| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 554,155:1 | +C | 5.4% | coding (92/714 nt) | rpsC → | 30S ribosomal protein S3 |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 554,155 | 1 | . | C | 5.4% | 466.3 / 19.2 | 111 | coding (92/714 nt) | rpsC | 30S ribosomal protein S3 |
| Reads supporting (aligned to +/- strand): ref base . (55/50); new base C (2/4); total (57/54) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.30e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.93e-01 | |||||||||||
Only 100 of 114 total aligned reads displayed.
CGTGCCAAAGGCCGTGCTGATCGCATCGTCAAGCGGTCTTGCCATATCACTGTCAAGGTTGCGGACAAGTAACGGAGTCGATCAGATGGGTCAGAAAGTACATCCCACTGGCATTCGCCTGGGAATCGTCAAGGAGCACACCTCCGTCTG‑GTACGCAGACGGTGCTACTTACGCAGATTACCTGTTGAAGGATCTGAAAACGCGTGAGTACCTCCAAGACAAACTAAAAAGCGCGTCCGTAAGCCGTATCGATATTCATCGTCCGGCTCAAACTGCACGCATCACCATCCACACCGCTC > NC_002947/554006‑554304 | cGTGCCAAAGGCCGTGCTGATCGCATCGTCAAGCGGTCTTGCCATATCACTGTCAAGGTTGCGGACAAGTAACGGAGTCGATCAGATGGGTCACAAAGTACATCCCACTGGCATTCGCCTGGGAATCGTCAAGGAGCACACCTCCGTCTg < 2:1985664/150‑1 (MQ=255) gTGCCAAAGGCCGTGCTGATCGCATCGTCAAGCGGTCTTGCCATATCACTGTCAAGGTTGCGGACAAGTAACGGAGTCGATCAGATGGGTCAGAAAGTACATCCCACTGGCATTCGCCTGGGAATCGTCAAGGAGCACACCTCCGTCTg‑g < 1:1393357/150‑1 (MQ=255) aaaGGCCGTGCTGATCGCATCGTCAAGCGGTCTTGCCATATCACTGTCAAGGTTGCGGACAAGTAACGGAGTCGATCAGATGGGTCAGAAAGTACATCCCACTGGTATTCGCCTGGGAATCGTCAAGGAGCACACCTCCGTCTG‑GTACGc > 2:3026514/1‑150 (MQ=255) cGTGCTGATCGCATCGTCAAGCGGTCTTGCCATATCACTGTCAAGGTTGCGGACAAGTAACGGAGTCGATCAGATGGGTCAGAAAGTACATCCCACTGGCATTCGCCTGGGAATCGTCAAGGAGCACACCTCCGTCTG‑GTACGCAGACgg < 1:1766272/150‑1 (MQ=255) tGCTGATCGCATCGTCAAGCGGTCTTGCCATATCACTGTCAAGGTTGCGGACAAGTAACGGAGTCGATCAGATGGGTCAGAAAGTACATCCCACTGGCATTCGCCTGGGAATCGTCAAGGAGCACACCTCCGTCTGCGTAC‑CAGACggag < 2:1469065/150‑3 (MQ=255) tGCTGATCGCATCGTCAAGCGGTCTTGCCATATCACTGTCAAGGTTGCGGACAAGTAACGGAGTCGATCAGATGGGTCAGAAAGTACATCCCACTGGCATTCGCCTGGGAATCGTCAAGGAGCACACCTCCGTCTG‑GTACGCAGACGGTg < 2:970194/150‑1 (MQ=255) cTGATCGCATCGTCAAGCGGTCTTGCCATATCACTGTCAAGGTTGCGGACAAGTAACGGAGTCGATCAGATGGGTCAGAAAGTACATCCCACTGGCATTCGCCTGGGAATCGTCAAGGAGCACACCACCGTCTGCGTAC‑CAGACggaggt < 2:1978742/150‑5 (MQ=255) gATCGCATCGTCAAGCGGTCTTGCCATATCACTGTCAAGGTTGCGGACAAGTAACGGAGTCGATCAGATGGGTCAGAAAGTACATCCCACTGGCATTCGCCTGGGAATTGTCAAGGAGCACACCTCCGTCTG‑GTACGCAGACggag < 1:1380233/146‑3 (MQ=255) gATCGCATCGTCAAGCGGTCTTGCCATATCACTGTCAAGGTTGCGGACAAGTAACGGAGTCGATCAGATGGGTCAGAAAGTACATCCCACTGGCATTCGCCTGGGAATCGTCAAGGAGCACACCTCCGTCTG‑GTACGCAGACGGTGCTa < 2:2643402/149‑1 (MQ=255) gATCGCATCGTCAAGCGGTCTTGCCATATCACTGTCAAGGTTGCGGACAAGTAACGGAGTCGATCAGATGGGTCAGAAAGTACATCCCACTGGCATTCGCCTGGGAATCGTCAAGGAGCACACCTCCGTCTG‑GTACGCAGACGGTGCTa > 1:2643402/1‑149 (MQ=255) tCGCATCGTCAAGCGGTCTTGCCATATCACTGTCAAGGTTGCGGACAAGTAACGGAGTCGATCAGATGGGTCAGAAAGTACATCCCACTGGCATTCGCCTGGGAATCGTCAAGGAGCACACCTCCGTCTG‑GTACGCAGACGGTGCTACtt > 1:476166/1‑150 (MQ=255) gTCAAGCGGTCTTGCCATATCACTGTCAAGGTTGCGGACAAGTAACGGAGTCGATCAGATGGGTCAGAAAGTACATCCCACTGGCATTCGCCTGGGAATCGTCAAGGAGCACACCTCCGTCTG‑GTACGCAGACGGTGCTACTTACGcgga > 1:1159907/1‑147 (MQ=255) gCGGTCTTGCCATATCACTGTCAAGGTTGCGGACAAGTAACGGAGTCGATCAGATGGGTCAGAAAGTACATCCCACTGGCATTCGCCTGGGAATCGTCAAGGAGCACACCTCCGTCTG‑GTACGCAGACGGTGCTACTTACGCAGATTAcc < 1:319339/150‑1 (MQ=255) gTCTTGCCATATCACTGTCAAGGTTGCGGACAAGTAACGGAGTCGATCAGATGGGTCAGAAAGTACATCCCACTGGCATTCGCCTGGGAATCGTCAAGGAGCACACCTCCGTCTG‑GTACGCAGACGGTGCTACTTACGCAGATTACCTGt < 2:390794/150‑1 (MQ=255) ttGCCATATCACTGTCAAGGTTGCGGACAAGTAACGGAGTCGATCAGATGGGTCAGAAAGTACATCCCACTGGCATTCGCCTGGGAATCGTCAAGGAGCACACCTCCGTCTG‑GTACGCAGACGGTGCTACTTACGCAGATTACCTGTTGa < 2:1086437/150‑1 (MQ=255) tGCCATATCACTGTCAAGGTTGCGGACAAGTAACGGAGTCGATCAGATGGGTCAGAAAGTACATCCCACTGGCATTCGCCTGGGAATCGTCAAGGAGCACACCTCCGTCTG‑GTACGCAGACGGTGCTACTTACGCAGATTACCTGTTGaa < 1:522277/150‑1 (MQ=255) ccATATCACTGTCAAGGTTGCGGACAAGTAACGGAGTCGATCAGATGGGTCAGAAAGTACATCCCACTGGCATTCGCCTGGGAATCGTCAAGGAGCACACCTCCGTCTG‑GTACGCAGACGGTGCTACCTACACACATTACCTGTTCaacg > 2:256057/1‑148 (MQ=255) cATATCACTGTCAAGGTTGCGGACAAGTAACGGAGTCGATCAGATGGGTCAGAAAGTACATCCCACTGGCATTCGCCTGGGAATCGTCAAGGAGCACACCTCCGTCTG‑GTACGCAGACGGTGCTACTTACGCAGATTACCTGTTGAAGGa > 2:891085/1‑150 (MQ=255) atatCACTGTCAAGGTTGCGGACAAGTAACGGAGTCGATCAGATGGGTCAGAAAGTACATCCCACTGGCATTCGCCTGGGAATCGTCAAGGAGCACACCTCCGTCTG‑GTACGCAGACGGTGCTACTTACGCAGATTACCTGTTGAAGGAt < 1:502517/150‑1 (MQ=255) tatCACTGTCAAGGTTGCGGACAAGTAACGGAGTCGATCAGATGGGTCAGAAAGTACATCCCACTGGCATTCGCCTGGGAATCGTCAAGGAGCACACCTCCGTCTG‑GTACGCAGACGGTGCTACTTACGCAGATTACCTGTTGAAGGATc < 1:2355273/150‑1 (MQ=255) atCACTGTCAAGGTTGCGGACAAGTAACGGAGTCGATCAGATGGGTCAGAAAGTACATCCCACTGGTATTCGCCTGGGAATCGTCAAGGAGCACACCTCCGTCTG‑GTa < 2:1428585/108‑1 (MQ=255) atCACTGTCAAGGTTGCGGACAAGTAACGGAGTCGATCAGATGGGTCAGAAAGTACATCCCACTGGTATTCGCCTGGGAATCGTCAAGGAGCACACCTCCGTCTG‑GTa > 1:1428585/1‑108 (MQ=255) tCACTGTCAAGGTTGCGGACAAGTAACGGAGTCGATCAGATGGGTCAGAAAGCACATCCCACTGGCATTAGCCTGGGAATCGTCAAGGAGCACACCTCCGTCTG‑GTACGCAGACGGTGCTACTTACGTAGATTACCGGTTGAAGGATATg > 1:690854/1‑150 (MQ=255) aCTGTCAAGGTTGCGGACAAGTAACGGAGTCGATCAGATGGGTCAGAAAGTACATCCCACTGGCATTCGCCTGGGAATCGTCAAGGAGCACACCTCCGTCTG‑GTACGCAGACGGTg < 2:1315512/116‑1 (MQ=255) aCTGTCAAGGTTGCGGACAAGTAACGGAGTCGATCAGATGGGTCAGAAAGTACATCCCACTGGCATTCGCCTGGGAATCGTCAAGGAGCACACCTCCGTCTG‑GTACGCAGACGGTg > 1:1315512/1‑116 (MQ=255) gTCAAGGTTGCGGACAAGTAACGGAGTCGATCAGATGGGTCAGAAAGTACATCCCACTGGTATTCGCCTGGGAATCGTCAAGGAGCACACCTCCGTCTG‑GTACGCAGACGGTGCTACTTACGCAGATTACCTGTTGAAGGATCTGAAAAc < 1:3026514/150‑1 (MQ=255) gTCAAGGTTGCGGACAAGTAACGGAGTCGATCAGATGGGTCAGAAAGTACATCCCACTGGCATTCGCCTGGGAATCGTCAAGGAGCACACCTCCGTCTG‑GTACGCAGACGGTGATACTTACGCAGATTACCTGTTGAAGGATCTGAAAAc < 2:1650792/150‑1 (MQ=255) tCAAGGTTGCGGACAAGTAACGGAGTCGATCAGATGGGTCAGAAAGTACATCCCACTGGCATTCGCCTGGGAATCGTTAAGGAGCACACCTCCGTCTG‑GTACGCAGAc < 1:2918124/108‑1 (MQ=255) tCAAGGTTGCGGACAAGTAACGGAGTCGATCAGATGGGTCAGAAAGTACATCCCACTGGCATTCGCCTGGGAATCGTCAAGGAGCACACCTCCGTCTG‑GTACGCAGACgg < 2:1088984/110‑1 (MQ=255) tCAAGGTTGCGGACAAGTAACGGAGTCGATCAGATGGGTCAGAAAGTACATCCCACTGGCATTCGCCTGGGAATCGTCAAGGAGCACACCTCCGTCTG‑GTACGCAGACgg > 1:1088984/1‑110 (MQ=255) tCAAGGTTGCGGACAAGTAACGGAGTCGATCAGATGGGTCAGAAAGTACATCCCACTGGCATTCGCCTGGGAATCGTCAAGGAGCACACCTCCGTCTG‑GTACGCAGACGGTGCTACTTACGCAGATTACCTGTTGAAGGATCTGAAAAcg > 2:2089078/1‑150 (MQ=255) tCAAGGTTGCGGACAAGTAACGGAGTCGATCAGATGGGTCAGAAAGTACATCCCACTGGCATTCGCCTGGGAATCGTCAAGGAGCACACCTCCGTCTG‑GTACGCAGACGGTGCTACTTACGCAGATTACCTGTTGAAGGATCTGAAAAcg > 1:212243/1‑150 (MQ=255) cAAGGTTGCGGACAAGTAACGGAGTCGATCAGATGGGTCAGAAAGTACATCCCACTGGCATTCGCCTGGCAATCGTCAAGGAGCACACCTCCGTCTG‑GTACGCAGACGGTGCTACTTACGCAGATTACCTGTTGAAGGATCTGAAAAcgc < 1:1906062/150‑1 (MQ=255) aaGGTTGCGGACAAGTAACGGAGTCGATCAGATGGGTCAGAAAGTACATCCCACTGGCATTCGCCTGGGAATCGTCAAGGAGCACACCTCCGTCTG‑GTACGCAGACGGTGCTACTTACGCAGATTACCTGTTGAAGGATCTGAAAAcgcg < 2:2564876/150‑1 (MQ=255) aaGGTTGCGGACAAGTAACGGAGTCGATCAGATGGGTCAGAAAGTACATCCCACTGGCATTCGCCTGGGAATCGTCAAGGAGCACACCTCCGTCTG‑GTACGCAGACGGTGCTACTTACGCAGATTACCTGTTGAAGGATCTGAAAAcgcg > 1:284798/1‑150 (MQ=255) aaGGTTGCGGACAAGTAACGGAGTCGATCAGATGGGTCAGAAAGTACATCCCACTGGCATTCGCCTGGGAATCGTCAAGGAGCACACCTCCGTCTG‑GTACGAAGACGGTGCTGCTTACGCAGATTACCTGTTGAAGGATCTGAAAAcgcg > 1:662873/1‑150 (MQ=255) gTTGCGGACAAGTAACGGAGTCGATCAGATGGGTCAGAAAGTACATCCCACTGGCATTCGCCTGGGAATCGTCAAGGAGCACACCTCCGTCTG‑GTACGCAGACGGTGCTACTTACGCAGATTACCt > 1:1116555/1‑126 (MQ=255) gTTGCGGACAAGTAACGGAGTCGATCAGATGGGTCAGAAAGTACATCCCACTGGCATTCGCCTGGGAATCGTCAAGGAGCACACCTCCGTCTG‑GTACGCAGACGGTGCTACTTACGCAGATTACCt < 2:1116555/126‑1 (MQ=255) tGCGGACAAGTAACGGAGTCGATCAGATGGGTCAGAAAGTACATCCCACTGGCATTCGCCTGGGAATCGTCAAGGAGCACACCTCCGTCTT‑GTACGCAGACGGTTCTACTTACGCATATTACCTGTTGAAGGATCTGAAAACGCGTGAGt < 2:212243/150‑1 (MQ=255) ggACAAGTAACGGAGTCGATCAGATGGGTCAGAAAGTACATCCCACTGGCATTCGCCTGGGAATCGTCAAGGAGCACACCTCCGTCTG‑GTACGCAGACGGTGCTACTTACGCAGATTACCTGtt > 1:2116363/1‑124 (MQ=255) ggACAAGTAACGGAGTCGATCAGATGGGTCAGAAAGTACATCCCACTGGCATTCGCCTGGGAATCGTCAAGGAGCACACCTCCGTCTG‑GTACGCAGACGGTGCTACTTACGCAGATTACCTGTTGAAGGATCTGAAAACGCGTGAGTAcc > 2:2050624/1‑150 (MQ=255) gTAACGGAGTCGATCAGATGGGTCAGAAAGTACAACCCACTGGCATTCGCCTGGGAATCGTCAAGGAGCACACCTCCGTCTG‑GTACGCAGACGGTGCTACTTACGCAGATTACCTTTTCACGGCTCTGAAAACGCGTGAGTACATCCAAg > 2:586279/1‑150 (MQ=255) tAACGGAGTCGATCAGATGGGTCAGAAAGTACATCCCACTGGCATTCGCCTGGGAATCGTCAAGGAGCACACCTCCGTCTG‑GTACGCAGACGGTGCTACTTACGCAGATTACCTg < 1:1096724/115‑1 (MQ=255) tAACGGAGTCGATCAGATGGGTCAGAAAGTACATCCCACTGGCATTCGCCTGGGAATCGTCAAGGAGCACACCTCCGTCTG‑GTACGCAGACGGTGCTACTTACGCAGATTACCTg > 2:1096724/1‑115 (MQ=255) tAACGGAGTCGATCAGATGGGTCAGAAAGTACATCCCACTGGCATTCGCCTGGGAATCGTCAAGGAGCACACCTCCGTCTG‑GTACGCAGACGGTGCTACTTACGCAGATTACCTGTTGAAGGATCTGAAAACGCGTGAGTACCTCCAAGa < 1:1266067/150‑1 (MQ=255) aCGGAGTCGATCAGATGGGTCAGAAAGTACATCCCACTGGCATTCGCCTGGGAATCGTCAAGGAGCACACCTCCGTCTG‑GTACGCAGACGGTGCTACTTACGCAGATTACCTGTTGAAGGATCTGAAAACGCGt > 1:2571502/1‑134 (MQ=255) aCGGAGTCGATCAGATGGGTCAGAAAGTACATCCCACTGGCATTCGCCTGGGAATCGTCAAGGAGCACACCTCCGTCTG‑GTACGCAGACGGTGCTACTTACGCAGATTACCTGTTGAAGGATCTGAAAACGCGt < 2:2571502/134‑1 (MQ=255) gATCAGATGGGTCAGAAAGTTCATCCCACTGGCATTCGCCTGGGAATCGTCAAGGAGCACACCTCCGTCTG‑GTACGCAGACGGTGCTACTTACGCAGATTACCTGTTGAAGGATCTGAAAACGCGTGAGTACCTCCAAGACAAACTaaaa > 2:1390107/1‑150 (MQ=255) aTCAGATGGGTCAGAAAGTACATCCCCGGTGTATTCGCCTGGGAATCGTCAAGGAGCACACCTCCGTCTG‑GTACGCAGACGGTGCTGCTTACGCAGATTACCTGTTGAAGGATCTGAAAACGCGTGAGTACCTCCAAGACAAACTaaaaa < 2:662873/150‑1 (MQ=255) aTCAGATGGGTCAGAAAGTACATCCCACTGGCATTCGCCTGGGAATCGTCAAGGAGCACACCTCCGTCTG‑GTACGCAGACGGTGCTACTTACGCAGATTACCTGTTGAAGGATCTGAAAACGCGTGAGTACCTCCAAGACAAACTaaaaa < 1:1987651/150‑1 (MQ=255) aTCAGATGGGTCAGAAAGTACATCCCACTGGCATTCGCCTGGGAATCGTCAAGGAGCACACCTCCGTCTG‑GTACGCAGACGGTGCTACTTACGCAGATTACCTGTTGAAGGATCTGAAAACGCGTGAGTACCTCCAAGACAAACTaaaaa > 2:1987651/1‑150 (MQ=255) aTCAGATGGGTCAGAAAGTACATCCCACTGGCATTCGCCTGGGAATCGTCAAGGAGCACACCTCCGTCTG‑GTACGCAGACGGTGCTACTTACGCAGATTACCTGTTGAAGGATCTGAAAACGCGTGAGTACCTCCAAGACAAACTaaaaa < 1:1046016/150‑1 (MQ=255) gATGGGTCAGAAAGTACATCCCACTGGCATTCGCCTGGGAATCGTCAAGGAGCACACCTCCGTCTG‑GTACGCAGACGGTGCTACTTACGCAGATTACCTGTTGAAGGATCTGAAAACGCGTGAGTACCTCCAAGACAAACTAAAAAgcgc < 1:586279/150‑1 (MQ=255) tGGGTCAGAAAGTTCATCCCACTGGCATTCGCCTGGGAATCGTCAAGGAGCACACCTCCGTCTG‑GTACGCAGACGGTGCTACTTACGCAGATTACCTGTTGAAGGATCTGAAAACGCGTGAGTACCTCCAAGACAAACTAAAAAGCGCGt < 1:1390107/150‑1 (MQ=255) ggTCAGAAAGTACATCCCACTGGCCTTCAGGCGGGAATCGTCAAGGAGCACACCTCCGTCTG‑GTACGCAGACGGTGCTACTTACGCAGATTACCTGTTGAAGGATCTGAAAACGCGTGAGTACCTCCAAGACAAACTAAAAAGCGCGTcc > 1:2384405/1‑150 (MQ=255) ggTCAGAAAGTACATCCCACTGGCATTCGCCTGGGAATCGTCAAGGAGCACACCTCCGTCTG‑GTACGCAGACGGTGCTACTTACGCAGATTACCTGTTGAAGGATCTGAAAACGCGTGAGTACCTCCAAGACAAACTAAAAAGCGCGTcc < 1:1759449/150‑1 (MQ=255) tCAGAAAGTACATCCCACTGGCATTCGCCTGGGAATCGTCAAGGAGCACACCTCCGTCTG‑GTACGCAGACGGTGCTACTTACGCAGATTACCTGTTGAAGGATCTGAAAACGCGTGAGTACCTCCAAGACAAACTAAAAAgcgc < 1:2323067/144‑1 (MQ=255) tCAGAAAGTACATCCCACTGGCATTCGCCTGGGAATCGTCAAGGAGCACACCTCCGTCTG‑GTACGCAGACGGTGCTACTTACGCAGATTACCTGTTGAAGGATCTGAAAACGCGTGAGTACCTCCAAGACAAACTAAAAAgcgc > 2:2323067/1‑144 (MQ=255) tCAGAAAGTACATCCCACTGGCATTCGCCTGGGAATCGTCAAGGAGCACACCTCCGTCTG‑GTACGCAGACGGTGCTACTTACGCAGATTACCTGTTGAAGGATCTGAAAACGCGTGAGTACCTCCAAGACAAACTAAAAAGCGCGTCCGt > 2:2848780/1‑150 (MQ=255) tCAGAAAGTACATCCCACTGGCATTCGCCTGGGAATCGTCAAGGAGCACACCTCCGTCTG‑GTACGCAGACGGTGCTACTTACGCAGATTACCTGTTGAAGGATCTGAAAACGCGTGAGTACCTCCAAGACAAACTAAAAAGCGCGTCCGt > 1:1393119/1‑150 (MQ=255) gAAAGTACATCCCACTGGCATTCGCCTGGGAATCGTCAAGGAGCACACCTCCGTCTG‑GTACGCAGACGGTGCTACTTACGCAGATTACCTGTTGAAGGATCTGAAAACGCGt < 2:2307538/112‑1 (MQ=255) gAAAGTACATCCCACTGGCATTCGCCTGGGAATCGTCAAGGAGCACACCTCCGTCTG‑GTACGCAGACGGTGCTACTTACGCAGATTACCTGTTGAAGGATCTGAAAACGCGt > 1:2307538/1‑112 (MQ=255) gAAAGTACATCCCACTGGCATTCGCCTGGGAATCGTCAAGGAGCACACCTCCGTCTG‑GTACGCAGACGGTGCTACTTACGCAGATTACCTGTTGAAGGATCTGAAAACGCGTGAGTACCTCCAAGACAAACTAAAAAGCGCGTCCGTAAg > 2:2507801/1‑150 (MQ=255) aaaGTACATCCCACTGGCATTCGCCTGGGAATCGTCAAGGAGCACACCTCCGTCTG‑GTACGCAGACGGTGCTACTTACGCAGATTACCTGTTGAAGGATCTGAAAACGCGTGAGTACCTCCAAGACAAACTAAAAAGCGCGTCCGTAAGc > 2:2343647/1‑150 (MQ=255) aaGTACATCCCACTGGCATTCGCCTGGGAATCGTCAAGGAGCACACCTCCGTCTG‑GTACGCAGACGGTGCTACTTACGCAGATTACCTGTTGAAGGATCTGAAAACGCGTGAGTACCTCCAAGACAAACTAAAAAGCGCGTCCGTAAGcc < 1:256057/150‑1 (MQ=255) gTACATCCCACTGGCATTCGCCTGGGAATCGTCAAGGAGCACACCTCCGTCTG‑GTACGCAGACGGTGCTACTTACGCAGATTACCTGTTGAAGGATCTGAAAACGCGTGAGTACCTCCAAGACAAACTAAAAAGCGCGTCCGTAAGCCGt < 1:2848780/150‑1 (MQ=255) cccACTGGCATTCGCCTGGGAATCGTCAAGGAGCACACCTCCGTCTG‑GTACGCAGACGGTGCTACTTACGCAGATTACCTGTTGAAGGATCTGAAAACGCGTGAGTACCTCCAAGACAAACTAAAAAGCGCGTCCGTAAGCCGTATCGat > 2:2426300/1‑150 (MQ=255) ccACTGGCATTCGCCTGGGAATCTTCAAGGAGCACACCTCCGTCTG‑GTACGCAGACGGTGCTACTTACGCAGATTACCTGTTCCCGGTTCTGAAAACGCGTGAGTACCTCCAAGACAAACTAAAAAGCGCGTCCGTAAGCCGTATCGata > 2:94393/1‑150 (MQ=255) aCTGGCATTCGCCTGGGAATCGTCAAGGAGCACACCTCCGTCTG‑GTACGCAGACGGTGCTACTTACGCAGATTACCTGTTGAAGGATCTGAAAACGCGTGAGTACCTc < 2:139/108‑1 (MQ=255) aCTGGCATTCGCCTGGGAATCGTCAAGGAGCACACCTCCGTCTG‑GTACGCAGACGGTGCTACTTACGCAGATTACCTGTTGAAGGATCTGAAAACGCGTGAGTACCTc > 1:139/1‑108 (MQ=255) tGGCATTCGCCTGGGAATCGTCAAGGAGCACACCTCCGTCTG‑GTACGCAGACGGTGCTACTTACGCAGATTACCTGTTGAAGGATCTGAAAACGCGTGAGTACCTCCAAGACAAACTAAAAAGCGCGTCCGTAAGCCGTATCGATATTCa < 1:2050624/150‑1 (MQ=255) ggCATTCGCCTGGGAATCGTCAAGGAGCACACCTCCGTCTG‑GTACGCAGACGGTGCTACTTACGCAGATTACCTGTTGAAGGATCTGAAAACGCGTGa > 1:1479076/1‑98 (MQ=255) ggCATTCGCCTGGGAATCGTCAAGGAGCACACCTCCGTCTG‑GTACGCAGACGGTGCTACTTACGCAGATTACCTGTTGAAGGATCTGAAAACGCGTGa < 2:1479076/98‑1 (MQ=255) aTTCGCCTGGGAATCGTCAAGGAGCACACCTCCGTCTG‑GTACGCAGACGGTGCTACTTACGCAGATTACCTGTTGAAGGATCTGAAAACGCGTGAGTACCTCCAAGACaaa < 2:2474267/111‑1 (MQ=255) aTTCGCCTGGGAATCGTCAAGGAGCACACCTCCGTCTG‑GTACGCAGACGGTGCTACTTACGCAGATTACCTGTTGAAGGATCTGAAAACGCGTGAGTACCTCCAAGACAAACTAAAAAGCGCGTCCGTAAGcc < 1:3019541/133‑1 (MQ=255) aTTCGCCTGGGAATCGTCAAGGAGCACACCTCCGTCTG‑GTACGCAGACGGTGCTACTTACGCAGATTACCTGTTGAAGGATCTGAAAACGCGTGAGTACCTCCAAGACAAACTAAAAAGCGCGTCCGTAAGcc > 2:3019541/1‑133 (MQ=255) aTTCGCCTGGGAATCGTCAAGGAGCACACCTCCGTCTG‑GTACGCAGACGGTGCTACTTACGCAGATTACCTGTTGAAGGATCTGAAAACGCGTGAGTACCTCCAAGACAAACTAAAAAGCGCGTCCGTAAGCCGTATCGATATTCATCGt > 2:641380/1‑150 (MQ=255) tCGCCTGGGAATCGTCAAGGAGCACACCTCCGTCTG‑GTACGCAGACGGTGCTACTTACGCAGATTACCTGTTGAAGGATCTGAAAACGCGTGAGTACCTCCAAGACAAACTAAAAAGCGCGTCCGTAAGCCGTATCGATATTCATCGTcc < 2:1749265/150‑1 (MQ=255) gggAATCGTCAAGGAGCACACCTCCGTCTG‑GTACGCAGACGGTGCTACTTACGCAGATTACCTGTTGAAGGATCTGAAAACGCGTGAGTACCTCCAAGACAAACTAAAAAGCGCGTCCGTAAGCCGTATCGATATTCATCGTCCGGCTCa > 2:2031466/1‑150 (MQ=255) aaTCGTCAAGGAGCACACCTCCGTCTG‑GTACGCAGACGGTGCTACTTACGCAGATTACCTGTTGAAGGATCTGAAAACGCGTGa > 1:31694/1‑84 (MQ=255) aaTCGTCAAGGAGCACACCTCCGTCTG‑GTACGCAGACGGTGCTACTTACGCAGATTACCTGTTGAAGGATCTGAAAACGCGTGa < 2:31694/84‑1 (MQ=255) aTCGTCAAGGAGCACACCTCCGTCTG‑GTACGCAGACGGTGCTACTTACGCAGATTACCTGTTGAAGGATCTGAAAACGCGTGAGTACCTCCAAGACAAACTAAAAAGCGCGTCCGTAAGCCGTATCGATATTCATCGTCCGGCTCAAACt > 1:1984036/1‑150 (MQ=255) tCGTCAAGGAGCACACCTCCGTCTG‑GTACGCAGACGGTGCTACTTACGCAGATTACCTGTTGAAGGATCTGAAAACGCGTGAGTACCTCCAAGACAAACTAAAAAGCGCGTCCGTAAGCAGTATAGATATTCATCGTCCGGCTCAAACTg > 1:956749/1‑150 (MQ=255) cGTCAAGGAGCACACCTCCGTCTG‑GTACGCAGACGGTGCTACTTACGCAGATTACCTGTTGAAGGATCTGAAAACGCGTGAGTACCTCCAAGACAAACTAAAAAGCGCGTCCGTAAGCCGTATCGATATTCATCGTCCGGCTCAAACTGc < 1:2426300/150‑1 (MQ=255) tCAGGGAGCACACCTCCGTCTG‑GTACGCAGACGGTGCTACTTACGCAGATTACCTGTTGAAGGATCTGAAAACGCGTGAGTACCTCCAAGACAAACTAAAAAGCGCGTCCGTAAGCCGTATCGATATTCATCGTCCGGCTCAAACTGCAc > 2:792593/1‑150 (MQ=255) cAAGGAGCACACCTCCGTCTG‑GTACGCAGACGGTGCTACTTACGCAGATTACCTGTTGAAGGATCTGAAAACGCGTGAGTACCTCCAAGACAAACTAAAAAGCGCGTCCGTAAg < 2:1319173/114‑1 (MQ=255) cAAGGAGCACACCTCCGTCTG‑GTACGCAGACGGTGCTACTTACGCAGATTACCTGTTGAAGGATCTGAAAACGCGTGAGTACCTCCAAGACAAACTAAAAAGCGCGTCCGTAAg > 1:1319173/1‑114 (MQ=255) aaGGAGCACACCTCCGTCTG‑GTACGCAGACGGTGCTACTTACGCAGATTACCTGTTGAAGGATCTGAAAACGCGTGAGTACCTCCAAGACAAACTAAAAAGCGCGTCCGTAAGCCGTATCGATATTCATCGTCCGGCTc < 2:1354972/139‑1 (MQ=255) aaGGAGCACACCTCCGTCTG‑GTACGCAGACGGTGCTACTTACGCAGATTACCTGTTGAAGGATCTGAAAACGCGTGAGTACCTCCAAGACAAACTAAAAAGCGCGTCCGTAAGCCGTATCGATATTCATCGTCCGGCTCAAACTGCACGc > 2:2853613/1‑150 (MQ=255) acacCTCCGTCTG‑GTACGCAGACGGTGCTACTTACGCAGATTACCTGTTGAAGGATCTGAAAACGCGTGAGTACCTCCAAGACAAACTAAAAAGCGCGTCCGTAAGCCGTATCGATATTCATCGTCCGGCTCAAACTGCACGCATCACCa > 1:637027/1‑150 (MQ=255) acacCTCCGTCTG‑GTACGCAGACGGTGCTACTTACGCAGATTACCTGTTGAAGGATCTGAAAACGCGTGAGTACCTCCAAGACAAACTAAAAAGCGCGTCCGTAAGCCGTATCGATATTCATCGTCCGGCTCAAACTGCACGCATCACCa < 1:3020869/150‑1 (MQ=255) cacCTCCGTCTG‑GTACGCAGACGGTGCTATTTACGCAGATTACCTGTTGAAGGATCTGAAAACGCGTGAGTACCTCCAAGACAAACTAAAAAGCGCTTCCGTAAGCCGTATCGATATTCATCGTCCGGCTCAAACTGCACGCATCACCAt < 2:690854/150‑1 (MQ=255) acCTCCGTCTG‑GTACGCAGACGGTGCTACTTACGCAGATTACCTGTTGAAGGATCTGAAAACGCGTGAGTACCTCCAAGACAAACTAAAAAGCGCGTCCGTAAGCCGTATCGATATTCATCg < 2:436253/122‑1 (MQ=255) caccGTCTGCGTAC‑CAGACGGTGCTACTTACGCAGATTACCTGTTGAAGGATCTGAAAACGCGTGAGTACCTCCAAGACAAACTaaaa < 2:422886/86‑1 (MQ=255) caccGTCTGCGTAC‑CAGACGGTGCTACTTACGCAGATTACCTGTTGAAGGATCTGAAAACGCGTGAGTACCTCCAAGACAAACTaaaa > 1:422886/3‑88 (MQ=255) caccGTCTGCGTAC‑CAGACGGTGCTACTTACGCAGATTACCTGTTGAAGGATCTGAAAACGCGTGAGTACCTCCAAGACAAACTAAAAAGCGCGTCCGTAAGCCGTATc < 2:1959240/107‑1 (MQ=255) caccGTCTGCGTAC‑CAGACGGTGCTACTTACGCAGATTACCTGTTGAAGGATCTGAAAACGCGTGAGTACCTCCAAGACAAACTAAAAAGCGCGTCCGTAAGCCGTATc > 1:1959240/3‑109 (MQ=255) cTCCGTCTG‑GTACGCAGACGGTGCTACTTACGCAGATTACCTGTTGAAGGATCTGAAAACGCGTGAGTACCTCCAAGACAAAc < 2:2762676/83‑1 (MQ=255) cTCCGTCTG‑GTACGCAGACGGTGCTACTTACGCAGATTACCTGTTGAAGGATCTGAAAACGCGTGAGTACCTCCAAGACAAAc > 1:2762676/1‑83 (MQ=255) cTCCGTCTG‑GTACGCAGACGGTGCTACTTACGCAGATTACCTGTTGAAGGATCTGAAAACGCGTGAGTACCTCCAAGACAAACTAAAAAGCGCGTCCGTAAGCCGTATCGATATTCATCGTCCGGCTCAAACTGCACGCATCACCATCca > 1:2638397/1‑150 (MQ=255) | CGTGCCAAAGGCCGTGCTGATCGCATCGTCAAGCGGTCTTGCCATATCACTGTCAAGGTTGCGGACAAGTAACGGAGTCGATCAGATGGGTCAGAAAGTACATCCCACTGGCATTCGCCTGGGAATCGTCAAGGAGCACACCTCCGTCTG‑GTACGCAGACGGTGCTACTTACGCAGATTACCTGTTGAAGGATCTGAAAACGCGTGAGTACCTCCAAGACAAACTAAAAAGCGCGTCCGTAAGCCGTATCGATATTCATCGTCCGGCTCAAACTGCACGCATCACCATCCACACCGCTC > NC_002947/554006‑554304 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |