beta‑alanine/D‑serine/glycine permease
?NC_002947 = 5506650 80 (1.410)intergenic (+61/‑138) PP_4839/cycA iron‑regulated membrane protein/D‑alanine/beta‑alanine/D‑serine/glycine permease

Only 100 of 136 total aligned reads displayed.

TGTTCCCGCTGGTGGGGGTGTCGATGGTGGTGATGTGGGGGGTGGATAGTTTGGTGGTGAGGCGCCGCCGGGTCTTGGCCAGCGCTTGAGCCTTGTGTTGCCTGTGCTGGCCTCTTCGCGGGTAAACCCGCTCCTACGA‑G‑GGACCGCGTTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGTACAGGCGAAATGCTGAGCCGAAAATGCAGAGTCGATCTGTCGCGCCCCGATCTGGAACGCGCGTGTTAGCCTAGCCGGCTACCTCTGACAAGAAGACTGCAGCCTATGACGCAAACC  >  NC_002947/5506501‑5506799
                                                                                                                                                       |                                                                                                                                                     
tGTTCCCGCTGGTGGGGGTGTCGATGGTGGTGATGTGGGGGGTGGATAGTTTGGTGGTGAGGCGCCGCCGGGTCTTGGCCAGCGCTTGAGCCTAGTGTTGCCTGTGCTGGCCTCTTCGCGGGTAAACCCGCTCCTACGA‑G‑GGACCGCGtt                                                                                                                                                       <  2:1200947/150‑1 (MQ=255)
  ttCCCGCTGGTGGGGGTGTCGATGGTGGTGATGTGGGGGGTGGATAGTTTGGTGGTGAGGCGCCGCCGGGTCTTGGCCAGCGCTTGAGCCTTGTGTTGCCTGTGCTGGCCTCTTCGCGGGTAAACCCGCTCCTACGA‑G‑GGACCGCGTTgt                                                                                                                                                     <  2:436258‑M2/150‑3 (MQ=255)
   tCCCGCTGGTGGGGGTGTCGATGGTGGTGATGTGGGGGGTGGATAGTTTGGTGGTGAGGCGCCGCCGGGTCTTGGCCAGCGCTTGAGCCTTGTGTTGCCTGTGCTGGCCTCTTCGCGGGTAAACCCGCTCCTACGA‑G‑GGACCGCGTTgta                                                                                                                                                    >  1:802761‑M2/1‑147 (MQ=255)
   tCCCGCTGGTGGGGGTGTCGATGGTGGTGATGTGGGGGGTGGATAGTTTGGTGGTGAGGCGCCGCCGGGTCTTGGCCAGCGCTTGAGCCTTGTGTTGCCTGTGCTGGCCTCTTCGCGGGTAAACCCGCTCCTACGA‑G‑GGACCGCGTTgta                                                                                                                                                    >  2:632895‑M2/1‑147 (MQ=255)
    ccggCTGGTGGGGGTGTCGATGGTGGTGATGGTGCGTGTGGATGGTTTGGTGGTGAGGCGCCGCCGGGTCTTGGCCAGCGCTTGAGCCTTGTGTTGCCTGTGCTGGCCTCTTCGCGGGTAAACCCGCTCCTACGA‑G‑GGACCGCGTTGTAg                                                                                                                                                   <  2:206807/147‑1 (MQ=38)
    cccGCTGGTGGGGGTGTCGATGGTGGTGATGTGGGGGGTGGATAGTTTGGTGGTGAGGCGCCGCCGGGTCTTGGCCAGCGCTTGAGCCTTGTGTTGCCTGTGCTGGCCTCTTCGCGGGTAAACCCGCTCCTACGA‑G‑GGACCGCGTTgtag                                                                                                                                                   >  2:1688671‑M2/1‑146 (MQ=255)
          ggtggGGGTGTCGATGGTGGTGATGTTGGGGGTGGATAGTTTGGTGGTGAGGCGCCGCCGGGTCTTGGCCAGCGCTTGAGCCTTGTGTTGCCTGTGCTGGCCTCTTCGCGGGTAAGCCCGCTCCTACGA‑G‑GGACCGCGTTgtaggagcgg                                                                                                                                             >  1:1071890‑M2/1‑140 (MQ=255)
          ggtggGGGTGTCGATGGTGGTGATGTGGGGGGTGGATAGTTTGGTGGTGAGGCGCCGCCGGGTCTTGGCCAGCGCTTGAGCCTTGTGTTGCCTGTGCTGGCCTCTTCGCGGGTAAACCCGCTCCTACGA‑G‑GGACCGCGTTgtaggagcgg                                                                                                                                             >  1:137643‑M2/1‑140 (MQ=255)
          ggtggGGGTGTCGATGGTGGTGATGTGGGGGGTGGATAGTTTGGTGGTGAGGCGCCGCCGGGTCTTGGCCAGCGCTTGAGCCTTGTGTTGCCTGTGCTGGCCTCTTCGCGGGTAAACCCGCTCCTACGA‑G‑GGACCGCGTTgtaggagcgg                                                                                                                                             >  1:1561233‑M2/1‑140 (MQ=255)
              ggggTGTCGATGTTGGTGATCTGGGGGGTTGATAGTTTGGTGGTGAGGCGCCGCCGGGTCTTGGCCAGCGCTTGAGCCTTGTGTTGCCTGTGCTGGCCTCTTCGCGGGTAAACCCGCTCCTACGA‑G‑GGACCGCGTTgtaggagcgggttt                                                                                                                                         >  1:111052‑M2/1‑136 (MQ=255)
               gggTGTCGATGGTGGTGATGTGGGGGGTGGATAGTTTGGTGGTGAGGCGCCGCCGGGTCTTGGCCAGCGCTTGAGCCTTGTGTTGCCTGTGCTGGCCTCTTCGCGGGTAAACCCGCTCCTACGA‑G‑GGACCGCGTTgtaggagcgggttta                                                                                                                                        <  1:1051159‑M2/150‑16 (MQ=255)
                 gggtggATGGTGGTGATGTGGGGGGTGGATAGTTTGGTGGTGAGGCGCCGCCGGGTCTTGGCCAGCGCTTGAGCCTTGTGTTGCCTGTGCTGGCCTCTTCGCGGGTAAACCCGCTCCTACGA‑G‑GGACCGCGTTGTAGGAGCGGGTTTAcc                                                                                                                                      <  1:58770/145‑1 (MQ=255)
                   gtCGATGGTGGTGATGTGGGGGGTGGATAGTTTGGTGGTGAGGCGCCGCCGGGTCTTGGCCAGCGCTTGAGCCTTGTGTTGCCTGTGCTGGCCTCTTCGCGGGTAAACCAGCTCCTACGA‑G‑GGACCGCGTTgtaggagcgg                                                                                                                                             >  2:241592‑M2/1‑131 (MQ=255)
                           tggtgATGTGGGGGGTGGATAGTTTGGTGGTGAGGCGCCGCCGGGTCTTGGCCAGCGCTTGAGCCTTGTGTTGCCTGTGCTGGCCTCTTCGCGGGTAAACCCGCTCCTACGA‑G‑GGACCGCGTTgtagga                                                                                                                                                 <  1:239089‑M2/129‑7 (MQ=255)
                            ggggATGTGGGGGGTGGATAGTTTGGTGGTGCGGCGCCGCCGGGTCTTGGCCAGCGCTTGAGCCTTGTGTTGCCTGTGCTGGCCTCTTCGCGGGTAAACCCGCTCCTACGA‑G‑GGACCGCGTTGTAGGAGCGGGTTTACCCGCGAAGAGGc                                                                                                                           <  1:1454524/147‑1 (MQ=255)
                             gtgATGTGGGGGGTGGATAGTTTGGTGGTGAGGCGCCGCCGGGTCTTGGCCAGCGCTTGAGCCTTGTGTTGCCTGTGCTGGCCTCTTCGCGGGTAAACCCGCTCCTACGA‑G‑GGACCGCGTTgtaggagcgggtttacccgcgaagaggcc                                                                                                                          <  2:1667041‑M2/150‑30 (MQ=255)
                              tgATGTGGGGGGTGGATAGTTTGGTGGTGAGGCGCCGCCGGGTCTTGGCCAGCGCTTGAGCCTTGTGTTGCCTGTGCTGGCCTCTTCGCGGGTAAACCCGCTCCTACGA‑G‑GGACCGCGTTGTAGGAGCGGGTTTACCCGCGAAGAGGCCg                                                                                                                         <  2:1444496/150‑1 (MQ=255)
                                aTGTGGGGGGTGGATAGTTTGGTGGTGAGGCGCCGCCGGGTCTTGGCCAGCGCTTGAGCCTTGTGTTGCCTGTGCTGGCCTCTTCGCGGGTAAACCCGCTCCTACGA‑G‑GGACCGCGTTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGt                                                                                                                       >  2:326369/1‑150 (MQ=255)
                                aTGTGGGGGGTGGATAGTTTGGTGGTGAGGCGCCGCCGGGTCTTGGCCAGCGCTTGAGCCTTGTGTTGCCTGTGCTGGCCTCTTCGCGGGTAAACCCGCTCCTACGA‑G‑GGACCGCGTTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGt                                                                                                                       <  2:34286/150‑1 (MQ=255)
                                     gggggTGGATAGTTTGGTGGTGAGGCGCCGCCGGGTCTTGGCCAGCGCTTGAGCCTTGTGTTGCCTGTGCTGGCCTCTTCGCGGGTAAACCCGCTCCTACGA‑G‑GGACCGCGTTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGTACAgg                                                                                                                  >  1:70193/1‑150 (MQ=255)
                                     gggggTGGATAGTTTGGTGGTGAGGCGCCGCCGGGTCTTGGCCAGCGCTTGAGCCTTGTGTTGCCTGTGCTGGCCTCTTCGCCGGTAGACCCGCTCCTACGA‑G‑GGAGCCCGTGGTAGGAGCGGGTTTACCCGGGAAGAGGCCGGTACAgg                                                                                                                  >  2:138577/1‑150 (MQ=38)
                                          tGGATAGTTTGGTGGTGAGGCGCCGCCGGGTCTTGGCCAGCGCTTGAGCCTTGTGTTGCCTGTGCTGGCCTCTTCGCGGGTAAACCCGCTCCTACGA‑G‑GGACCGCGTTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGTACAGGCGaaa                                                                                                             >  1:1467992/1‑150 (MQ=255)
                                           ggATAGTTTGGTGGTGAGGCGCCGCCGGGTCTTGGCCAGCGCTTGAGCCTTGTGTTGCCTGTGCTGGCCTCTTCGCGGGTAAACCCGCTCCTACGA‑G‑GGACCGCGTTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGTACAGGCGAAAt                                                                                                            >  2:690201/1‑150 (MQ=255)
                                               aGTTTGGTGGTGAGGCGCCGCCGGGTCTTGGCCAGCGCTTGAGCCTTGTGTTGCCTGTGCTGGCCTCTTCGAGGGTAAACCCGCTCCTACGA‑G‑TGACCGCGTTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGTACAGGCGAAATGCTg                                                                                                        <  1:690201/150‑1 (MQ=255)
                                                gTTTGGTGGTGAGGCGCCGCCGGGTCTTGGCCAGCGCTTGAGCCTTGTGTTGCCTGTGCTGGCCTCTTCGCGGGTAAACCCGCTCCTACGA‑G‑GGACCGCGTTgtaggagcgggtttacccgcgaaga                                                                                                                              <  2:539920‑M2/127‑26 (MQ=255)
                                                   tggtggTGAGGCGCCGCCGGGTCTTGGCCAGCGCTTGAGCCTTGTGTTGCCTGTGCTGGCCTCTTCGCGGGTAAACCCGCTCCTACGA‑G‑GGACCGCGTTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGTACAGGCGAAATGCTGAGcc                                                                                                    <  1:365683/150‑1 (MQ=255)
                                                        gtgAGGCGCCGCCGGGTCTTGGCCAGCGCTTGAGCCTTGTGTTGCCTGTGCTGGCCTCTTCGCGGGTAAACCCGCTCCTACGA‑G‑GGACCGCGTTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGTACAGGCGAAATGCTGAGCCGaaaa                                                                                               <  1:436258/150‑1 (MQ=255)
                                                          gAGGCGCCGCCGGGTCTTGGCCAGCGCTTGAGCCTTGTGTTGCCTGTGCTGGCCTCTTCGCGGGTAAACCCGCTCCTACAACGCGGTCC‑C‑TCgtaggagcgggtttacccgcgaagag                                                                                                                             >  1:550588‑M2/1‑92 (MQ=255)
                                                          gAGGCGCCGCCGGGTCTTGGCCAGCGCTTGAGCCTTGTGTTGCCTGTGCTGGCCTCTTCGCGGGTAAACCCGCTCCTACAACGCGGTCC‑C‑TCgtaggagcgggtttacccgcgaagag                                                                                                                             <  2:550588‑M2/118‑27 (MQ=255)
                                                                 cgccgGGTCTTGGCCAGCGCTTGAGCCTTGTGTTGCCTGTGCTGGCCTCTTCGCGGGTAAACCCGCTCCTACGA‑G‑GGACCGCGTTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGTACAGGCGAAATGCTGAGCCGAAAATGCAGAGTc                                                                                      <  2:1422143/150‑1 (MQ=255)
                                                                  gccgGGTCTTGGCCAGCGCTTGAGCCTTGTGTTGCCTGTGCTGGCCTCTTCGCGGGTAAACCCGCTCCTACGA‑G‑GGACCGCGTTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGTACAGGCGAAATGCTGAGCCGAAAATGCAGAGTCg                                                                                     >  1:1385468/1‑150 (MQ=255)
                                                                    cgGGTCTTGGCCAGCGCTTGAGCCTTGTGTTGCCTGTGCTGGCCTCTTCGCGGGTAAACCCGCTCCTACGA‑G‑GGACCGCGTTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGTACAGGCGAAATGCTGAGCCGAAAATGCAGAGTCGAt                                                                                   <  1:1287258/150‑1 (MQ=255)
                                                                     tggTCTGGGCCAGCGCTCGTGCTTTGTGTTGCCTGTGCTGGCCTCTTCGCGGCGATGCCCGCGCCTACGA‑G‑GGCGCGCGTGGTAGGAGCGGGTTTCCCCGCGAAGAGGCCGGTACAGGCGAAATGCTGAGCCGAAAATGCAGAGTCGATc                                                                                  <  2:1818891/149‑1 (MQ=25)
                                                                     gggTCTTGGCCAGCGCTTGAGCCTTGTGTGGCCTGTGCTGGCCTCTTCGCGGGTAAACCCGCTCCTACGA‑G‑GGACCGCGTTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGTACAGGCGAAATGCTGAGCCGAAAATGCAGAGTCGATc                                                                                  <  1:524870/150‑1 (MQ=255)
                                                                        tCTTGGCCAGCGCTTGAGCCTTGTGTTGCCTGTGCTGGCCTCTTCGCGGGTAAACCCGCTCCTACGA‑G‑GGACCGCGTTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGTACAGGCGAAATGCTGAGCCGAAAATGCAGAGTCGATCTGt                                                                               >  1:1550745/1‑150 (MQ=255)
                                                                         cTTGGCCAGCGCTTGAGCCTTGTGTTGCCTGTGCTGGCCTCTTCGCGGGTAAACCCGCTCCTACGA‑G‑GGACCGCGTTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGTACAGGCGAAATGCTGAGCCGAAAATGCAGAGTCGATCTGTc                                                                              <  1:326369/150‑1 (MQ=255)
                                                                         cTTGGCCAGCGCTTGAGCCTTGTGTTGCCTGTGCTGGCCTCTTCGCGGGTAAACCCGCTCCTACGA‑G‑GGACCGCGTTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGTACAGGCGAAATGCTGAGCCGAAAATGCAGAGTCGATCTGTc                                                                              <  1:1297838/150‑1 (MQ=255)
                                                                           tGGCCAGCGCTTGAGCCTTGTGTTGCCTGTGCTGGCCTCTTCGCGGGTAAACCCGCTCCTACGA‑G‑GGACCGCGTTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGTACAGGCGAAATGCTGAGCCGAAAATGCAGAGTCGATCTGTcgc                                                                            <  2:1467992/150‑1 (MQ=255)
                                                                            ggCCAGCGCTTGAGCCTTGTGTTGCCTGTGCTGGCCTCTTCGCGGGTAAACCCGCTCCTACGA‑G‑GGACCGCGtt                                                                                                                                                       <  1:1787441/74‑1 (MQ=255)
                                                                               cAGCGCTTGAGCCTTGTGTTGCCTGTGCTGGCCTCTTCGCGGGTAAACCCGCTCCTACGA‑G‑GGACCGCGTTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGTACAGGCGAAATGCTGAGCCGAAAATGCAGAGTCGATCTGTCGCGccc                                                                        >  2:194016/1‑150 (MQ=255)
                                                                                   gcTTGAGCCTTGTGTTGCCTGTGCTGGCCTCTTCGCGGGTAAACCCGCTCCTACGA‑G‑GGACCGCGTTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGTACAGGCGAAATGCTGAGCCGAAAATGCAGAGTCGATCTGTCGCGCCCCGAt                                                                    >  1:1467313/1‑150 (MQ=255)
                                                                                     ttGAGCCTTGTGTTGCCTGTGCTGGCCTCTTCGCGGGTAAACCCGCTCCTACGA‑G‑GGACCGCGTTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGTACAGGCGAAATGCTGAGCCGAAAATGCAGAGTCGATCTGTCGCGCCCCGATCt                                                                  >  1:500097/1‑150 (MQ=255)
                                                                                     ttGAGCCTTGTGTTGCCTGTGCTGGCCTCTTCGCGGGTAAACCCGCTCCTACGA‑G‑GGACCGCGTTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGTACAGGAGAAATGCTGAGCCGAAAATGCAGAGTCGATCTGTCGCGCCCCGATCt                                                                  <  1:138577/150‑1 (MQ=255)
                                                                                       gAGCCTTGTGTTGCCTGTGCTGGCCTCTTCGCGGGTAAACCCGCTCCTCCCA‑G‑GCGCCGGGTTGTAGGAGCGGGGTTACCCGCGAAGAGGCCGGTACAGGCGAAATGCTGAGCCGAAAATGCAGAGTCGATCTGTCGTGCCCCGATCTgg                                                                >  2:1372771/1‑150 (MQ=37)
                                                                                       gAGCCTTGTGTTGCCTGTGCTGGCCTCTTCGCGGGTAAACCCGCTCCTACGA‑G‑GGACCGCGTTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGTACAgg                                                                                                                  >  1:318639/1‑100 (MQ=255)
                                                                                       gAGCCTTGTGTTGCCTGTGCTGGCCTCTTCGCGGGTAAACCCGCTCCTACGA‑G‑GGACCGCGTTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGTACAGGCGAAATGCTGAGCCGAAAATGCAGAGTCGATCTGTCGCGCCCCGATCTgg                                                                <  2:1550745/150‑1 (MQ=255)
                                                                                         gCCTTGTGTTGCCTGTGCTGGCCTCTTCGCGGGTAAACCCGCTCCTACGA‑G‑GGACCGCGTTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGTACAGGCGAAATGCTGAGCCGAAAATGCAGAGTCGATCTGTCGCGCCCCGATCTGGaa                                                              <  1:194016/150‑1 (MQ=255)
                                                                                          ccTTGTGTTGCCTGTGCTGGCCTCTTCGCGGGTAAACCCGCTCCTACGA‑G‑GGACAGCGTTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGTACAGGCGAAATGCTGAGCCGAAAATGCAGAGTCGATCTGt                                                                               >  2:381161/1‑132 (MQ=255)
                                                                                          ccTTGTGTTGCCTGTGCTGGCCTCTTCGCGGGTAAACCCGCTCCTACGA‑G‑GGACAGCGTTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGTACAGGCGAAATGCTGAGCCGAAAATGCAGAGTCGATCTGt                                                                               <  1:381161/132‑1 (MQ=255)
                                                                                            ttGTGTTGCCTGTGCTGGCCTCTTCGCGGGTAAACCCGCTCCTACGA‑G‑GGACCGCGTTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGTACAGGCGAAATGCTGAGCCGAAAATGCAGAGTCGATCTGTCGCGCCCCGATCTGGAAcgc                                                           >  1:176843/1‑150 (MQ=255)
                                                                                               tgtTGCCTGTGCTGGCCTCTTCGCGGGTAAACCCGCTCCTACGA‑G‑GGACCGCGTTGTAGGAGCGGGTTTACCCGCGAAGAGGCCg                                                                                                                         >  2:375036/1‑85 (MQ=255)
                                                                                               tgtTGCCTGTGCTGGCCTCTTCGCGGGTAAACCCGCTCCTACGA‑G‑GGACCGCGTTGTAGGAGCGGGTTTACCCGCGAAGAGGCCg                                                                                                                         <  1:1198441/85‑1 (MQ=255)
                                                                                               tgtTGCCTGTGCTGGCCTCTTCGCGGGTAAACCCGCTCCTACGA‑G‑GGACCGCGTTGTAGGAGCGGGTTTACCCGCGAAGAGGCCg                                                                                                                         >  2:1198441/1‑85 (MQ=255)
                                                                                                gtTGCCTGTGCTGGCCTCTTCGCGGGTAAACCCGCTCCTACGA‑G‑GGACCGCGTTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGTACAGGCGAAATGCTGAGCCGAAAATGCAGAGTCGATCTGTCGCGCCCCGATCTGGAACGCGCgt                                                       <  2:1051159/150‑1 (MQ=255)
                                                                                                gtTGCCTGTGCTGGCCTCTTCGCGGGTAAACCCGCTCCTACGA‑G‑GGACCGCGTTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGTACAGGCGAAATGCTGAGCCGAAAATGCAGAGTCGATCTGTCGCGCCCCGATCTGGAACGCGCgt                                                       <  2:1385468/150‑1 (MQ=255)
                                                                                                   gCCTGTGCTGGCCTCTTCGCGGGTAAACCCGCTCCTACGA‑G‑GGACCGCGTTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGTACAGGCGAAATGCTGAGCCCAAAATGCAGAGTCGATCTGTCGCGCCCCGATCTGGAGCGAGCgtggt                                                    >  2:599790/1‑148 (MQ=255)
                                                                                                      tgtgCTGGCCTCTTCGCGGGTAAACCCGCTCCTACGA‑G‑GGACCGCGTTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCGAAATGCTGAGCCGAAAATGCAGAGTCGATCTGt                                                                               <  2:1688208/120‑1 (MQ=255)
                                                                                                           tGGCCTCTTCGCGGGTAAACCCGCTCCTACGA‑G‑GGACCGCGTTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGTACAGGCGAAATGCt                                                                                                         >  2:116677/1‑89 (MQ=255)
                                                                                                           tGGCCTCTTCGCGGGTAAACCCGCTCCTACGA‑G‑GGACCGCGTTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGTACAGGCGAAATGCt                                                                                                         <  1:116677/89‑1 (MQ=255)
                                                                                                           tGGCCTCTTCGCGGGTAAACCCGCTCCTACGA‑G‑GGACCGCGTTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGTACAGGCGAAATGCTGAGCCGAAAATGCAGAGTCGATCTGTCGCGCCCCGATCTGGAACGCGCGTGTtagcctagc                                            <  1:307601/150‑1 (MQ=255)
                                                                                                           tGGCCTCTTCGCGGGTAAACCCGCTCCTACGA‑G‑GGACCGCGTTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGTACAGGCGAAATGCTGAGCCGAAAATGCAGAGTCGATCTGTCGCGCCCCGATCTGGAACGCGCGTGTtagcctagc                                            >  2:307601/1‑150 (MQ=255)
                                                                                                            ggCCTCTTCGCGGGTAAACCCGCTCCTACGA‑G‑GGACCGCGTTgtaggagcgggtttacccgcgaagaggccagcacaggcaacacaaggctcaagcgctggccaaga                                                                                      <  2:1591363‑M2/107‑66 (MQ=255)
                                                                                                            ggCCTCTTCGCGGGTAAACCCGCTCCTACGA‑G‑GGACCGCGTTgtaggagcgggtttacccgcgaagaggccagcacaggcaacacaaggctcaagcgctggccaaga                                                                                      >  1:1591363‑M2/1‑42 (MQ=255)
                                                                                                             gCCTCTTCGCGGGTAAACCCGCTCCTACGA‑G‑GGACCGCGTTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGTACAGGCGAAATGCt                                                                                                         >  1:378733/1‑87 (MQ=255)
                                                                                                             gCCTCTTCGCGGGTAAACCCGCTCCTACGA‑G‑GGACCGCGTTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGTACAGGCGAAATGCTGAGCCGAAAATGCAGAGTCGATCTGTCGCGCCCCGATCTgg                                                                <  2:512414/128‑1 (MQ=255)
                                                                                                              ccTCTGCGTGGTTATACCCGCTCCGACGA‑G‑GGGCGGGGTGTTAGGAGCGGGTGTACCCGCGAAGAGGCCGGTACAGGCGAAATGCTGAGCCGAAAATGCAGAGTCGATCTGTCGCGCCCCGATCTGGAACGCGCGTGTTAGCCTAGCCgg                                         <  1:532344/150‑1 (MQ=255)
                                                                                                               ctctTCGCGGGTAAACCCGCTCCTACGA‑G‑GGACCGCGTTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGTACAGGCGAAATGCTGAGCCGAAAATGCAGAGTCGATCTGTCGCGCCCCGATCTGGAACGCGCGTGTTAGCCTAGCCGGc                                        >  1:1442891/1‑150 (MQ=255)
                                                                                                               ctctTCGCGGGTAAACCCGCTCCTACGA‑G‑GGACCGCGCTGTCGGAGCGTGTTTACCCGCGAGGAGGCCGGTACAGGCGAAATGCTTAGCCGAAAATGCAGGGTCCCACTGTCCCGCCCCGAGCAGGAACCCGCGTGGTCGCCTTGACGGc                                        >  2:400107/1‑150 (MQ=25)
                                                                                                                  ttCGCGGGTAAACCCGCTCCTACGA‑G‑GGACCGCGTTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGTACAGGCGAAATGCTGAGCCGAAAATGCAGAGTCGATCTGTCGCGCCCCGATCTGGAACGCGCGTGTTAGCCTAGCCGGCTAc                                     >  2:1276276/1‑150 (MQ=255)
                                                                                                                    cgcgGGTAAACCCGCTCCTACGA‑G‑GGACCGCGTTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGTACAGGCGAAATGCTGAGCCGAAAATGCAGAGTCGATCTGTCGCGCCCCGATCTGGAACGCGCGTGTTAGCCTAGCCGGCTACct                                   <  2:1467313/150‑1 (MQ=255)
                                                                                                                       gggTAAACCCGCTCCTACGA‑G‑GGACCGCGTTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGTACAGGCGAAATGCTGAGCCGAAAATGCAGAGTCGATCTGTCGCGCCCCGATCTGGAACGCGCGTGTTAGCCTAGCCGGCTACCTCTg                                >  2:1726005/1‑150 (MQ=255)
                                                                                                                         gTAAACCCGCTCCTACGA‑G‑GGACCGCGTTgtaggagcgggtttacccgcgaagaggccagcacaggcaacacaaggctcaagcgctggccaagacccggcggcgcctcaccaccaaactatccaccccccacatcaccaccatcgacacc                              >  1:1204816‑M2/1‑29 (MQ=255)
                                                                                                                         gTAAACCCGCTCCTACGA‑G‑GGACCGCGTTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGTACAGGCGAAATGCTGAGCCGaaa                                                                                                >  1:761542/1‑84 (MQ=255)
                                                                                                                         gTAAACCCGCTCCTACGA‑G‑GGACCGCGTTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGTACAGGCGAAATGCTGAGCCGaaa                                                                                                <  2:761542/84‑1 (MQ=255)
                                                                                                                         gTAAACCCGCTCCTACGA‑G‑GGACCGCGTTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGTACAGGCGAAATGCTGAGCCGAAAATg                                                                                             >  2:731262/1‑87 (MQ=255)
                                                                                                                           aaaCCCGCTCCTACGA‑G‑GGACCGCGTTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGTACAGGCGAAATGCTGAGCCGAAAATGCAGAGTCGATCTGTCGCGCCCCGATCTGGAACGCGCGTGTTAGCCTAGCCGGCTACCTCTGACaa                            >  1:409357/1‑150 (MQ=255)
                                                                                                                             aCCCGCTCCTACGA‑G‑GGACCGCGTTgtaggagcgggtttacccgcgaagaggccagcacaggcaacacaaggctcaagcgctggccaagacccggcggcgcctcaccaccaaactatccaccccccacatcaccaccatcgacacccgcc                          <  1:732712‑M2/150‑126 (MQ=255)
                                                                                                                              cccGCTCCTACGA‑G‑GGACCGCGTTgtaggagcgggtttacccgcgaagaggccagcacaggcaacacaaggctcaagcgctggccaagacccggcggcgcctcaccaccaaactatccaccccccacatcaccaccatcgacacccccac                         <  1:463580‑M2/150‑127 (MQ=255)
                                                                                                                              cccGCTCCTACGA‑G‑GGACCGCGTTgtaggagcgggtttacccgcgaagaggccagcacaggcaacacaaggctcaagcgctggccaagacccggcggcgcctcaccaccaaactatccaccccccacatcaccaccatcgacac                               >  2:963511‑M2/1‑24 (MQ=255)
                                                                                                                              cccGCTCCTACGA‑G‑GGACCGCGTTgtaggagcgggtttacccgcgaagaggccagcacaggcaacacaaggctcaagcgctggccaagacccggcggcgcctcaccaccaaactatccaccccccacatcaccaccatcgacac                               <  1:963511‑M2/144‑121 (MQ=255)
                                                                                                                              cccGCTCCTACGA‑G‑GGACCGCGTTgtaggagcgggtttacccgcgaagaggccagcacaggcaacacaaggctcaagcgctggccaa                                                                                        >  1:287428‑M2/1‑24 (MQ=255)
                                                                                                                              cccGCTCCTACGA‑G‑GGACCGCGTTgtaggagcgggtttacccgcgaagaggccagcacaggcaacacaaggctcaagcgctggccaa                                                                                        <  2:287428‑M2/87‑64 (MQ=255)
                                                                                                                              cccGCTCCTACGA‑G‑GGACCGCGTTgtaggagcgggtttacccgcgaagaggccagcacaggcaacacaaggctcaagcgctgg                                                                                            >  1:545807‑M2/1‑24 (MQ=255)
                                                                                                                               ccGCTCCTACGA‑G‑GGACCGCGTTgtaggagcgggtttcccgccgacgcgattaccttaggcaacacaaggcgcaagcgctggccaagacccggcggcgcctcaccaccaaactatccaccccccacatcaccaccatcgacacccccacc                        <  1:35094‑M2/150‑128 (MQ=255)
                                                                                                                               ccGCTCCTACGA‑G‑GGACCGCGTTgtaggagcgggtttacccgcgaagaggccagcacaggcaacacaaggctcaagcgctggccaagacccggcggcgcctcaccaccaaactatccaccccccacatcaccaccatcgccacccccacc                        <  2:578298‑M2/150‑128 (MQ=255)
                                                                                                                               ccGCTCCTACGA‑G‑GGACCGCGTTgtaggagcgggtttacccgcgaagaggccagcacaggcaacacaaggctcaagcgctggccaagacccggcggcgcctcaccaccaaactatccaccccccacatcaccaccatcgacgcccccacc                        <  2:1689127‑M2/150‑128 (MQ=255)
                                                                                                                               ccGCTCCTACGA‑G‑GGACCGCGTTgtaggagcgggtttacccgcgaagaggccagcacaggcaacacaaggctcaagcgctggccaagacccggcggcgcctcaccaccaaactatccaccccccacatcaccaccatcgacacccccacc                        <  2:1427421‑M2/150‑128 (MQ=255)
                                                                                                                               ccGCTCCTACGA‑G‑GGACCGCGTTgtaggagcgggtttacccgcgaagaggccagcacaggcaacacaaggctcaagcgctggccaagacccggcggcgcctcaccaccaaactatccaccccccacatcaccaccatcgacacccccacc                        <  2:1299011‑M2/150‑128 (MQ=255)
                                                                                                                               ccGCTCCTACGA‑G‑GGACCGCGTTgtaggagcgggtttacccgcgaagaggccagcacaggcaacacaaggctcaagcgctggccaagacccggcggcgcctcaccaccaaactatccaccccccacatcaccaccatcgacacccccacc                        <  2:683073‑M2/150‑128 (MQ=255)
                                                                                                                                  cTCCTACGA‑G‑GGACCGCGTTgtaggagcgggtttacccgcgaagaggccagcacaggcaacacaaggctcaagcgctggccaagacccggcggcgcctcccccccaaactatcccccccccacatcaccaccatcgacacccccaccagc                     >  1:1427421‑M2/1‑20 (MQ=255)
                                                                                                                                   tCCTACGA‑G‑GGACCGCGTTgtaggagcgggtttacccgggaagaggccagcacaggcaacacaaggctcaagcgctggccaagacccggcggcgcctcaccaccaaactatccaccccccacatcaccaccatcgacacccccaccagcg                    <  2:1070723‑M2/150‑132 (MQ=255)
                                                                                                                                     cTACGA‑G‑GGACCGCGTTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGTACAGGCGAAATGCTGAGCCGAAAATGCAGAGTCGATCTGTCGCGCCCCGATCTGGAACGCGCGTGTTAGCCTAGCCGGCTACCTCTGACAAGAAGACTGCa                  >  2:1399456/1‑150 (MQ=255)
                                                                                                                                       aCGA‑G‑GGACCGCGTTgtaggagcgggtttacccgcgaagaggccagcacaggcaacacaaggctcaagcgctggccaagacccggcggcgcctcaccac                                                                   <  1:1750256‑M2/99‑85 (MQ=255)
                                                                                                                                       aCGA‑G‑GGACCGCGTTgtaggagcgggtttacccgcgaagaggccagcacaggcaacacaaggctcaagcgctggccaagacccggcggcgcctcaccac                                                                   >  2:1750256‑M2/1‑15 (MQ=255)
                                                                                                                                         gA‑G‑GGACCGCGTTgtaggagcgggtttacccgcgaagaggccagcacaggcaacacaaggctcaagcgctggccaagacccggcggcgcctcaccaccaaactatccaccccccacatcaccaccatcgacacccccaccagcgggaaca              <  1:987416‑M2/150‑138 (MQ=255)
                                                                                                                                                aCCGCGTTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGTACAGGCGAAATGCTGAGCCGAAAATGCAGAGTCGATCTGTCGCGCCCCGATCTGGAACGCGCGTGTTAGCCTAGCCGGCTACCTCTGACAAGAAGACTGCAGCCTATGAc         <  1:1249118/150‑1 (MQ=255)
                                                                                                                                                   gcgTTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGTACAGGCGAAATGCTGAGCCGAAAATGCAGAGTCGATCTGTCGCGCCCCGATCTGGAACGCGCGTGTTAGCCTAGCCGGCTACCTCTGACAAGAAGACTGCAGCCt              <  1:71370/142‑1 (MQ=255)
                                                                                                                                                     gTTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGTACAGGCGAAATGCTGAGCCGAAAATGCAGAGTCGATCTGTCGCGCCCCGATCTGGAACGCGCGTGTtagc                                                 >  2:934049/1‑105 (MQ=255)
                                                                                                                                                     gTTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGTACAGGCGAAATGCTGAGCCGAAAATGCAGAGTCGATCTGTCGCGCCCCGATCTGGAACGCGCGTGTtagc                                                 <  1:934049/105‑1 (MQ=255)
                                                                                                                                                       tgtaggagcgggtttacccgcgaagaggccagcacaggcaacacaaggctcaagcgctggccaagacccggcggcgcctcaccaccaaactatccaccccccgcatcaccaccaaccacacccccaccagcgggaacctcacccccagcc  <  2:842470‑M2/150‑150 (MQ=255)
                                                                                                                                                       |                                                                                                                                                     
TGTTCCCGCTGGTGGGGGTGTCGATGGTGGTGATGTGGGGGGTGGATAGTTTGGTGGTGAGGCGCCGCCGGGTCTTGGCCAGCGCTTGAGCCTTGTGTTGCCTGTGCTGGCCTCTTCGCGGGTAAACCCGCTCCTACGA‑G‑GGACCGCGTTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGTACAGGCGAAATGCTGAGCCGAAAATGCAGAGTCGATCTGTCGCGCCCCGATCTGGAACGCGCGTGTTAGCCTAGCCGGCTACCTCTGACAAGAAGACTGCAGCCTATGACGCAAACC  >  NC_002947/5506501‑5506799

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.