| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 5,845,658 | Δ1 bp | 9.8% | intergenic (+27/‑75) | coaD → / → yfhL | phosphopantetheine adenylyltransferase/4Fe‑4S cluster‑containing protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 5,845,658 | 0 | T | . | 9.8% | 324.0 / 31.3 | 112 | intergenic (+27/‑75) | coaD/yfhL | phosphopantetheine adenylyltransferase/4Fe‑4S cluster‑containing protein |
| Reads supporting (aligned to +/- strand): ref base T (49/52); new base . (6/5); total (55/57) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 7.59e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 5.33e-01 | |||||||||||
Only 100 of 112 total aligned reads displayed.
TTATTCGTTCATTTCCTCGACCCTGGTCCGGGAGATTGCAGCGCTGGGCGGTGATATCAGCAAGTTCGTCCACCCGGTGGTGGCCGACGCACTGACTGAACGCTTCAAGAAGCAAGCCTGACGCCTGATTGTCGCGCCCGC‑GTGCACTGCGGGCGCGAATGCGGCACAATTGTGCCCATTGCGTTGAACATGCCCGGGCTGTGAGCCCCGGCCGGAGTCCCCATGTCCCTGATCATCACCGACGATTGCATCAATTGCGACGTCTGCGAACCCGAGTGCCCGAACGAGG > NC_002947/5845511‑5845799 | ttATTCGTTCATTTCCTCGACCCTGGTCCGGGAGATTGCAGCGCTGGGCGGTGATATCAGCAAGTTCGTCCACCCGGTGGTGGCCGACGCACTGACTGAACGCTTCAAGAAGCAAGCCTGACGCCTGATTGTCGCGCCCGC‑GTGCACTGc < 1:1129528/150‑1 (MQ=255) aTTCGTTCATGTCCCCTACCCTGGTTCGGGAGATTGCAGCACTGGGCTGTGATATGAGCAGGTTCGTGCACCCGGTGGTGGCCGACGCCCGGACTGAACGCTTCAAGTAGCAAGGCTGACGCCTGATTGTCGCGCCCGC‑GTGCACTGCgg < 2:1237260/150‑1 (MQ=255) ttCGTTCATTTCCTCGACCCTGGTCCGGGAGATTGCAGCGCTGGGCGGTGATATCAGCAAGTTCGTCCACCCGGTGGTGGCCGACGCACTGACTGAACGATTAAAGAAGCAAGCCTGACGCCTGATTGTCGCGCCCGC‑GTGCACTGCggg < 2:2500100/150‑1 (MQ=255) gTTCATTTCCTCGACCCTGGTCCGGGAGATTGCAGCGCTGGGCGGTGATATCAGCAAGTTCGTCCACCCGGTGGTGGCCGACGCACTGACTGAACGCTTCAAGAAGCAAGCCTGACGCCTGATTGTCGCGCCCGC‑GTGCACTGCGGgcgc > 1:283307/1‑150 (MQ=255) gTTCATTTCCTCGACCCTGGTCCGGGAGATTGCAGCGCTGGGCGGTGATATCAGCAAGTTCGTCCACCCGGTGGTGGCCGACGCACTGACTGAACGCTTCAAGAAGCAAGCCTGACGCCTGATTGTCGCGCCCGC‑GTGCACTGCGGgcgc > 1:1557237/1‑150 (MQ=255) ttCATTTCCTCGACCCTGGTCCGGGAGATTGCAGCGCTGGGCGGTGATATCAGCAAGTTCGTCCACCCGGTGGTGGCCGACGCACTGACTGAACGCTTCAAGAAGCAAGCCTGACGCCTGATTGTCGCGCCCGC‑GTGCACTGCGGGcgcg > 2:2844389/1‑150 (MQ=255) aTTTCCTCGACCCTGGTCCGGGAGATTGCAGCGCTGGGCGGTGATATCAGCAAGTTCGTCCACCCGGTGGTGGCCGACGCACTGACTGAACGCTTCAAGAAGCAAGCCTGACGCCTGATTGTCGCGCCCGC‑GTGCACTGCGGGCGCGAAt < 1:413541/150‑1 (MQ=255) aTTTCCTCGACCCTGGTCCGGGAGATTGCAGCGCTGGGCGGTGATATCAGCAAGTTCGTCCACCCGGTGGTGGCCGACGCACTGACTGAACGCTTCAAGAAGCAAGCCTGACGCCTGATTGTCGCGCCCGC‑GTGCACTGCGGGCGCGAAt < 1:413643/150‑1 (MQ=255) aTTTCCTCGACCCTGGTCCGGGAGATTGCAGCGCTGGGCGGTGATATCAGCAAGTTCGTCCACCCGGTGGTGGCCGACGCACTGACTGAACGCTACAAGAAGCAAGCCTGACGCCTGATTGTCGCGCCCGC‑GTGGACTAGGGGCGCGAAt > 2:3018273/1‑150 (MQ=255) tttCCTCGACCCTGGTCCGGGAGATTGCAGCGCTGGGCGGTGATATCAGCAAGTTCGTCCACCCGGTGGTGGCCGACGCACTGACTGAACGCTTCAAGAAGCAAGCCTGGCGCCTGATTGTCGCGCCCGG‑GTGCACTGCGGGCGCGAATg > 1:158266/1‑150 (MQ=255) tttCCTCGACCCTGGTCCGGGAGATTGCAGCGCTGGGCGGTGATATCAGCAAGTTCGTCCACCCGGTGGTGGCCGACGCACTGACTGAACGCTTCAAGAAGCAAGCCTGACGCCTGATTGTCGCGCCCGC‑GTGCACTGCGGGCGCGAATg > 1:3027580/1‑150 (MQ=255) ttCCTCGACCCTGGTCCGGGAGATTGCAGCGCTGGGCGGTGATATCAGCAAGTTCGTCCACCCGGTGGTGGCCGACGCACTGACTGAACGCTTCAAGAAGCAAGCCTGACGCCTGATTGTCGCGCCCGC‑GTGCACTGCGGGCGCGAATgg < 2:864321/150‑2 (MQ=255) ccTGGTCCGGGAGATTGCAGCGCTGGGCGGTGATATCAGCTAGTTCGTCCACCCGGTGGTGGCCGACGCACTGACTGAACGCTTCAAGAAGCAAGCATGACGCCTGATTGTCGCGCCCGC‑GTGCACTGCGGGCGCGAATGCGGCACAAtt > 1:2929866/1‑150 (MQ=255) tCCGGGAGATTGCAGCGCTGGGCGGTGATATCAGCAAGTTCGTCCACCCGGTGGTGGCCGACGCACTGACTGAACGCTTCAAGAAGCAAGCCTGACGCCTGATTGTCGCGCCCGC‑GTGCACTGCGGGCGCGAATGCGGCACAATtgtg < 1:607413/148‑1 (MQ=255) tCCGGGAGATTGCAGCGCTGGGCGGTGATATCAGCAAGTTCGTCCACCCGGTGGTGGCCGACGCACTGACTGAACGCTTCAAGAAGCAAGCCTGACGCCTGATTGTCGCGCCCGC‑GTGCACTGCGGGCGCGAATGCGGCACAATtgtg > 2:607413/1‑148 (MQ=255) gggAGATTGCAGCGCTGGGCGGTGATATCAGCAAGTTCGTCCACCCGGTGGTGGCCGACGCACTGACTGAACGCTTCAAGAAGCAAGCCTGACGCCTGATTGTCGCGCCCGC‑GTGCACTGCGGGCGCGAATGCGGCACAATTGTGCCCAt < 1:1400868/150‑1 (MQ=255) ttGCAGCGCTGGGCGGTGATATCAGCAAGTTCTTCCACCCTGTGGTGGCCGACGCACTGACTGAACGCTTCAAGAAGCAAGCCTGACGCCTGATTGTCGCGCCCGC‑GTGCACTGCGGGCGCGAATGCGGCACAATTGTGCCCATTGCGtt < 2:2929866/150‑1 (MQ=255) cAGCGCTGGGCGGTGATATCAGCAAGTTCGTCCACCCGGTGGTGGCCGACGCACTGACTGAACGCTTCAAGAAGCAAGCCTGACGCCTGATTGTCGCGCCCGC‑GTGCACTGCGGGCGCGAATGCGGCACAATTGTGCCCATTGCGTTGaa < 2:283307/150‑1 (MQ=255) aGCGCTGGGCGGTGATATCAGCAAGTTCGTCCACCCGGTGGTGGCCGACGCACTGACTGAACGCTTCAAGAAGCAAGCCTGACGCCTGATTGTCGCGCCCGC‑GTGCACTGCGGGCGCGAATGCGGCACAATTGTGCCCATTGCGTTGAAc > 2:843210/1‑150 (MQ=255) gTGATATCAGCAAGTTCGTCCACCCGGTGGTGGCCGACGCACTGACTGAACGCTTCAAGAAGCAAGCCTGACGCCTGATTGTCGCGCCCGC‑GTGCACTGCGGGCGCGAATGCGGCACAATTGTGCCCATTGCGTTGAACATGCCCGGGCt < 1:2050743/150‑1 (MQ=255) tGATATCAGCAAGTTCGTCCACCCGGTGGTGGCCGACGCACTGACTGAACGCTTCAAGAAGCAAGCCTGACGCCTGATTGTCGCGCCCGC‑GTGCACTGCGGGCGCGAATGCGGCACAATTGTGCCCATTGCGTTGAACATGCCCGGGCtg < 2:3027580/150‑1 (MQ=255) atatCAGCAAGTTCGTCCACCCGGTGGTGGCCGACGCACTGACTGAACGCTTCAAGAAGCAAGCCTGACGCCTGATTGTCGCGCCCGC‑GTGCACTGCGGGCGCGAATGCGGCACAATTGTGCCCATTGCGTTGAACATGCCCGGGCtgtg < 2:2317020/150‑1 (MQ=255) atCAGCAAGTTCGTCCACCCGGTGGTGGCCGACGCACTGACTGAACGCTTCAAGAAGCAAGCCTGACGCCTGATTGTCGCGCCCGCAGTGCAC‑GCGGgcgc > 1:1350744/1‑101 (MQ=255) atCAGCAAGTTCGTCCACCCGGTGGTGGCCGACGCACTGACTGAACGCTTCAAGAAGCAAGCCTGACGCCTGATTGTCGCGCCCGCAGTGCAC‑GCGGgcgc < 2:1350744/101‑1 (MQ=255) atCAGCAAGTTCGTCCACCCGGTGGTGGCCGACGCACTGACTGAACGCTTCAAGAAGCAAGCCTGACGCCTGATTGTCGCGCCCGC‑GTGCACTGCGGGCGCGAATGCGGCACAATTGTGCCCATTGCGTTGAACATGCCCGGGCTGTGAg > 2:39462/1‑150 (MQ=255) atCAGCAAGTTCGTCCACCCGGTGGTGGCCGACGCACTGACTGAACGATCGGGTTAGCAAGCCTGACGCCTGATTGTCGCGCCCGC‑GTGCACTGCGGGCGCGAATGCGGCACAATTGTGCCCATTGCGTTGAACATGCCCGGGCTGTGAg > 1:78844/1‑150 (MQ=255) cAGCAAGTTCGTCCACCCGGTGGTGGCCGACGCACTGACTGAACGCTTCAAGAAGCAAGCCTGACGCCTGATTGTCGCGCCCGC‑GTGCACTGCGGGCGCGAATGCGGCACAATTGTGCCCATTGCGTTGAACATGCCCGGGCTGTGAGcc < 2:1557237/150‑1 (MQ=255) aGCAAGTTCGTCCACCCGGTGGTGGCCGACGCACTGACTGAACGCTTCAAGAAGCAAGCCTGACGCCTGATTGTCGCGCCCGC‑GTGCACTGCGGGCGCGAATGc < 1:1698671/104‑1 (MQ=255) aGCAAGTTCGTCCACCCGGTGGTGGCCGACGCACTGACTGAACGCTTCAAGAAGCAAGCCTGACGCCTGATTGTCGCGCCCGC‑GTGCACTGCGGGCGCGAATGCGGCACAATTGTGCCCATTGCGTTGAACATGCCCGGGCt > 1:1701362/1‑142 (MQ=255) aGCAAGTTCGTCCACCCGGTGGTGGCCGACGCACTGACTGAACGCTTCAAGAAGCAAGCCTGACGCCTGATTGTCGCGCCCGC‑GTGCACTGCGGGCGCGAATGCGGCACAATTGTGCCCATTGCGTTGAACATGCCCGGGCt < 2:1701362/142‑1 (MQ=255) gCAAGTTCGTCCACCCGTTGGTGGCCGACGCACTGACTGAACGCTTCAAGAAGCAAGCCTGACGCCTGATTGTCGCGCCCGC‑GTGCACTGCGGGCGCGAATGCGGCACAATTGTGCCCATTGCGTTGAACATGCCCGGGCtgt > 1:105797/1‑143 (MQ=255) gCAAGTTCGTCCACCCGGTGGTGGCCGACGCACTGACTGAACGCTTCAAGAAGCAAGCCTGACGTCTGTTTGTCGCGCCCGC‑GTGCACTGCGGGCGCGAATGCGGCACAATTGTGCCCATTGCGTTGAACATGCCCGGGCtgt < 2:105797/143‑1 (MQ=255) gCAAGTTCGTCCACCCGGTGGTGGCCGACGCACTGACTGAACGCTTCAAGAAGCAAGCCTGACGCCTGATTGTCGCGCCCGC‑GTGCACTGCGGgcgc > 1:736171/1‑97 (MQ=255) gCAAGTTCGTCCACCCGGTGGTGGCCGACGCACTGACTGAACGCTTCAAGAAGCAAGCCTGACGCCTGATTGTCGCGCCCGC‑GTGCACTGCGGgcgc < 2:736171/97‑1 (MQ=255) gCAAGTTCGTCCACCCGGTGGTGGCCGACGCACTGACTGAACGCTTCAAGAAGCAAGCCTGACGCCTGATTGTCGCGCCCGC‑GTGCACTGCGGGCGCGAATGCGGCACAAtt < 1:1659759/112‑1 (MQ=255) gCAAGTTCGTCCACCCGGTGGTGGCCGACGCACTGACTGAACGCTTCAAGAAGCAAGCCTGACGCCTGATTGTCGCGCCCGC‑GTGCACTGCGGGCGCGAATGCGGCACAAtt > 2:1659759/1‑112 (MQ=255) gCAAGTTCGTCCACCCGGTGGTGGCCGACGCACTGACTGAACGCTTCAAGAAGCAAGCCTGACGCCTGATTGTCGCGCCCGC‑GTGCACTGCGGGCGCGAATGCGGCACAATTGTGCCCATTGCGTTGAACATGCCCGGGCtgt > 1:1878678/1‑143 (MQ=255) cAAGTTCGTCCACCCGGTGGTGGCCGACGCACTGACTGAACGCTTCAAGAAGCAAGCCTGACGCCTGATTGTCGCGCCCGC‑GTGCACTGCGGGCGCGAATGCGGCACAATTGTGCCCATTGCGTTGAACATGCCCGGGCtgtg > 1:2669906/1‑143 (MQ=255) cAAGTTCGTCCACCCGGTGGTGGCCGACGCACTGACTGAACGCTTCAAGAAGCAAGCCTGACGCCTGATTGTCGCGCCCGC‑GTGCACTGCGGGCGCGAATGCGGCACAATTGTGCCCATTGCGTTGAACATGCCCGGGCtgtg < 2:2669906/143‑1 (MQ=255) aaGTTCGTCCACCCGGTGGTGGCCGACGCACTGACTGAACGCTTCAAGAAGCAAGCCTGACGCCTGATTGTCGCGCCCGCAGTGCAC‑GCGGgcgc < 2:1368172/95‑1 (MQ=39) aGTTCGTCCACCCGGTGGTGGCCGACGCACTGACTGAACGCTTCAAGAAGCAAGCCTGACGCCTGATTGTCGCGCCCGC‑GTGCACTGCGGGCGCGAATGCGGCACAATTGTGCCCATTGCGTTGAACATGCCCGGGCTGTGAGCCccggc < 1:447556/150‑1 (MQ=255) gTTCGTCCACCCGGTGGTGGCCGACGCACTGACTGAACGCTTCAAGAGGCAAGCCTGACGCCTGATTGTCGCGACCGC‑GTGAACTGCGGGCGCGAATGCGGCACAATTGTGCCCCTTGCGTTGAACATGACCGGGATGTGAGCCcaggcc > 1:824111/1‑150 (MQ=255) ttCGTCCACCCTGTGGTGGCCGACGCACTGACTGAACGCTTCAAGAAGCAAGCCTGACGCCTGATTGTCGCGCCCGC‑GTGCACTGCGGGCGCGAATGCGGCACAATTGTGCCCATTGCGTTGAACATGCCCGGGCTGTGAGCCccggccg < 1:3016518/150‑1 (MQ=255) tCGTCCACCCGGTGGTGGCCGACGCACTGACTGAACGCTTCAAGAAGCAAGCCTGACGCCTGATTGTCGCGCCCGC‑GTGCACTGCGGGCGCGAATGCGGCACAATTGTGCCCATTGCGTTGAACATGCCCGGGCTGTGAGCCccggccgg > 1:6563/1‑150 (MQ=255) cGTCCACCCGGTGGTGGCCGACGCACTGACTGAACGCTTCAAGAAGCAAGCCTGACGCCTGATTGTCGCGCCCGC‑GTGCACTGCGGGCGCGAATGCGGCACAATTGTGCCCATTGCGTTGAACATGCCCGGGCTGTGAGCCCCGGCCGGa < 2:742879/150‑1 (MQ=255) gTCCACCCGGTGGTGGCCGACGCACTGACTGAACGCTTCAAGAAGCAAGCCTGACGCCTGATTGTCGCGCCCGC‑GTGCACTGCGGGCGCGAATGCGGCACAATTGTGCCCATTGCGTTGAACATGCCCGGGCTGTGAGCCCCGGCCGGAg > 2:420360/1‑150 (MQ=255) tCCACCCGGTGGTGGCCGACGCACTGACTGAACGCTTCAAGAAGCAAGCCTGACGCCTGATTGTCGCGCCCGC‑GTGCACTGCGGGCGCGAATGCg > 2:1765614/1‑95 (MQ=255) tCCACCCGGTGGTGGCCGACGCACTGACTGAACGCTTCAAGAAGCAAGCCTGACGCCTGATTGTCGCGCCCGC‑GTGCACTGCGGGCGCGAATGCg < 1:1765614/95‑1 (MQ=255) gcagttggtggCCGACGCACTGACTGAATGCTTCAAGAAGCAAGCCTGACGCCTGATTGTCGCGCCCAC‑GTGCACTGCGGGCGCGAATGCGGCACAATTGTGCCCATTGCGTTGAACATGCCCGGGCTGTGAGCCCCGGCCGGAGTcccc < 1:2279325/145‑1 (MQ=255) ccGGTGGTGGCCGACGCACTGACTGAACGCTTCAAGAAGCAAGCCTGACGCCTGATTGTCGCGCCCGC‑GTGCACTGCGGGCGCGAATGCGGCACAATTGTGCCCATTGCGTTGAACATGCCCGGGCTGTGAGCCCCGGCCGGAGTCCCCa > 2:1856348/1‑150 (MQ=255) ccGGTGGTGGCCGACGCACTGACTGAACGCTTCAAGAAGCAAGCCTGACGCCTGATTGTCGCGCCCGC‑GTGCACTGCGGGCGCGAATGCGGCACAATTGTGCCCATTGCGTTGAACATGCCCGGGCTGTGAGCCCCGGCCGGAGTCCCCa > 2:60941/1‑150 (MQ=255) cGGTGGTGGCCGACGCACTGACTGAACGCTTCAAGAAGCAAGCCTGACGCCTGATTGTCGCGCCCGC‑GTGCACTGCGGGCGCGAATGCGGCACAATTGTGCCCATTGCGTTGAACATGCCCGGGCTGTGAGCCCCGGCCGGAGTCCCCAt < 1:1856348/150‑1 (MQ=255) ggCCGACGCACTGACTGAACGCTTCAAGAAGCAAGCCTGACGCCTGATTGTCGCGCCCGC‑GTGCACTGCGGGCGCGAATGCGGCACAATTGTGCCCATTGCGTTGAACATGCCCgg > 2:1363565/1‑116 (MQ=255) ggCCGACGCACTGACTGAACGCTTCAAGAAGCAAGCCTGACGCCTGATTGTCGCGCCCGC‑GTGCACTGCGGGCGCGAATGCGGCACAATTGTGCCCATTGCGTTGAACATGCCCgg < 1:1363565/116‑1 (MQ=255) gCCGACGCACTGACTGAACGCTTCAAGAAGTAAGCCTGACGCCTGATTGTCGCGCCCGC‑GTGCACTGCGGGCGCGAATGCGGCACAATTGTGCCCATTGCGTTGAACATGCCCGGGCTGTGAGCCCCGGCCGGAGTCCCCATGTCCCTGa > 1:1197680/1‑150 (MQ=255) cGACGCACTGACTGAACGCTTCAAGAAGCAAGCCTGACGCCTGATTGTCGCGCCCGC‑GTGCACTGCGGGCGCGAATGCGGCACAATTGTGCCCATTGCGTTGAACATGCCCGGGCTGTTAGCCCCGGCCGGAGTCCCCATGTCCCTGatc < 1:128490/150‑1 (MQ=255) cACTGACTGAACGCTTCAAGAAGCAAGCCTGACGCCTGATTGTCGCGCCCGC‑GTGCACTGCGGGCGCGAATGCGGCACAATTGTGCCCATTGCGTTGAACATGCCCGGGCTGTGAGCCCCGGCCGGAGTCCCCATGTCCCTGATCATCAc < 1:60941/150‑1 (MQ=255) cACTGACTGAACGCTTCAAGAAGCAAGCCTGACGCCTGATTGTCGCGCCCGC‑GTGCACTGCGGGCGCGAATGCGGCACAATTGTGCCCATTGCGTTGAACATGCCCGGGCTGTGAGCCCCGGCCGGAGTCCCCATGTCCCTGATCATCAc < 1:420360/150‑1 (MQ=255) actgactgAACGCTTCAAGAAGCAAGCCTGACGCCTGATTGTCGCGCCCGC‑GTGCACTGCGGGCGCGAATGCGGCACAATTGTGCCCATTGCGt < 1:2580321/94‑1 (MQ=255) actgactgAACGCTTCAAGAAGCAAGCCTGACGCCTGATTGTCGCGCCCGC‑GTGCACTGCGGGCGCGAATGCGGCACAATTGTGCCCATTGCGt > 2:2580321/1‑94 (MQ=255) actgactgAACGCTTCAAGAAGCAAGCCTGACGCCTGATTGTCGCGCCCGC‑GTGCACTGCGGGCGCGAATGCGGCACAATTGTGCCCATTGCGTTGAACATGCCCGGGCTGTGAGCCCCGGCCGGAGTCCCCATGTCCCTGATCATCAcc > 2:2429047/1‑150 (MQ=255) gactgaACGCTTCAAGAAGCAAGCCTGGCGCCTGATTGTCGCGCCCGC‑GTGCACTGCGGGCGCGAATGCGGCACAATTGTGCCCATTGCGTTGAACATGCCCGGGCTGTGAGCCCCGGCCGGAGTCCCCATGTCCCTGATCATCACcgac < 2:158266/150‑1 (MQ=255) gactgaACGCTTCAAGAAGCAAGCCTGACGCCTGATTGTCGCGCCCGC‑GTGCACTGCGGGCGCGAATGCGGCACAATTGTGCCCATTGCGTTGAACATGCCCGGGCTGTGAGCCCCGGCCGGa > 1:2614917/1‑123 (MQ=255) tgaACGCTTCAAGAAGCAAGCCTGACGCCTGATTGTCGCGCCCGC‑GTGCACTGCGGGCGCGAATGCGGCACAATTGTGCCCATTGCGTTGAACATGCCCGGGCTGTGAGCCCCGGCCGGAGTCCCCATGTCCCTGATCATCACCGACGAt > 2:2446086/1‑150 (MQ=255) tgaACGCTTCAAGAAGCAAGCCTGACGCCTGATTGTCGCGCCCGC‑GTGCACTGCGGGCGCGAATGCGGCACAATTGTGCCCATTGCGTTGAACATGCCCGGGCTGTGAGCCCCGGCCGGAGTCCCCATGTCCCTGATCATCACCGACGAt > 2:1542701/1‑150 (MQ=255) gaACGCTTCAAGAAGCAAGCCTGACGCCTGATTGTCGCGCCCGC‑GTGCACTGCGGGCGCGAATGCGGCACAATTGTGCCCATTGCGTTGAACATGCCCGGGCTGTGAGCCCCGGCCGGAGTCCCCATGTCCCTGATCATCACCGACGAtt < 1:2446086/150‑1 (MQ=255) cGCTTCAAGAAGCAAGCCTGACGCCTGATTGTCGCGCCCGT‑TTGCACTGCGGGCGCGAATGCGGCACAATTGTGCCCATTGCGTTGAACATGCCCGGGCTGTGAGCCCCGGCCGGAGTCCCCATGTCCCTGATCATCACCGACGATTGCa < 1:2335212/150‑1 (MQ=255) gCTTCAAGAAGCAAGCCTGACGCCTGATTGTCGCGCCCGC‑GTGCACTGCGGGCGCGAATGCGGCACAATTGTGCCCATTGCGTTGAACATGCCCGGGCTGTGAGCCCCGGCCGGAGTCCCCa < 2:105604/122‑1 (MQ=255) gCTTCAAGAAGCAAGCCTGACGCCTGATTGTCGCGCCCGC‑GTGCACTGCGGGCGCGAATGCGGCACAATTGTGCCCATTGCGTTGAACATGCCCGGGCTGTGAGCCCCGGCCGGAGTCCCCa > 1:105604/1‑122 (MQ=255) gCTTCAAGAAGCAAGCCTGACGCATGATTGTCGCGCCCGC‑GTGCACTGCGGGCGCGAATGCGGCACAATTGTGCCCATTGCGTTGAACATGCCCGGGCTGTGAGCCCCGGCCGGAGTCCCCATGTCCCTGATCATCACCGACGATTGCAt < 1:2564883/150‑1 (MQ=255) ttCAAGAAGCAAGCCTGACGCCTGATTGTCGCGCCCGC‑GTGCACTGCGGGCGCGAATGCGGCACAATTGTGCCCATTGCGTTGAACATGCCCGGGCTGTGAGCCCCGGCCGGAGTCCCCa < 2:1696632/120‑1 (MQ=255) cAAGAAGCAAGCCTGACGCCTGATTGTCGCGCCCGC‑GTGCACTGCGGGCGCGAATGCGGCACAATTGTGCCCATTGCGTTGAACATGCCCGGGCTGTGAGCCCCGGCCGGAGTCCCCATGTCCCTGATCATCACCGACGATTGCATCAAt > 1:1047569/1‑150 (MQ=255) aagaagCAAGCCTGACGCCTGATTGTCGCGCCCGC‑GTGCACTGCGGGCGCGAATGCGGCACAATTGTGcc > 2:2559990/1‑70 (MQ=255) aagaagCAAGCCTGACGCCTGATTGTCGCGCCCGC‑GTGCACTGCGGGCGCGAATGCGGCACAATTGTGcc < 1:2559990/70‑1 (MQ=255) agaagCAAGCCTGACGCCTGATTGTCGCGCCCGC‑GTGCACTGCGGGCGCGAATGCGGCACAATTGTGCCCATTGCGTTGAACATGCCCGGGCTGTGAGCCCCGGCCGGAGTCCCCATGTCCCTGATCATCACCGACGATTGCATCAATTg > 1:898272/1‑150 (MQ=255) agaagCAAGCCTGACGCCTGATTGTCGCGCCCGC‑GTGCACTGCGGGCGCGAATGCGGCACAATTGTGCCCATTGCGTTGAACATGCCCGGGCTGTGAGCCCCGGCCGGAGTCCCCATGTCCCTGATCATCACCGACGATTGCATCAATTg > 2:179598/1‑150 (MQ=255) gaagTAAGCCTGACGCCTGATTGTCGCGCCCGC‑GTGCACTGCGGGCGCGAATGCGGCACAATTGTGCCCATTGCGTTGAACATGCCCGGGCTGTGAGCCCCGGCCGGAGTCCCCATGTCCCTGATCATCACCGACGATTGCATCAATTGc < 2:1197680/150‑1 (MQ=255) gaagCAAGCCTGACGCCTGATTGTCGCGCCCGC‑GTGCACTGCGGGCGCGAATGCGGCACAATTGTGCCCATTGCGTTGAACATGCCCGGGCTGTGAGCCCCGGCCGGAGTCCCCATGTCCCTGATCATCACCGACGATTGCATCAATTGc < 1:843210/150‑1 (MQ=255) agcaagcCTGACGCCTGATTGTCGCGCCCGC‑GTGCACTGCGGGCGCGAATGCGGCACAATTGTGCCCATTGCGTTGAACATGCCCGGGCTGTGAGCCCCGGCCGGAGTCCCCATGTCCCTGATCATCACCGACGATTGCATCAATTGCGa > 2:770727/1‑150 (MQ=255) caagcCTGACGCCTGATTGTCGCGCCCGC‑GTGCACTGCGGGCGCGAATGCGGCACAATTGTGCCCATTGCGTTGAACATGCCCGGGCTGTGAGCCCCGGCCGGAGTccc > 1:151340/1‑109 (MQ=255) caagcCTGACGCCTGATTGTCGCGCCCGC‑GTGCACTGCGGGCGCGAATGCGGCACAATTGTGCCCATTGCGTTGAACATGCCCGGGCTGTGAGCCCCGGCCGGAGTccc < 2:151340/109‑1 (MQ=255) agcCTGACGCCTGATTGTCGCGCCCGC‑GTGCACTGCGGGCGCGAATGCGGCACAATTGTGCCCATTGCGTTGAACATGCCCGGGCTGTCAGCCCCGGCCGGAGTCCCCATGTCCCTGATCATCACCGACGATTGCATCACTTGCGACGtt > 2:1806091/1‑149 (MQ=255) tGACGCCTGATTGTCGCGCCCGC‑GTGCACTGCGGGCGCGAATGCGGCACAATTGTGCCCATTGCGTTGAACATGCCCGGGCTGTGAGCCCCGGCCGGAGTCCCCATGTCCCTGATCATCACcga > 1:1283671/1‑124 (MQ=255) tGACGCCTGATTGTCGCGCCCGC‑GTGCACTGCGGGCGCGAATGCGGCACAATTGTGCCCATTGCGTTGAACATGCCCGGGCTGTGAGCCCCGGCCGGAGTCCCCATGTCCCTGATCATCACcga < 2:1283671/124‑1 (MQ=255) tGACGCCTGATTGTCGCGCCCGC‑GTGCACTGCGGGCGCGAATGCGGCACAATTGTGCCCATTGCGTTGAACATGCCCGGGCTGTGAGCCCCAGACGGTGGCTCCATGTCCCTGATCATCACCGACGATTGCATCAATTGCGACGTCTGCg > 2:2385247/1‑150 (MQ=255) aCGCCCGATTGTCGCGCCCGC‑GTGCACTGCGGGCGCGAATGCGGCACAATTGTGCCCATTGCGTTGAACATGCCCGGGCTGTGAGCCCCGGCCGGAGTCCCCATGTCCCTGATCATCACCGACGATTGCATCAATTGCGACGTCTGCGaa > 2:1733033/1‑150 (MQ=255) cTGATTGTCGCGCCCGC‑GTGCACTGCGGGCGCGAATGCGGCACAATTGTGCCCATTGCGTTGAACATGCCCGGGCTGTGAGCCCCGGCCGGAGTcc > 2:2117954/1‑96 (MQ=255) gATTGTCGCGCCCGC‑GTGCACTGCGGGCGCGAATGCGGCACAATTGTGCCCATTGCGTTGAACATGCCCGGGCTGTGAGCCCCGGCCGGAGTCCCCATGTCCCTGATCATCACCGACGATTGCATCAATTGCGACGTCTGCGAACCCGAg > 1:1656076/1‑150 (MQ=255) gcattCGCGCCCGCAGTGCAC‑GCGGGCGCGAATGCGGCACAATTGTGCCCATTGCGTTGAACATGCCCGGGCTGTGAGCCCCGGCCGGAGTCCCCATGTCCCTGat < 2:151889/102‑1 (MQ=38) gcattCGCGCCCGCAGTGCAC‑GCGGGCGCGAATGCGGCACAATTGTGCCCATTGCGTTGAACATGCCCGGGCTGTGAGCCCCGGCCGGAGTCCCCATGTCCCTGat > 1:151889/5‑106 (MQ=38) cgcgCCCGCAGTGCAC‑GCGGGCGCGAATGCGGCACAATTGTGCCCATTGCGTTGAACATGCCCGGGCTGTGAGCCCCGGTCGGAGTCCCCATGTCCCTGATCATCACCGACGATTGCATCAATTGCGACGTCTGCGAACCCGAGTGCCCg > 2:1604280/1‑150 (MQ=255) cgcgCCCGCAGTGCAC‑GCGGGCGCGAATGCGGCACAATTGTGCCCATTGCGTTGAACATGCCCGGGCTGTGAGCCCCGGTCGGAGTCCCCATGTCCCTGATCATCACCGACGATTGCATCAATTGCGACGTCTGCGAACCCGAGTGCCCg < 1:1604280/150‑1 (MQ=255) gcgcCCGCAGTGCAC‑GCGGGCGCGAATGCGGCACAATTGTGCCCATTGCGTTGAACATGCCCGGGCTGTGAGCCCCGGCCGGAGTCCCCATGTCCCTGATCATCACCGACGATTGCATCAATTGCGACGTCTGCGAACCCGAGTGCCCGa > 2:2289911/1‑150 (MQ=255) gcgcCCGC‑GTGCACTGCGGGCGCGAATGCGGCACAATTGTGCCCATTGCGTTGAACATGCCCGGGCTGTGAGCCACCACCGGGGTGCCCATGTCCCTGATCATCACCGACGATTGCATCAATTGCGACGTCTGCGAACCCGAGTGCCCGa > 1:697826/1‑150 (MQ=255) ccgcagTGCAC‑GCGGGCGCGAATGCGGCACAATTGTGCCCATTGCGTTGAACATGCCCGGGCTGTGAGCCCCGGCCGGAGTCCCCATGTCCCTGATCATCACCGACGATTGCATCAATTGCGACGTCTGCGAACCCGAGTGCCCGAACGa > 2:1760194/6‑150 (MQ=255) gcagTGCAC‑GCGGGCGCGAATGCGGCACAATTGTGCCCATTGCGTTGAACATGCCCGGGCTGTGAGCCCCGGCCGGAGTCCCCATGTCCCTGATCATCACCGACGATTGCATCAATTGCGACGTCTGCGAACCCGAGTGCCCGAACGAgg < 1:1760194/147‑1 (MQ=255) gc‑gTGCACTGCTGGCGCGAATGCGGCACAATTGTGCCCATTGCGTTGAACATGCCCGGGCTGTGAGCCCCGGCCGGAGTCCCCATTTCCCTGATCATCACCGACGATTGCATCAATTGCGACGTCTGCGAACCCGAGTGCCCGAACGAgg < 1:3018273/150‑1 (MQ=255) gc‑gTGCACTGCGGGCGCGAATGCGGCACAATTGTGCCCATTGCGTTGAACATGCCCGGGCTGTGAGCCCCGGCCGGAGTcccc > 2:865717/1‑83 (MQ=255) cACTGCGGGCGCGAATGCGGCACAATTGTGCCCATTGCGTTGAACATGCCCGGGCTGTGAGCCCCGGCCGGAGTCCCCATGTCCCTGATCATCACCGACGATTGCATCAATTGCGACGTCTGCGAACCCGAGTGccc > 1:1793877/1‑137 (MQ=255) cACTGCGGGCGCGAATGCGGCACAATTGTGCCCATTGCGTTGAACATGCCCGGGCTGTGAGCCCCGGCCGGAGTCCCCATGTCCCTGATCATCACCGACGATTGCATCAATTGCGACGTCTGCGAACCCGAGTGccc < 2:1793877/137‑1 (MQ=255) | TTATTCGTTCATTTCCTCGACCCTGGTCCGGGAGATTGCAGCGCTGGGCGGTGATATCAGCAAGTTCGTCCACCCGGTGGTGGCCGACGCACTGACTGAACGCTTCAAGAAGCAAGCCTGACGCCTGATTGTCGCGCCCGC‑GTGCACTGCGGGCGCGAATGCGGCACAATTGTGCCCATTGCGTTGAACATGCCCGGGCTGTGAGCCCCGGCCGGAGTCCCCATGTCCCTGATCATCACCGACGATTGCATCAATTGCGACGTCTGCGAACCCGAGTGCCCGAACGAGG > NC_002947/5845511‑5845799 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |