| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 5,212,540 | Δ1 bp | 6.5% | intergenic (+56/+38) | PP_4593 → / ← PP_4594 | hypothetical protein/cystathionine gamma‑synthase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 5,212,540 | 0 | C | . | 6.5% | 398.7 / 24.5 | 138 | intergenic (+56/+38) | PP_4593/PP_4594 | hypothetical protein/cystathionine gamma‑synthase |
| Reads supporting (aligned to +/- strand): ref base C (63/60); new base . (5/4); total (71/67) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 6.04e-01 | |||||||||||
Only 100 of 146 total aligned reads displayed.
GGCACCAACGACGAAGCCGTCAACCGCCTGCGCAAGGAAAGGTTGCTGATCAAGGACAAGATCGAACGGATCATTCATCCGCCCAAATCCTGACAGGCATCTATTGAATCCACCGGCCTCTTCGCGGGCAAGCCCGCTCCTAC‑ACCGTCGTAGGAGCGGGTTTACCCGCGAAAGGGCCTGCGGCCCTCACACAGCGACCAGCGCTTTCAACGCCCCATCCAGGTCCTCGACCAGGTCACGGTAATCCTCGATCCCTACCGACAACCGCAGCAGGTTCTCGCTGATCCCCATCACCC > NC_002947/5212392‑5212687 | aCCAACGACGAAGCCGTCAACCGCCTGCGCAAGGAAAGGTTGCTGATCAAGGACAAGATCGAACGGATCATTCATCCGCCCAAATCCTGACAGGCATCTATTGAATCCACCGGCCTCTTCGCGGGCAAGCCCGCTCCTAC‑ACCGTCGTAg < 2:3003742/150‑1 (MQ=255) ccAACGACGAAGCCGTCAACCGCCTGCGCAAGGAAAGGTTGCTGATCAAGGACAAGATCGAACGGATCATTCATCCGCCCAAATCCTGACAGGCATCTATTGAATCCACCGGCCTCTTCGCGGGCAAGCCCGCTCCTAC‑ACCGTCGTAgg > 2:232279/1‑150 (MQ=255) cAACGACGAAGCCGTCAACCGCCGGCGCAAGGAAAGGTTGCTGATCAAGGACAAGATCGAACGGATCATTCATCCGCCCAAATCCTGACAGGCATCTATTGAATCCACCGGCCTCTTCGCGGGCAAGCCCGCTCCTAC‑ACCGTCGTAGGa > 2:152816/1‑150 (MQ=255) gacgaAGCCGTCAACCGCCTGCGCAAGGAAAGGTTGCTGATCAAGGACAAGATCGAACGGATCATTCATCCGCCCAAATCCTGACAGGCATCTATTGAATCCACCGGCCTCTTCGCGGGCAAGCCCGCTCCTAC‑ACCGTCGTAGGAGCgg < 2:2884673/150‑1 (MQ=255) gaAGCCGTCAACCGCCTGCGCAAGGAAAGGTTGCTGATCAAGGACAAGATCGAACGGATCATTCATCCGCCCAAATCCTGACAGGCATCTATTGAATCCACCGGCCTCTTCGCGGGCAAGCCCGCTCCTAC‑ACCGTCGTAGGAGCggg > 1:1940509/1‑148 (MQ=255) gaAGCCGTCAACCGCCTGCGCAAGGAAAGGTTGCTGATCAAGGACAAGATCGAACGGATCATTCATCCGCCCAAATCCTGACAGGCATCTATTGAATCCACCGGCCTCTTCGCGGGCAAGCCCGCTCCTAC‑ACCGTCGTAGGAGCggg < 2:1940509/148‑1 (MQ=255) gaAGCCGTCAACCGCCTGCGCAAGGAAAGGTTGCTGATCAAGGACAAGATCGAACGGATCATTCATCCGCCCAAATCCTGACAGGCATCTATTGAATCCACCGGCCTCTTCGCGGGCAAGCCCGCTCCTAC‑ACCGTCGTAGGAGCGGGtt < 2:2918338/150‑1 (MQ=255) gCCGTCAACCGCCTGCGCAAGGAAAGGTTGCTGATCAAGGACAAGATCGAACGGATCATTCATCCGCCCAAATCCTGACAGGCATCTATTGAATCCACCGGCCTCTTCGCGGGCAAGCCCGCTCCTAC‑ACCGTCGTAGGAGCGGGTTTAc > 1:2774796/1‑150 (MQ=255) cGTCAACCGCCTGCGCAAGGAAAGGTTGCTGATCAAGGACAAGATCGAACGGATCATTCATCCGCCCAAATCCTGACAGGCATCTATTGAATCCACCGGCCTCTTCGCGGGCAAGCCCGCTCCTAC‑ACCGTCGTAGGAGCGGGTTTAccc < 1:2885309/150‑1 (MQ=255) cGTCAACCGCCTGCGCAAGGAAAGGTTGCTGATCAAGGACAAGATCGAACGGATCATTCATCCGCCCAAATCCTGACAGGCATCTATTGAATCCACCGGCCTCTTCGCGGGCAAGCCCGCTCCTAC‑ACCGTCGTAGGAGCGGGTTTAccc < 1:2099693/150‑1 (MQ=255) gTCAACCGCCTGCGCAAGGAAAGGTTGCTGATCAAGGACAAGATCGAACGGATCATTCATCCGCCCAAATCCTGACAGGCATCTATTGAATCCACCGGCCTCTTCGCGGGCAAGCCCGCTCCTAC‑ACCGTCGTAGCAGCGGGTTTAcccc > 1:2432042/1‑149 (MQ=255) ccGCCTGCGCAAGGAAAGGTTGCTGATCAAGGACAAGATCGAACGGATCATTCATCCGCCCAAATCCTGACAGGCATCTATTGAATCCACCGGCCTCTTCGCGGGCAAGCCCGCTCCTAC‑ACCGTCGTAGGAGCGGGTTTACCCGCGaaa < 1:1032777/150‑1 (MQ=255) cGCCTGCGCAAGGAAAGGTTGCTGATCAAGGACAAGATCGAACGGATCATTCATCCGCCCAAATCCTGACAGGCATCTATTGAATCCACCGGCCTCTTCGCGGGCAAGCCCGCTCCTAC‑ACCGTCGTAGGAGCGGGTTTACCCGCGAAAg > 2:2923296/1‑150 (MQ=255) cTGCGCAAGGAAAGGTTGCTGATCAAGGACAAGATCGAACGGATCATTCATCCGCCCAAATCCTGACAGGCATCTATTGAATCCACCGGCCTCTTCGCGGGCAAGCCCGCTCCTAC‑ACCGTCGTAGGAGCGGGTTTACCCGCGAAAGGGc > 2:310620/1‑150 (MQ=255) aaGGAGAGGTTGCTGATCAAGGACAAGATCGAACGGATCATTCATCCGCCCAAGTCCTGACAGGCATCTATTGAATCCACCGGCCTCTTCGCGGGCAAGCCCGCTCCTAC‑ACCGTCGTAGGAGCGGGTTTACCCGCGAAAGGGCCTGCgg < 1:2930143/150‑1 (MQ=255) aaGGAAAGGTTGCTGATCAAGGACAAGATCGAACGGACCATTCATCCGCCCAAATCCTGACAGGCATCTATTGAATCCACCGGCCTCTTCGCGGGCAAGCCCGCTCCTAC‑ACCGTCGTAGGAGCGGGTTTACCCGCGAAAGGGCCTGCgg > 2:1292750/1‑150 (MQ=255) aGGAAAGGTTGCTGATCAAGGACAAGATCGAACGGATCATTCATCCGCCCAAATCCTGACAGGCATCTATTGAATCCACCGGCCTCTTCGCGGGCAAGCCCGCTCCTAC‑ACCGTCGTAGGAGCGGGTTTACCCGCGAAAGGGCCTGCGGc < 2:668681/150‑1 (MQ=255) ggAAAGGTTGCTGATCAAGGACAAGATCGAACGGATCATTCATCCGCCCAAATCCTGACAGGCATCTATTGAATCCACCGGCCTCTTCGCGGGCAAGCCCGCTCCTAC‑ACCGTCGTAGGAGCGGGTTTACCCGCGAAAGGGCCTGCGGcc > 2:1377213/1‑150 (MQ=255) ggAAAGGTTGCTGATCAAGGACAAGATCGAACGGATCATTCATCCGCCCAAATCCTGACAGGCATCTATTGAATCCACCGGCCTCTTCGCGGGCAAGCCCGCTCCTAC‑ACCGTCGTAGGAGCGGGTTTACCCGCGAAAGGGCCTGCGGcc > 1:1385117/1‑150 (MQ=255) gAAAGGTTGCTGATCAAGGACAAGATCGAACGGATCATTCATCCGCCCAAATCCTGACAGGCATCTATTGAATCCACCGGCCTCTTCGCGGGCAAGCCCGCTCCTAC‑ACCGTCGTAGGAGCGGGTTTACCCGCGAAAGGGCCTGCGGccc < 1:2659499/150‑1 (MQ=255) aaaGGTTGCTGATCAAGGACAAGATCGAACGGATCATTCATCCGCCCAAATCCTGACAGGCATCTATTGAATCCACCGGCCTCTTCGCGGGCAAGCCCGCTCCTAC‑ACCGTCGTAGGAGCGGGTTTACCCGCGAAAGGGCCTGCGGCCCt < 2:2790300/150‑1 (MQ=255) aaaGGTTGCTGAGCAAGGACAAGATCGAACGGATCATTCATCCGCCCAAATCCTGACAGGCATCTATTGAATCCACCGGCCTCTTCGCGGGCAAGCCCGCTCCTAC‑ACCGTCGTAGGAGCGGGTTTACCCGCGAAAGGGCCTGCGGCCCt < 2:1085467/150‑1 (MQ=255) gTTGCTGATCAAGGACAAGATCGAACGGATCATTCATCCGCCCAAATCCTGACAGGCATCTATTGAATCCACCGGCCTCTTCGCGGGCAAGCCCGCTCCTAC‑ACCGTCGTAGGAGCGGGTTTACCCGCGAAAGGGCCTGCGGCCCTcaca < 1:232279/150‑1 (MQ=255) gCTGATCAAGGACAAGATCGAACGGATCATTCATCCGCCCAAATCCTGACAGGCATCTATTGAATCCACCGGCCTCTTCGCGGGCAAGCCCGCTCCTAC‑ACCGTCGTAGGAGCGGGTTTACCCGCGAAAGGGCCTGCGGCCCTCACACAg < 1:2157476/150‑1 (MQ=255) cTGATCAAGGACAAGATCGAACGGATCATTCATCCGCCCAAATCCTGACAGGCATCTATTGAATCCACCGGCCTCTTCGCGGGCAAGCCCGCTCCTAC‑ACcgtc < 1:770805/104‑1 (MQ=255) cTGATCAAGGACAAGATCGAACGGATCATTCATCCGCCCAAATCCTGACAGGCATCTATTGAATCCACCGGCCTCTTCGCGGGCAAGCCCGCTCCTAC‑ACcgtc > 2:770805/1‑104 (MQ=255) tGATCAAGGACAAGATCGAACGGATCATTCATCCGCCCAAATCCTGACAGGCATCTATTGAATCCACCGGCCTCTTCGCGGGCAAGCCCGCTCCTAC‑ACCGTCGTAGGAGCGGGTTTACCCGCGAAAGGGCCTGCGGCCCTCACACAGCg > 1:2026596/1‑150 (MQ=255) gATCAAGGACAAGATCGAACGGATCATTCATCCGCCTAAATCCTGACAGGCATCTATTGAATCCACCGGCCTCTTCGCGGGCAAGCCCGCTCCTAC‑ACCGTCGTAGGAGCGGGTTTACCCGCGAAAGGGCCTGCGGCCCTCACACAGCGa < 1:2892102/150‑1 (MQ=255) gATCAAGGACAAGATCGAACGGATCATTCATCCGCCCAAATCCTGACAGGCATCTATTGAATCCACCGGCCTCTTCGCGGGCAAGCCCGCTCCTAC‑ACCGTCGTAGGAGCGGGTTTACCCGCGAAAGGGCCTGCGGCCCTCACACAGCGa > 1:717357/1‑150 (MQ=255) aGGACAAGATCGAACGGATCATTCATCCGCCCAAATCCTGACAGGCATCTATTGAATCCACCGGCCTCTTCGCGGGCAAGCCCGCTCCTAC‑ACCGTCGTAGGAGCGGGTTTACCCGCGAAAGGGCCTGCGGCCCTCACACAGCGACCAgc > 1:1357943/1‑150 (MQ=255) aGGACAAGATCGAACGGATCATTCATCCGCCCAAATCCTGACAGGCATCTATTGAATCCACCGGCCTCTTCGCGGGCAAGCCCGCTCCTAC‑ACCGTCGTAGGAGCGGGTTTACCCGCGAAAGGGCCTGCGGCCCTCACACAGCGACCAgc > 1:1284862/1‑150 (MQ=255) ggACAAGATCGAACGGATCATTCATCCGCCCAAATCCTGACAGGCATCTATTGAATCCACCGGCCTCTTCGCGGGCAAGCCCGCTCCTAC‑ACCGTCGTAGGAGCGGGTTTACCCGCGAAAGGGCCTGCGGCCCT‑ACACAGCGACCAgcgc > 2:2769859/1‑150 (MQ=255) gACAAGATCGAACGGATCATTCATCCGCCCAAATCCTGACAGGCATCTATTGAATCCACCGGCCTCTTCGCGGGCAAGCCCGCTCCTAC‑ACCGTCGTAGGAGCGGGTTTACCCGCGAAAGGGCCTGCGGCCCTCACACAGCGACCAgcgc > 1:2549265/1‑150 (MQ=255) aaGATCGAACGGATCATTCATCCGCCCAAATCCTGACAGGCATCTATTGAATCCACCGGCCTCTTCGCGGGCAAGCCCGCTCCTAC‑ACCGTCGTAGGAGCgg < 2:688127/102‑1 (MQ=255) aGATCGAACGGATCATTCATCCGCCCAAATCCTGACAGTCATCTATTGAATCCACCGGCCTCTTCGCGGGCACGCCCAATCCTAC‑ACCGTCGTAGGAGCGGGTTTACCCGCGAAAGGGCCTGCGGCCCCCACACCGCGACCAGCGCTTTc > 1:1023340/1‑150 (MQ=39) gATCGAACGGATCATTCATCCGCCCAAATCCTGACAGGCATCTATTGAATCCACCGGCCTCTTCGCGGGCAAGCCCGCTCCTAC‑ACCGTCGTAGGAGCGGGTTTACCCGCGAAAGGGCCTGCGGCCCTCACACAGCGACCAGCGCTTTCa > 1:85956/1‑150 (MQ=255) aTCGAACGGATCATTCATCCGCCCAAATCCTGACAGGCATCTATTGAATCCACCGGCCTCTTCGCGGGCAAGCCCGCTCCTACGACGGT‑GTAGGAGCgggc > 2:1626596/1‑100 (MQ=37) gAACGGATCATTCATCCGCCCAAATCCTGACAGGCATCTATTGAATCCACCGGCCTCTTCGCGGGCAAGCCCGCTCCTAC‑ACCGTCGTAGGAGCGGGTTTACCCGCGAAAGGGCCTGCGGCCCTCACACAGCGACCAGCGCTTTCAACGc > 1:957902/1‑150 (MQ=255) cGGATCATTCATCCGCCCAAATCCTGACAGGCATCTATTGAATCCACCGGCCTCTTCGCGGGCAAGCCCGCTCCTAC‑ACCGTCGTAGGAGCGGGTTTACCCGCGAAAGGGCCTGCGGCCCTCACACAGCGACCAGCGCTTTCAACGcccc < 1:152816/150‑1 (MQ=255) ggATCATTCATCCGCCCAAATCCTGACAGGCATCTATTGAATCCACCGGCCTCTTCGCGGGCAAGCCCGCTCCTAC‑ACCGTCGTAGGAGCGGGTTTACCCGCGAAAGGGCCTGCGGCCCTCACACAGCGACCAGCGCTTTCAACGCCCCa > 1:1082596/1‑150 (MQ=255) gATCATTCATCCGCCCAAATCCTGACAGGCATCTATTGAATCCACCGGCCTCTTCGCGGGCAAGCCCGCTCCTAC‑ACCGTCGTAGGAGCGGGTTTACCCGCGAAAggg > 2:1708503/1‑108 (MQ=255) gATCATTCATCCGCCCAAATCCTGACAGGCATCTATTGAATCCACCGGCCTCTTCGCGGGCAAGCCCGCTCCTAC‑ACCGTCGTAGGAGCGGGTTTACCCGCGAAAGGGCCTGCGGCCCTCACACAGCGACCAGCGCTTTCAACGCCCCAt > 2:117863/1‑150 (MQ=255) aTCATTCATCCGCCCAAATCCTGACAGGCATCTATTGAATCCACCGGCCTCTTCGCGGGCAAGCCCGCTCCTAC‑ACCGTCGTAGGAGCGGGTTTACCCGCGAAAGGGCCTGCGGCCCTCACACAGCGACCAGCGCTTTCAACGCCCCATc > 1:2244748/1‑150 (MQ=255) aTCATTCATCCGCCCAAATCCTGACAGGCATCTATTGAATCCACCGGCCTCTTCACGCGAAAGCCCGCTCATAG‑ATCTTCGGGGGAGCGGGTTTACCCGCGAAAGGGCCTGCGGCCCTCACACAGCGACCAGCGCTTTCAACGCCCCATc > 1:372909/1‑150 (MQ=255) tcattcatCCGCCCAAATCCTGACAGGCATCTATTGAATCCACCGGCCTCTTCGCGGGCAAGCCCGCTCCTAC‑ACcgtcg > 1:3020468/1‑80 (MQ=255) tcattcatCCGCCCAAATCCTGACAGGCATCTATTGAATCCACCGGCCTCTTCGCGGGCAAGCCCGCTCCTAC‑ACcgtcg < 2:3020468/80‑1 (MQ=255) attcatCCGCCCAAATCCTGACAGGCATCTATTGAATCCACCGGCCTCTTCGCGGGCAAGCCCGCTCCTAC‑ACCGTCGTAGGAGCGGGTTTACCCGCGAAAGGGCCTGCGGCCCTCACACAGCGACCAGCGCtt > 2:15458/1‑134 (MQ=255) tcatCCGCCCAAATCCTGACAGGCATCTATTGAATCCACCGGCCTCTTCGCGGGCAAGCCCGCTCCTAC‑ACCGTCGTAGGAGCGGGTTTACCCGCGAAAGGGCCTGCGGCCCTCACACAGCGACCAGCGCTTTCAACGCCCCATCCAGGt < 2:1465679/150‑1 (MQ=255) atCCGCCCAAATCCTGACAGGCATCTATTGAATCCACCGGCCTCTTCGCGGGCAAGCCCGCTCCTAC‑ACCGTCGTAGGAGCGGGTTTACCCGCGAAAGGGCCTGCGGCCCTCACACAGCGACCAGCGCTTTCAACGCCCCATCCAGGTcc < 1:1684529/150‑1 (MQ=255) gCCCAAATCCTGACAGGCATCTATTGAATCCACCGGCCTCTTCGCGGGCAAGCCCGCTCCTAC‑ACCGTCGTAGGAGCGGGTTTACCCGCGAAAGGGCCTGCGGCCCTCACACAGCGACCAgc > 1:437219/1‑122 (MQ=255) gCCCAAATCCTGACAGGCATCTATTGAATCCACCGGCCTCTTCGCGGGCAAGCCCGCTCCTAC‑ACCGTCGTAGGAGCGGGTTTACCCGCGAAAGGGCCTGCGGCCCTCACACAGCGACCAGCGCTTTCAACGCCCCATCCAGGTCCTCGa > 1:2682536/1‑150 (MQ=255) cccAAATCCTGACAGGCATCTATTGAATCCACCGGCCTCTTCGCGGGCAAGCCCGCTCCTAC‑ACCGTCGTAGGAGCGGGTTTACCCGCGAAAGGGCCTGCGGCCCTCACACAGCGACCAGCGCTTTCAACGCCCCATCCAGGTCCTCGAc < 2:1284862/150‑1 (MQ=255) ccAAATCCTGACAGGCATCTATTGAATCCACCGGCCTCTTCGCGGGCAAGCCCGCTCCTAC‑ACCGTCGTAGGAGCGGGTTTACCCGCGAAAGGGCCTGCGGCCCTCACACAGCGACCAGCGCTTTCAACGCCCCATCCAGGTCCTCGAcc > 1:409912/1‑150 (MQ=255) cAAATCCTGACAGGCATCTATTGAATCCACCGGCCTCTTCGCGGGTAAACCCGCTCCTAC‑GACGGTGTAGGAGCGGGcttgc < 1:2185836/82‑3 (MQ=17) aaaTCCTGACAGGCATCTATTGAATCCACCGGCCTCTTCGCGGGCAAGCCCGCTCCTAC‑ACCGTCGTAGGAGCGGGTTTACCCGCGAAAGGGc > 2:47731/1‑93 (MQ=255) aaaTCCTGACAGGCATCTATTGAATCCACCGGCCTCTTCGCGGGCAAGCCCGCTCCTAC‑ACCGTCGTAGGAGCGGGTTTACCCGCGAAAGGGc < 1:47731/93‑1 (MQ=255) aaccTGCCAGCTATCTATTGAATCCACCGGCCTCTTCGCGGGCAAGCCCGCTCCTAT‑ACCGTCGTAGGAGCGGGTTTACCCGCGAAAGGGCCTGCGGCCCTCACCCAGCGACCAGCGCTTTCAACGCCCCATCCAGGTCCTCGACCAGGt < 2:487316/148‑1 (MQ=38) aTCCTGACAGGCATCTATTGAATCCACCGGCCTCTTCGCGGGCAAGCCCGCTCCTAC‑ACCGTCGTAGGAGCGGGTTTACCCGCGAAAGGGCCTGCGGCCCTCACACAGCGACCAGCGCTTTCAACGCCCCATCCAGGTCCTCGACCAGGt < 1:1763713/150‑1 (MQ=255) tCCTGACAGGCATCTATTGAATCCACCGGCCTCTTCGCGGGCAAGCCCGCTCCTAC‑ACCGTCGTAGGAGCGGGTTTACCCGCGAAAGGGCCTGCGGCCCTCACACAGCGACCAGCGCTTTCAACGCCCCATCCAGGTCCTCGACCAGGTc > 2:2081198/1‑150 (MQ=255) gccTGACAGGCATCTATTGAATCCACCGGCCTCTTCGCGGGCAAGCCCGCTCCTAC‑ACCGTCGTAGGAGCGGGTTTACCCGCGAAAGGGCCTGCGGCCCTCACACAGCGACCAGCGCTTTCAACGCCCCATCCAGGTCCTCGACCAGGTc > 2:2103862/2‑150 (MQ=255) ccTGACAGGCATCTATTGAATCCACCGGCCTCTTCGCGGGCAAGCCCGCTCCTAC‑ACCGTCGTAGGAGCGGGTTTACCCGCGAAAGGGCCTGCGGCCCTCACACAGCGACCAGCGCTTTCAACGCCCCATCCAGGTCCTCGACCAGGTCa < 1:117863/150‑1 (MQ=255) gACAGGCATCTATTGAATCCACCGGCCTCTTCGCGGGCAAGCCCGCTCCTAC‑ACCGTCGTAGGAGCGGGTTTACCCGCGAAAGGGCCTGCGGCCCTCACACAGCGACCAGCGCTTTCAACGCCCCATCCAGGTCCTCGACCAGGTCACgg < 1:2081198/150‑1 (MQ=255) gACAGGCATCTATTGAATCCACCGGCCTCTTCGCGGGCAAGCCCGCTCCTAC‑ACCGTCGTAGGAGCGGGTTTACCCGCGAAAGGGCCTGCGGCCCTCACACAGCGACCAGCGCTTTCAACGCCCCATCCAGGTCCTCGACCAGGTCACgg < 2:1357943/150‑1 (MQ=255) cAGGCATCTATTGAATCCACCGGCCTCTTCGCGGGCAAGCCCGCTCCTAC‑ACCGTCGTAGGAGCGGGTTTACCCGCGAAAGGGCCTGCGGCCCT‑ACACAGCGACCAGCGCTTTCAACGCCCCATCCAGGTCCTCGACCAGGTCACGGTaa < 1:2769859/150‑1 (MQ=255) gCATCTATTGAATCCACCGGCCTCTTCGCGGGCAAGCCCGCTCCTAC‑ACCGTCGTAGGAGCGGGTTTACCCGCGAAAGGGCCTGCGGCCCTCACACAGCGACCAgc > 2:2213499/1‑106 (MQ=255) gCATCTATTGAATCCACCGGCCTCTTCGCGGGCAAGCCCGCTCCTAC‑ACCGTCGTAGGAGCGGGTTTACCCGCGAAAGGGCCTGCGGCCCTCACACAGCGACCAgc < 1:2213499/106‑1 (MQ=255) cATCTATTGAATCCACCGGCCTCTTCGCGGGCAAGCCCGCTCCTAC‑ACCGTCGTAGGAGCGGGTTTACCCGCGAAAGGGCCTGCGGCCCTCACACAGCGACCAGCGCTTTCAACGCCCCATCCAGGTCCTCGACCAGGTCACGGTAATcc < 2:957902/150‑1 (MQ=255) ttGAATCCACCGGCCTCTTCGCGGGCAAGCCAGCTCCTAC‑ACCGTCGTAGGAGCGGGTTTACCCGCGAAAGGGCCTGCGGCCCTCACACAGCGACCAGCGCTTTCAACGCCCCATCCAGGTCCTCGACCAGGTCACGGTAATCCTCGATc > 1:992174/1‑150 (MQ=255) aCCGGCCTCTTCGCGGGCAAGCCCGCTCCTAC‑ACCGTCGTAGGAGCGGGTTTACCCGCGAAAGGGCCTGTGGCCCTCACACAGCGACCAGCGCTTTCAACGCCCCATCCAGGTCCTCGAc < 1:634254/120‑1 (MQ=255) cGGCCTCTTCGCGGGCAAGCCCGCTCCTAC‑ACCGTCGTAGGAGCGGGTTTACCCGCGAAAGGGCCTGCgg > 2:2748885/1‑70 (MQ=255) ggCCTCTTCGCGGGCAAGCCCGCTCCTAC‑ACCGTCGTAGGAGCGGGTTTACCCGCGAAAGGGCCTGCGGCCCTCACACAGCGACCAGCGCTTTCAACGCCCCATCCAGGTCCTCGACCAGGTCACGGTAATCCTCGATCCCTACCGACaa > 1:211164/1‑150 (MQ=255) ctctTCGCGGGCAAGCCCGCTCCTAC‑ACCGTCTTAGGAGCGGGTTTACCCGCGAAAGGGCCTGCGGCCCTCACACAGCGACCAGCGCTTTCAACGCCCCATCCAGGTCCTCGACCAGGTCACGGTAATCCTCGATCCCTACCGACAACCg > 2:553845/1‑150 (MQ=255) tctTCGCGGGCAAGCCCGCTCCTCC‑ACCGTCGTAGGAGCGGGTTTACCCGCGAAAGGGCCTGCGGCCCTCACACAGCGACCAGCGCTTTCAACGCCCCATc < 2:2256162/101‑1 (MQ=255) tctTCGCGGGCAAGCCCGCTCCTAC‑ACCGTCGTAGGAGCGGGTTTACCCGCGAAAGGGCCTGCGGCCCTCACACAGc > 2:316837/1‑77 (MQ=255) tctTCGCGGGCAAGCCCGCTCCTAC‑ACCGTCGTAGGAGCGGGTTTACCCGCGAAAGGGCCTGCGGCCCTCACACAGCGACCAGCGCTTTCAACGCCCCATc > 1:2256162/1‑101 (MQ=255) tctTCGCGGGCAAGCCCGCTCCTAC‑ACCGTCGTAGGAGCGGGTTTACCCGCGAAAGGGCCTGCGGCCCTCACACAGCGACCAGCGCTTTCAACGCCCCATCCAGGTCCTCGACCAGGTCACGGTAATCTTCGATCCCTACCGACAACCgc > 1:2619987/1‑150 (MQ=255) tctTCGCGGGCAAGCCCGCTCCTAC‑ACCGTCGTAGGAGCGGGTTTACCCGCGAAAGGGCCTGCGGCCCTCACACAGCGACCAGCGCTTTCAACGCCCCATCCAGGTCCTCGACCAGGTCACGGTAATCCTCGATCCCTACCGACAACCgc < 1:1705413/150‑1 (MQ=255) ttCGCGGGCAAGCCCGCTCCTAC‑ACCGTCGTAGGAGCGGGTTTACCCGCGAAAGGGCCTGCGGCCCTCACACAGCGACCAGCGCTTTCAACGCCCCATCCAGGTCCTCGACCAGGTCACGGTAATCCTCGATCCCTACCGACAACCgcag < 1:310620/150‑1 (MQ=255) gcgGGCAAGCCCGCTCCTAC‑ACCGTCGTAGGAGCGGGTTTACCCGCGAAAGGGCCTGCGGCCCTCACACAGCGACCAGCGCTTTCAACGCCCCATCCAGGTCCTCGACCAGGTCACGGTAATCCTCGATCCCTACCGACAACCGcagcag < 2:2426410/150‑1 (MQ=255) cAAGCCCGCTCCTAC‑ACCGTCGTAGGAGCGGGTTTCCCCGCGAAAGGGCCTGCGGCCCTCACACAGCGACCAGCGCTTTCAACGCCCCATCCAGGTCCTCGACCAGGTCACGGTAATCCTCGATCCCTACCGACAACCGCAGCAGGTtct < 1:1527790/150‑1 (MQ=255) aaacccGCTCCTAC‑GACGGTGTAGGAGCGGGCTTGCCCGCGAAAGGGCCTGCGGCCCTCACACAGCGACCAGCGCTTTCAACGCCCCATCCAGGTCCTCGACCAGGTCACGGTAATCCTCGATCCCTACCGACAACCGCAGCAGGTtctc > 1:2114323/4‑150 (MQ=38) aaGCCCGCTCCTAC‑ACCGTCGTAGGAGCGGGTTTACCCGCGAAAGGGCCTGCGGCCCTCACACAGCGACCAGCGCTTTCAACGCCCCATCCAGGTCCTCGACCAGGTCACGGTAATCCTCGATCCCTACCGACAACCGCAGCAGGTtctc > 1:654954/1‑150 (MQ=255) aacccGCTCCTAC‑GACGGTGTAGGAGCGGGTTTACCCGCGAAAGGGCCTGCGGCCCTCACACAGCGACCAGCGCTTTCAACGCCCCATCCAGGTCCTCGACCAGGTCACGGTAATCCTCGATCCCTACCGACAACCGCAGCAGGtt < 1:796690/144‑1 (MQ=255) cccGCTCCTACGACGGT‑GTAGGAGCGGGTTTACCCGCGAAAGGGCCTGCGGCCCTCACACAGCGACCAGCGCTTTCAACGCCCCATCCAGGTCCTCGACCAGGTCACGGTAATCCTCGATCCCTACCGACAACCGCAGCAGGTTCTCGCt > 1:1772011/1‑150 (MQ=255) ccGCTCCTACGACGGT‑GTAGGAGCGGGTTTACCCGCGAAAGGGCCTGCGGCCCTCACACAGCGACCAGCGCTTTCAACGCCCCATCCAGGTCCTc < 2:550134/95‑1 (MQ=38) ccGCTCCTACGACGGT‑GTAGGAGCGGGTTTACCCGCGAAAGGGCCTGCGGCCCTCACACAGCGACCAGCGCTTTCAACGCCCCATCCAGGTCCTc > 1:550134/1‑95 (MQ=38) ccGCTCCTACGACGGT‑GTAGGAGCGGGTTTACCCGCGAAAGGGCCTGCGGCCCTCACACAGCGACCAGCGCTTTCAACGCCCCATCCAGGTCCTCGACCa > 2:2604640/1‑100 (MQ=38) ccGCTCCTAC‑GACGGTGTAGGAGCGGGTTTACCCGCGAAAGGGCCTGCGGCCCTCACACAGCGACCAGCGCTTTCAACGCCCCATCCAGGTCCTCGACCAGGTCACg > 1:1548069/1‑107 (MQ=38) cTCCTAC‑ACCGGCGTAGGAGCGGGTTTACCCGCGAAAGGGCCTGCGGCCCTCACACAGCGACCAGCGCTTTCAACGCCCCATCCAGGTCCTCGACCAGGTCACGGTAATCCTCGATCCCTACCGACAACCGCAGCAGGTTCTCGCTGATc < 2:372909/150‑1 (MQ=255) cTAC‑ACCGTCGTAGGAGCGGGTTTACTCGCGAAAGGGCCTGCGGCCCTGACACAGCGACCAGCGCATTCAACGCCCCATCCAGAACCTCGACCAGGTCACGGTAATCCACGATCACTACCGACAACAGCAGCAGGTTCTCACTGATtccc > 2:2178082/1‑150 (MQ=255) cTAC‑ACCGTCGTAGGAGCGGGTTTACCCGCGAAAGGGCCTGCGGCCCTCACACAGCGACCAGCGCTTTCAACGCCCCATCCAGGTCCTCGACCAGGTCACGGTAATCCTCGATCCCTACCGACAACCGCAGCAGGTTCTCGCTGATcccc > 1:71923/1‑150 (MQ=255) ac‑acCGTCGTAGGAGCGGGTTTACCCGCGAAAGGGCCTGCGGCCCTca < 2:1613819/48‑1 (MQ=255) ac‑acCGTCGTAGGAGCGGGTTTACCCGCGAAAGGGCCTGCGGCCCTca > 1:1613819/1‑48 (MQ=255) ac‑acCGTCGTAGGAGCGGGTTTACCCGCGAAAGGGCCTGCGGCCCTCACACAGCGACCAGCGCTTTCAACGCCCCATCCAGGTCCTCGACCAGGTCACGGTAATCCTCGATCCCTACCGACAACCGCAGCAGGTTCTCGCTGATCCCCAt > 1:1671762/1‑150 (MQ=255) c‑acCGTCGTAGGAGCGGGTTTACCCGCGAAAGGGCCTGCGGCCCTCACACAGCGACCAGCGCTTTCAACGCCCCATCCAGGTCCTCGACCAGGTCACGGTAATcc < 1:272797/105‑1 (MQ=255) acCGTCGTAGGAGCGGGTTTACCCGCGAAAGGGCCTGCGGCCCTCACACAGCGACCAGTGCTTTCAACGCCCCATCCAGGTCCTCGACCAGGTCACGGTAATCCTCGATCCCTACCGACAACCGCAGCAGGTTCTCGCTGATCCCCATCa > 1:51192/1‑150 (MQ=255) acCGTCGTAGGAGCGGGTTTACCCGCGAAAGGGCCTGCGGCCCTCACACAGCGACCAGCGCTTTCAACGCCCCATCCAGGTCCTCGACCAGGTCACGGTAATCCTCGATCCCTACCGACAACCGCAGCAGGTTCTCGc > 2:260153/1‑138 (MQ=255) acCGTCGTAGGAGCGGGTTTACCCGCGAAAGGGCCTGCGGCCCTCACACAGCGACCAGCGCTTTCAACGCCCCATCCAGGTCCTCGACCAGGTCACGGTAATCCTCGATCCCTACCGACAACCGCAGCAGGTTCTCGc < 1:260153/138‑1 (MQ=255) cgtcgtAGGAGCGGGTTTACCCGCGAAAGGGCCTGCGGCCCTCACACAGCGACCAGCGCTTTCAACGCCCCATCCAgg < 2:776033/78‑1 (MQ=255) aacgtACGAGCGGGTTTACCCGCGAAATGGCCTGCGGCCCTCACACAGCGACCAGCGCTTTCAACGCCCCATCCAGGTCCTCGACCAGGTCACGGTAATCCTCGATCCCTACCGACAACCGCAGCAGGTTCTCGCTGATCCCCATCAccc > 2:820678/3‑150 (MQ=255) | GGCACCAACGACGAAGCCGTCAACCGCCTGCGCAAGGAAAGGTTGCTGATCAAGGACAAGATCGAACGGATCATTCATCCGCCCAAATCCTGACAGGCATCTATTGAATCCACCGGCCTCTTCGCGGGCAAGCCCGCTCCTAC‑ACCGTCGTAGGAGCGGGTTTACCCGCGAAAGGGCCTGCGGCCCTCACACAGCGACCAGCGCTTTCAACGCCCCATCCAGGTCCTCGACCAGGTCACGGTAATCCTCGATCCCTACCGACAACCGCAGCAGGTTCTCGCTGATCCCCATCACCC > NC_002947/5212392‑5212687 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |